Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX6-2Q9C056 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NKX6-2Q9C056 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.7■□□□□ 0.9
NKX6-2Q9C056 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX6-2Q9C056 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NKX6-2Q9C056 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX6-2Q9C056 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NKX6-2Q9C056 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NKX6-2Q9C056 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-2Q9C056 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.69■□□□□ 0.9
NKX6-2Q9C056 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-2Q9C056 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-2Q9C056 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX6-2Q9C056 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-2Q9C056 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-2Q9C056 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-2Q9C056 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-2Q9C056 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-2Q9C056 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NKX6-2Q9C056 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.68■□□□□ 0.9
NKX6-2Q9C056 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX6-2Q9C056 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NKX6-2Q9C056 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX6-2Q9C056 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX6-2Q9C056 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX6-2Q9C056 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX6-2Q9C056 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX6-2Q9C056 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.65■□□□□ 0.9
NKX6-2Q9C056 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX6-2Q9C056 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NKX6-2Q9C056 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.64■□□□□ 0.9
NKX6-2Q9C056 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NKX6-2Q9C056 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NKX6-2Q9C056 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKX6-2Q9C056 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKX6-2Q9C056 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKX6-2Q9C056 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NKX6-2Q9C056 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NKX6-2Q9C056 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX6-2Q9C056 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
NKX6-2Q9C056 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NKX6-2Q9C056 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX6-2Q9C056 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NKX6-2Q9C056 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX6-2Q9C056 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-2Q9C056 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.6■□□□□ 0.89
NKX6-2Q9C056 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NKX6-2Q9C056 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-2Q9C056 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NKX6-2Q9C056 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NKX6-2Q9C056 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.6■□□□□ 0.89
NKX6-2Q9C056 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-2Q9C056 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-2Q9C056 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX6-2Q9C056 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NKX6-2Q9C056 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NKX6-2Q9C056 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NKX6-2Q9C056 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NKX6-2Q9C056 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NKX6-2Q9C056 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKX6-2Q9C056 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.58■□□□□ 0.88
NKX6-2Q9C056 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-2Q9C056 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-2Q9C056 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NKX6-2Q9C056 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.57■□□□□ 0.88
NKX6-2Q9C056 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.57■□□□□ 0.88
NKX6-2Q9C056 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX6-2Q9C056 AL139393.2-201ENST00000608721 2025 ntBASIC20.56■□□□□ 0.88
NKX6-2Q9C056 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.56■□□□□ 0.88
NKX6-2Q9C056 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX6-2Q9C056 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.56■□□□□ 0.88
NKX6-2Q9C056 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NKX6-2Q9C056 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NKX6-2Q9C056 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NKX6-2Q9C056 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.54■□□□□ 0.88
NKX6-2Q9C056 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NKX6-2Q9C056 BX255925.1-201ENST00000566954 1854 ntBASIC20.54■□□□□ 0.88
NKX6-2Q9C056 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NKX6-2Q9C056 AC091060.1-201ENST00000623524 1766 ntBASIC20.53■□□□□ 0.88
NKX6-2Q9C056 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-2Q9C056 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-2Q9C056 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NKX6-2Q9C056 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NKX6-2Q9C056 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NKX6-2Q9C056 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX6-2Q9C056 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX6-2Q9C056 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NKX6-2Q9C056 AC133561.1-201ENST00000568600 2415 ntBASIC20.52■□□□□ 0.87
NKX6-2Q9C056 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
NKX6-2Q9C056 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NKX6-2Q9C056 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-2Q9C056 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NKX6-2Q9C056 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms