RNA–Protein interactions for RNA: ENST00000367549.3

DHX9-201, Transcript of DExH-box helicase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX9, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX9-201ENST00000367549 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
DHX9-201ENST00000367549 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
DHX9-201ENST00000367549 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
DHX9-201ENST00000367549 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
DHX9-201ENST00000367549 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
DHX9-201ENST00000367549 ABCC9O60706 1549 aa14.97□□□□□ -0.01
DHX9-201ENST00000367549 FAM9AQ8IZU1 332 aaPredicted RBP14.93□□□□□ -0.02
DHX9-201ENST00000367549 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
DHX9-201ENST00000367549 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
DHX9-201ENST00000367549 RANGAP1P46060 587 aaPredicted RBP14.67□□□□□ -0.06
DHX9-201ENST00000367549 APLP2Q06481 763 aa14.67□□□□□ -0.06
DHX9-201ENST00000367549 TTBK1Q5TCY1 1321 aaPredicted RBP14.56□□□□□ -0.08
DHX9-201ENST00000367549 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
DHX9-201ENST00000367549 ATP1B4Q9UN42 357 aaPredicted RBP14.46□□□□□ -0.09
DHX9-201ENST00000367549 PCGF6Q9BYE7 350 aa14.26□□□□□ -0.13
DHX9-201ENST00000367549 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
DHX9-201ENST00000367549 CCDC180Q9P1Z9 1646 aa14.2□□□□□ -0.14
DHX9-201ENST00000367549 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
DHX9-201ENST00000367549 PPARGC1BQ86YN6 1023 aaKnown RBP14.16□□□□□ -0.14
DHX9-201ENST00000367549 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
DHX9-201ENST00000367549 LOC105371045A0A1W2PR82 267 aa14.14□□□□□ -0.15
DHX9-201ENST00000367549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
DHX9-201ENST00000367549 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
DHX9-201ENST00000367549 CCER1Q8TC90 406 aaPredicted RBP13.98□□□□□ -0.17
DHX9-201ENST00000367549 FBLN2P98095 1184 aa13.95□□□□□ -0.18
DHX9-201ENST00000367549 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
DHX9-201ENST00000367549 ITGAEP38570 1179 aa13.92□□□□□ -0.18
DHX9-201ENST00000367549 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
DHX9-201ENST00000367549 NACADO15069 1562 aa13.82□□□□□ -0.2
DHX9-201ENST00000367549 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
DHX9-201ENST00000367549 CSRNP3Q8WYN3 585 aa13.72□□□□□ -0.21
DHX9-201ENST00000367549 ZEB1P37275 1124 aaPredicted RBP13.72□□□□□ -0.21
DHX9-201ENST00000367549 P3H3Q8IVL6 736 aa13.7□□□□□ -0.22
DHX9-201ENST00000367549 ARID3CA6NKF2 412 aa13.65□□□□□ -0.22
DHX9-201ENST00000367549 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
DHX9-201ENST00000367549 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
DHX9-201ENST00000367549 DCAF1Q9Y4B6 1507 aa13.57□□□□□ -0.24
DHX9-201ENST00000367549 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
DHX9-201ENST00000367549 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
DHX9-201ENST00000367549 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
DHX9-201ENST00000367549 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
DHX9-201ENST00000367549 CHMP7Q8WUX9 453 aaPredicted RBP13.46□□□□□ -0.26
DHX9-201ENST00000367549 BAZ1AQ9NRL2 1556 aaPredicted RBP13.44□□□□□ -0.26
DHX9-201ENST00000367549 ZNF777Q9ULD5 760 aaPredicted RBP13.41□□□□□ -0.26
DHX9-201ENST00000367549 CDK11AQ9UQ88 783 aaPredicted RBP13.4□□□□□ -0.26
DHX9-201ENST00000367549 CNGB1Q14028 1251 aaPredicted RBP13.38□□□□□ -0.27
DHX9-201ENST00000367549 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
DHX9-201ENST00000367549 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
DHX9-201ENST00000367549 NEUROD1Q13562 356 aa13.34□□□□□ -0.27
DHX9-201ENST00000367549 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
DHX9-201ENST00000367549 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
DHX9-201ENST00000367549 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
DHX9-201ENST00000367549 HRCP23327 699 aa13.32□□□□□ -0.28
DHX9-201ENST00000367549 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
DHX9-201ENST00000367549 MROH2BQ7Z745 1585 aa13.32□□□□□ -0.28
DHX9-201ENST00000367549 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
DHX9-201ENST00000367549 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
DHX9-201ENST00000367549 ZNF326Q5BKZ1 582 aaKnown RBP13.27□□□□□ -0.29
DHX9-201ENST00000367549 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
DHX9-201ENST00000367549 SMARCA2P51531 1590 aa13.18□□□□□ -0.3
DHX9-201ENST00000367549 CCDC88BA6NC98 1476 aa13.18□□□□□ -0.3
DHX9-201ENST00000367549 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
DHX9-201ENST00000367549 CLIP1P30622 1438 aa13.17□□□□□ -0.3
DHX9-201ENST00000367549 CHIC2Q9UKJ5 165 aa13.17□□□□□ -0.3
DHX9-201ENST00000367549 ESF1Q9H501 851 aaKnown RBP13.16□□□□□ -0.3
DHX9-201ENST00000367549 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
DHX9-201ENST00000367549 PLPPR3Q6T4P5 718 aa13.15□□□□□ -0.3
DHX9-201ENST00000367549 EEA1Q15075 1411 aa13.14□□□□□ -0.31
DHX9-201ENST00000367549 BCANQ96GW7 911 aa13.14□□□□□ -0.31
DHX9-201ENST00000367549 PDS5BQ9NTI5 1447 aa13.12□□□□□ -0.31
DHX9-201ENST00000367549 NEFLP07196 543 aa13.12□□□□□ -0.31
DHX9-201ENST00000367549 PLEKHD1A6NEE1 506 aa13.1□□□□□ -0.31
DHX9-201ENST00000367549 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
DHX9-201ENST00000367549 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
DHX9-201ENST00000367549 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
DHX9-201ENST00000367549 CUX2O14529 1486 aa13.09□□□□□ -0.31
DHX9-201ENST00000367549 WIZO95785 1651 aa13.09□□□□□ -0.31
DHX9-201ENST00000367549 GOLGA3Q08378 1498 aa13.08□□□□□ -0.31
DHX9-201ENST00000367549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.329e-7■■■□□ 16.1
DHX9-201ENST00000367549 CADPSQ9ULU8 1353 aa13.08□□□□□ -0.32
DHX9-201ENST00000367549 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
DHX9-201ENST00000367549 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
DHX9-201ENST00000367549 SOGA1O94964 1423 aa13.06□□□□□ -0.32
DHX9-201ENST00000367549 CARMIL1Q5VZK9 1371 aa13.05□□□□□ -0.32
DHX9-201ENST00000367549 CEP162Q5TB80 1403 aa13.04□□□□□ -0.32
DHX9-201ENST00000367549 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
DHX9-201ENST00000367549 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
DHX9-201ENST00000367549 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
DHX9-201ENST00000367549 CEP164Q9UPV0 1460 aa13.02□□□□□ -0.33
DHX9-201ENST00000367549 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
DHX9-201ENST00000367549 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
DHX9-201ENST00000367549 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
DHX9-201ENST00000367549 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
DHX9-201ENST00000367549 CFDP1Q9UEE9 299 aaPredicted RBP12.96□□□□□ -0.33
DHX9-201ENST00000367549 EIF4G1Q04637 1599 aaKnown RBP12.94□□□□□ -0.34
DHX9-201ENST00000367549 TONSLQ96HA7 1378 aa12.92□□□□□ -0.34
DHX9-201ENST00000367549 TRHP20396 242 aaPredicted RBP12.89□□□□□ -0.35
DHX9-201ENST00000367549 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
DHX9-201ENST00000367549 ANP32CO43423 234 aa12.88□□□□□ -0.35
DHX9-201ENST00000367549 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms