RNA–Protein interactions for RNA: ENST00000381962.3

SRXN1-201, Transcript of sulfiredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRXN1, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRXN1-201ENST00000381962 NISCHQ9Y2I1 1504 aa50.22■■■■■ 5.63
SRXN1-201ENST00000381962 CCDC180Q9P1Z9 1646 aa43.33■■■■■ 4.53
SRXN1-201ENST00000381962 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
SRXN1-201ENST00000381962 DCAF8L2P0C7V8 631 aa42.03■■■■■ 4.32
SRXN1-201ENST00000381962 SHROOM4Q9ULL8 1493 aa41.86■■■■■ 4.29
SRXN1-201ENST00000381962 ABCC9O60706 1549 aa41.38■■■■■ 4.21
SRXN1-201ENST00000381962 DCAF1Q9Y4B6 1507 aa41.16■■■■■ 4.18
SRXN1-201ENST00000381962 MYO15BQ96JP2 1530 aa40.48■■■■■ 4.07
SRXN1-201ENST00000381962 SCRIBQ14160 1630 aa40.44■■■■■ 4.06
SRXN1-201ENST00000381962 NACADO15069 1562 aa40.36■■■■■ 4.05
SRXN1-201ENST00000381962 SUPT5HO00267 1087 aaKnown RBP40.35■■■■■ 4.05
SRXN1-201ENST00000381962 RB1CC1Q8TDY2 1594 aa40.02■■■■■ 4
SRXN1-201ENST00000381962 UNC13AQ9UPW8 1703 aa39.49■■■■□ 3.91
SRXN1-201ENST00000381962 CECR2Q9BXF3 1484 aa39.32■■■■□ 3.89
SRXN1-201ENST00000381962 PABPN1Q86U42 306 aaKnown RBP eCLIP39.29■■■■□ 3.88
SRXN1-201ENST00000381962 RSF1Q96T23 1441 aaPredicted RBP39.21■■■■□ 3.87
SRXN1-201ENST00000381962 BICRAQ9NZM4 1560 aa39.05■■■■□ 3.84
SRXN1-201ENST00000381962 MROH2BQ7Z745 1585 aa39.02■■■■□ 3.84
SRXN1-201ENST00000381962 WIZO95785 1651 aa38.74■■■■□ 3.79
SRXN1-201ENST00000381962 BAZ1AQ9NRL2 1556 aaPredicted RBP38.65■■■■□ 3.78
SRXN1-201ENST00000381962 CHIC1Q5VXU3 224 aa38.56■■■■□ 3.76
SRXN1-201ENST00000381962 SMARCA4P51532 1647 aa38.55■■■■□ 3.76
SRXN1-201ENST00000381962 TOP2AP11388 1531 aaKnown RBP38.06■■■■□ 3.68
SRXN1-201ENST00000381962 CCDC88BA6NC98 1476 aa37.89■■■■□ 3.66
SRXN1-201ENST00000381962 ATAD2BQ9ULI0 1458 aa37.89■■■■□ 3.66
SRXN1-201ENST00000381962 HRCP23327 699 aa37.88■■■■□ 3.65
SRXN1-201ENST00000381962 PEG3Q9GZU2 1588 aa37.84■■■■□ 3.65
SRXN1-201ENST00000381962 SMARCA2P51531 1590 aa37.84■■■■□ 3.65
SRXN1-201ENST00000381962 EIF4G1Q04637 1599 aaKnown RBP37.81■■■■□ 3.64
SRXN1-201ENST00000381962 BAZ1BQ9UIG0 1483 aaKnown RBP37.69■■■■□ 3.62
SRXN1-201ENST00000381962 TRIM41Q8WV44 630 aa37.64■■■■□ 3.62
SRXN1-201ENST00000381962 PCGF6Q9BYE7 350 aa37.44■■■■□ 3.58
SRXN1-201ENST00000381962 PPARGC1BQ86YN6 1023 aaKnown RBP37.43■■■■□ 3.58
SRXN1-201ENST00000381962 LOC105371045A0A1W2PR82 267 aa37.41■■■■□ 3.58
SRXN1-201ENST00000381962 ABCC8Q09428 1581 aa37.38■■■■□ 3.58
SRXN1-201ENST00000381962 NCAPD3P42695 1498 aa37.37■■■■□ 3.57
SRXN1-201ENST00000381962 FAM9AQ8IZU1 332 aaPredicted RBP37.36■■■■□ 3.57
SRXN1-201ENST00000381962 CC2D2AQ9P2K1 1620 aa37.25■■■■□ 3.55
SRXN1-201ENST00000381962 HMGXB3Q12766 1538 aa37.24■■■■□ 3.55
SRXN1-201ENST00000381962 EHMT2Q96KQ7 1210 aa37.13■■■■□ 3.53
SRXN1-201ENST00000381962 WRNQ14191 1432 aaPredicted RBP eCLIP36.85■■■■□ 3.49
SRXN1-201ENST00000381962 DNAJC5BQ9UF47 199 aa36.83■■■■□ 3.49
SRXN1-201ENST00000381962 SYNJ1O43426 1573 aa36.78■■■■□ 3.48
SRXN1-201ENST00000381962 SOGA1O94964 1423 aa36.74■■■■□ 3.47
SRXN1-201ENST00000381962 CFTRP13569 1480 aa36.69■■■■□ 3.46
SRXN1-201ENST00000381962 RUSC2Q8N2Y8 1516 aa36.67■■■■□ 3.46
SRXN1-201ENST00000381962 CADPSQ9ULU8 1353 aa36.55■■■■□ 3.44
SRXN1-201ENST00000381962 NESP48681 1621 aa36.47■■■■□ 3.43
SRXN1-201ENST00000381962 CUX1P39880 1505 aa36.41■■■■□ 3.42
SRXN1-201ENST00000381962 TOP2BQ02880 1626 aa36.4■■■■□ 3.42
SRXN1-201ENST00000381962 PRDM2Q13029 1718 aa36.33■■■■□ 3.41
SRXN1-201ENST00000381962 CSRNP3Q8WYN3 585 aa36.33■■■■□ 3.41
SRXN1-201ENST00000381962 BIVM-ERCC5R4GMW8 1640 aa36.3■■■■□ 3.4
SRXN1-201ENST00000381962 FANCD2Q9BXW9 1451 aa36.21■■■■□ 3.39
SRXN1-201ENST00000381962 EEA1Q15075 1411 aa36.15■■■■□ 3.38
SRXN1-201ENST00000381962 TRIM26Q12899 539 aaPredicted RBP36.1■■■■□ 3.37
SRXN1-201ENST00000381962 UBTFP17480 764 aaKnown RBP36.07■■■■□ 3.36
SRXN1-201ENST00000381962 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
SRXN1-201ENST00000381962 FGD5Q6ZNL6 1462 aa35.96■■■■□ 3.35
SRXN1-201ENST00000381962 GOLGA3Q08378 1498 aa35.91■■■■□ 3.34
SRXN1-201ENST00000381962 RAPGEF2Q9Y4G8 1499 aa35.89■■■■□ 3.34
SRXN1-201ENST00000381962 CEP164Q9UPV0 1460 aa35.87■■■■□ 3.33
SRXN1-201ENST00000381962 TNIKQ9UKE5 1360 aa35.86■■■■□ 3.33
SRXN1-201ENST00000381962 CEP162Q5TB80 1403 aa35.85■■■■□ 3.33
SRXN1-201ENST00000381962 TOPBP1Q92547 1522 aa35.84■■■■□ 3.33
SRXN1-201ENST00000381962 KIF21AQ7Z4S6 1674 aa35.82■■■■□ 3.33
SRXN1-201ENST00000381962 CUX2O14529 1486 aa35.82■■■■□ 3.32
SRXN1-201ENST00000381962 RANGAP1P46060 587 aaPredicted RBP35.81■■■■□ 3.32
SRXN1-201ENST00000381962 KIF21BO75037 1637 aa35.81■■■■□ 3.32
SRXN1-201ENST00000381962 RAD54L2Q9Y4B4 1467 aa35.81■■■■□ 3.32
SRXN1-201ENST00000381962 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
SRXN1-201ENST00000381962 URB2Q14146 1524 aaKnown RBP35.8■■■■□ 3.32
SRXN1-201ENST00000381962 SCAF1Q9H7N4 1312 aaKnown RBP35.8■■■■□ 3.32
SRXN1-201ENST00000381962 DNMBPQ6XZF7 1577 aa35.79■■■■□ 3.32
SRXN1-201ENST00000381962 PDS5BQ9NTI5 1447 aa35.78■■■■□ 3.32
SRXN1-201ENST00000381962 PELP1Q8IZL8 1130 aaKnown RBP35.75■■■■□ 3.31
SRXN1-201ENST00000381962 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
SRXN1-201ENST00000381962 PRXQ9BXM0 1461 aa35.66■■■■□ 3.3
SRXN1-201ENST00000381962 IGF1RP08069 1367 aa35.61■■■■□ 3.29
SRXN1-201ENST00000381962 TTBK1Q5TCY1 1321 aaPredicted RBP35.53■■■■□ 3.28
SRXN1-201ENST00000381962 ZEB1P37275 1124 aaPredicted RBP35.52■■■■□ 3.28
SRXN1-201ENST00000381962 CLIP1P30622 1438 aa35.47■■■■□ 3.27
SRXN1-201ENST00000381962 ABCA10Q8WWZ4 1543 aa35.47■■■■□ 3.27
SRXN1-201ENST00000381962 ERICH3Q5RHP9 1530 aa35.46■■■■□ 3.27
SRXN1-201ENST00000381962 TDRD9Q8NDG6 1382 aaKnown RBP35.45■■■■□ 3.27
SRXN1-201ENST00000381962 CARMIL1Q5VZK9 1371 aa35.41■■■■□ 3.26
SRXN1-201ENST00000381962 MRC2Q9UBG0 1479 aa35.34■■■■□ 3.25
SRXN1-201ENST00000381962 WDR97A6NE52 1622 aa35.31■■■■□ 3.24
SRXN1-201ENST00000381962 ERCC6Q03468 1493 aa35.28■■■■□ 3.24
SRXN1-201ENST00000381962 TARBP1Q13395 1621 aaKnown RBP35.23■■■■□ 3.23
SRXN1-201ENST00000381962 GAPVD1Q14C86 1478 aa35.19■■■■□ 3.22
SRXN1-201ENST00000381962 ABCA5Q8WWZ7 1642 aa35.17■■■■□ 3.22
SRXN1-201ENST00000381962 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.22
SRXN1-201ENST00000381962 ARAP1Q96P48 1450 aa35.12■■■■□ 3.21
SRXN1-201ENST00000381962 VPS8Q8N3P4 1428 aa35.12■■■■□ 3.21
SRXN1-201ENST00000381962 WDR62O43379 1518 aa35.1■■■■□ 3.21
SRXN1-201ENST00000381962 ZNF608Q9ULD9 1512 aaPredicted RBP35.08■■■■□ 3.21
SRXN1-201ENST00000381962 ARHGAP35Q9NRY4 1499 aa35.05■■■■□ 3.2
SRXN1-201ENST00000381962 THOC2Q8NI27 1593 aaKnown RBP35.02■■■■□ 3.2
SRXN1-201ENST00000381962 P3H3Q8IVL6 736 aa35.01■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms