RNA–Protein interactions for RNA: ENST00000558052.1

SLTM-214, Transcript of SAFB like transcription modulator, humanhuman

TSL 2

Gene SLTM, Length 806 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-214ENST00000558052 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
SLTM-214ENST00000558052 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
SLTM-214ENST00000558052 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
SLTM-214ENST00000558052 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
SLTM-214ENST00000558052 FOXD1Q16676 465 aa16.25■□□□□ 0.19
SLTM-214ENST00000558052 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
SLTM-214ENST00000558052 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
SLTM-214ENST00000558052 MSH5O43196 834 aa15.21■□□□□ 0.03
SLTM-214ENST00000558052 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
SLTM-214ENST00000558052 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
SLTM-214ENST00000558052 ADRA2BP18089 450 aa15.09■□□□□ 0.01
SLTM-214ENST00000558052 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
SLTM-214ENST00000558052 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
SLTM-214ENST00000558052 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
SLTM-214ENST00000558052 SCAF1Q9H7N4 1312 aaKnown RBP13.8□□□□□ -0.2
SLTM-214ENST00000558052 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
SLTM-214ENST00000558052 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
SLTM-214ENST00000558052 ABCC9O60706 1549 aa13.47□□□□□ -0.25
SLTM-214ENST00000558052 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
SLTM-214ENST00000558052 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
SLTM-214ENST00000558052 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
SLTM-214ENST00000558052 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
SLTM-214ENST00000558052 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
SLTM-214ENST00000558052 RNF39Q9H2S5 420 aa13□□□□□ -0.33
SLTM-214ENST00000558052 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
SLTM-214ENST00000558052 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
SLTM-214ENST00000558052 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
SLTM-214ENST00000558052 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
SLTM-214ENST00000558052 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
SLTM-214ENST00000558052 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
SLTM-214ENST00000558052 NACADO15069 1562 aa12.79□□□□□ -0.36
SLTM-214ENST00000558052 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
SLTM-214ENST00000558052 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
SLTM-214ENST00000558052 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
SLTM-214ENST00000558052 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.392e-7■■□□□ 12.5
SLTM-214ENST00000558052 KCNA4P22459 653 aa12.52□□□□□ -0.41
SLTM-214ENST00000558052 BICRAQ9NZM4 1560 aa12.5□□□□□ -0.41
SLTM-214ENST00000558052 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
SLTM-214ENST00000558052 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
SLTM-214ENST00000558052 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
SLTM-214ENST00000558052 U3KPZ7 1027 aaPredicted RBP12.39□□□□□ -0.43
SLTM-214ENST00000558052 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
SLTM-214ENST00000558052 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
SLTM-214ENST00000558052 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
SLTM-214ENST00000558052 CAPN15O75808 1086 aa12.15□□□□□ -0.46
SLTM-214ENST00000558052 DSG3P32926 999 aa12.15□□□□□ -0.46
SLTM-214ENST00000558052 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
SLTM-214ENST00000558052 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
SLTM-214ENST00000558052 EIF4G1Q04637 1599 aaKnown RBP12.1□□□□□ -0.47
SLTM-214ENST00000558052 DNAJC5Q9H3Z4 198 aa12.07□□□□□ -0.48
SLTM-214ENST00000558052 APLP2Q06481 763 aa12.01□□□□□ -0.49
SLTM-214ENST00000558052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
SLTM-214ENST00000558052 HNRNPUL2Q1KMD3 747 aaKnown RBP12□□□□□ -0.49
SLTM-214ENST00000558052 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
SLTM-214ENST00000558052 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
SLTM-214ENST00000558052 SMARCA4P51532 1647 aa11.95□□□□□ -0.5
SLTM-214ENST00000558052 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
SLTM-214ENST00000558052 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
SLTM-214ENST00000558052 ABCB7O75027 752 aa11.86□□□□□ -0.51
SLTM-214ENST00000558052 PEG3Q9GZU2 1588 aa11.86□□□□□ -0.51
SLTM-214ENST00000558052 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
SLTM-214ENST00000558052 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
SLTM-214ENST00000558052 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
SLTM-214ENST00000558052 MROH2BQ7Z745 1585 aa11.79□□□□□ -0.52
SLTM-214ENST00000558052 SLC4A1APQ9BWU0 796 aaKnown RBP11.79□□□□□ -0.52
SLTM-214ENST00000558052 ATAD2BQ9ULI0 1458 aa11.75□□□□□ -0.53
SLTM-214ENST00000558052 WIZO95785 1651 aa11.73□□□□□ -0.53
SLTM-214ENST00000558052 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
SLTM-214ENST00000558052 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
SLTM-214ENST00000558052 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
SLTM-214ENST00000558052 CUX2O14529 1486 aa11.69□□□□□ -0.54
SLTM-214ENST00000558052 POTEHQ6S545 545 aa11.68□□□□□ -0.54
SLTM-214ENST00000558052 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
SLTM-214ENST00000558052 POLA2Q14181 598 aa11.64□□□□□ -0.55
SLTM-214ENST00000558052 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
SLTM-214ENST00000558052 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
SLTM-214ENST00000558052 TOP2AP11388 1531 aaKnown RBP11.59□□□□□ -0.55
SLTM-214ENST00000558052 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
SLTM-214ENST00000558052 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
SLTM-214ENST00000558052 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
SLTM-214ENST00000558052 ZBTB22O15209 634 aa11.53□□□□□ -0.56
SLTM-214ENST00000558052 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
SLTM-214ENST00000558052 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
SLTM-214ENST00000558052 NESP48681 1621 aa11.46□□□□□ -0.58
SLTM-214ENST00000558052 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
SLTM-214ENST00000558052 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
SLTM-214ENST00000558052 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
SLTM-214ENST00000558052 CFTRP13569 1480 aa11.35□□□□□ -0.59
SLTM-214ENST00000558052 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
SLTM-214ENST00000558052 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
SLTM-214ENST00000558052 CADPSQ9ULU8 1353 aa11.32□□□□□ -0.6
SLTM-214ENST00000558052 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
SLTM-214ENST00000558052 WDR62O43379 1518 aa11.3□□□□□ -0.6
SLTM-214ENST00000558052 PDS5BQ9NTI5 1447 aa11.26□□□□□ -0.61
SLTM-214ENST00000558052 CEP164Q9UPV0 1460 aa11.26□□□□□ -0.61
SLTM-214ENST00000558052 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
SLTM-214ENST00000558052 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
SLTM-214ENST00000558052 MRC2Q9UBG0 1479 aa11.25□□□□□ -0.61
SLTM-214ENST00000558052 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
SLTM-214ENST00000558052 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms