Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHB8Q9UN66 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
PCDHB8Q9UN66 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHB8Q9UN66 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.47■■□□□ 1.99
PCDHB8Q9UN66 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHB8Q9UN66 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHB8Q9UN66 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.47■■□□□ 1.99
PCDHB8Q9UN66 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHB8Q9UN66 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHB8Q9UN66 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHB8Q9UN66 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PCDHB8Q9UN66 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHB8Q9UN66 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHB8Q9UN66 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.44■■□□□ 1.98
PCDHB8Q9UN66 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHB8Q9UN66 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHB8Q9UN66 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHB8Q9UN66 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCDHB8Q9UN66 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHB8Q9UN66 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.42■■□□□ 1.98
PCDHB8Q9UN66 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
PCDHB8Q9UN66 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
PCDHB8Q9UN66 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.41■■□□□ 1.98
PCDHB8Q9UN66 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHB8Q9UN66 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHB8Q9UN66 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.4■■□□□ 1.98
PCDHB8Q9UN66 AC110285.7-201ENST00000624417 1536 ntBASIC27.4■■□□□ 1.98
PCDHB8Q9UN66 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.39■■□□□ 1.98
PCDHB8Q9UN66 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
PCDHB8Q9UN66 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PCDHB8Q9UN66 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PCDHB8Q9UN66 HSD17B1P1-201ENST00000590052 955 ntBASIC27.38■■□□□ 1.97
PCDHB8Q9UN66 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
PCDHB8Q9UN66 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDHB8Q9UN66 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHB8Q9UN66 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.37■■□□□ 1.97
PCDHB8Q9UN66 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.37■■□□□ 1.97
PCDHB8Q9UN66 AC008813.1-201ENST00000536597 885 ntBASIC27.37■■□□□ 1.97
PCDHB8Q9UN66 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.37■■□□□ 1.97
PCDHB8Q9UN66 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHB8Q9UN66 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDHB8Q9UN66 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
PCDHB8Q9UN66 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.36■■□□□ 1.97
PCDHB8Q9UN66 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB8Q9UN66 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHB8Q9UN66 AP004833.2-201ENST00000532228 1454 ntBASIC27.35■■□□□ 1.97
PCDHB8Q9UN66 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB8Q9UN66 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB8Q9UN66 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB8Q9UN66 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB8Q9UN66 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.34■■□□□ 1.97
PCDHB8Q9UN66 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PCDHB8Q9UN66 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.33■■□□□ 1.97
PCDHB8Q9UN66 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB8Q9UN66 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHB8Q9UN66 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHB8Q9UN66 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHB8Q9UN66 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB8Q9UN66 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PCDHB8Q9UN66 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB8Q9UN66 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB8Q9UN66 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.3■■□□□ 1.96
PCDHB8Q9UN66 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB8Q9UN66 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.29■■□□□ 1.96
PCDHB8Q9UN66 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB8Q9UN66 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB8Q9UN66 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.28■■□□□ 1.96
PCDHB8Q9UN66 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PCDHB8Q9UN66 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.27■■□□□ 1.96
PCDHB8Q9UN66 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.26■■□□□ 1.95
PCDHB8Q9UN66 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB8Q9UN66 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
PCDHB8Q9UN66 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
PCDHB8Q9UN66 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHB8Q9UN66 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHB8Q9UN66 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB8Q9UN66 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
PCDHB8Q9UN66 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHB8Q9UN66 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB8Q9UN66 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB8Q9UN66 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB8Q9UN66 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms