Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.23■■□□□ 1.47
EXD3Q8N9H8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
EXD3Q8N9H8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
EXD3Q8N9H8 ABCB10P1-201ENST00000614297 2181 ntBASIC24.22■■□□□ 1.47
EXD3Q8N9H8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.21■■□□□ 1.47
EXD3Q8N9H8 AL033527.3-201ENST00000566366 1196 ntBASIC24.21■■□□□ 1.47
EXD3Q8N9H8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
EXD3Q8N9H8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.21■■□□□ 1.47
EXD3Q8N9H8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.47
EXD3Q8N9H8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
EXD3Q8N9H8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
EXD3Q8N9H8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
EXD3Q8N9H8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
EXD3Q8N9H8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
EXD3Q8N9H8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
EXD3Q8N9H8 AC008813.1-201ENST00000536597 885 ntBASIC24.19■■□□□ 1.46
EXD3Q8N9H8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.19■■□□□ 1.46
EXD3Q8N9H8 AC018358.1-201ENST00000631079 1402 ntBASIC24.18■■□□□ 1.46
EXD3Q8N9H8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
EXD3Q8N9H8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
EXD3Q8N9H8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
EXD3Q8N9H8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
EXD3Q8N9H8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
EXD3Q8N9H8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
EXD3Q8N9H8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.16■■□□□ 1.46
EXD3Q8N9H8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.16■■□□□ 1.46
EXD3Q8N9H8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.16■■□□□ 1.46
EXD3Q8N9H8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.15■■□□□ 1.46
EXD3Q8N9H8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
EXD3Q8N9H8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
EXD3Q8N9H8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
EXD3Q8N9H8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.15■■□□□ 1.46
EXD3Q8N9H8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
EXD3Q8N9H8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
EXD3Q8N9H8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
EXD3Q8N9H8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
EXD3Q8N9H8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
EXD3Q8N9H8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
EXD3Q8N9H8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
EXD3Q8N9H8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.13■■□□□ 1.45
EXD3Q8N9H8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.13■■□□□ 1.45
EXD3Q8N9H8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
EXD3Q8N9H8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
EXD3Q8N9H8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
EXD3Q8N9H8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
EXD3Q8N9H8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
EXD3Q8N9H8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
EXD3Q8N9H8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.11■■□□□ 1.45
EXD3Q8N9H8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.11■■□□□ 1.45
EXD3Q8N9H8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
EXD3Q8N9H8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
EXD3Q8N9H8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.09■■□□□ 1.45
EXD3Q8N9H8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
EXD3Q8N9H8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.08■■□□□ 1.45
EXD3Q8N9H8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
EXD3Q8N9H8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
EXD3Q8N9H8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
EXD3Q8N9H8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
EXD3Q8N9H8 U85056.1-201ENST00000616429 682 ntBASIC24.07■■□□□ 1.44
EXD3Q8N9H8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
EXD3Q8N9H8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
EXD3Q8N9H8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.06■■□□□ 1.44
EXD3Q8N9H8 LINC00273-201ENST00000539813 1452 ntBASIC24.06■■□□□ 1.44
EXD3Q8N9H8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
EXD3Q8N9H8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
EXD3Q8N9H8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.05■■□□□ 1.44
EXD3Q8N9H8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
EXD3Q8N9H8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.04■■□□□ 1.44
EXD3Q8N9H8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
EXD3Q8N9H8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
EXD3Q8N9H8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
EXD3Q8N9H8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
EXD3Q8N9H8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
EXD3Q8N9H8 AL161658.1-201ENST00000623641 1967 ntBASIC24.03■■□□□ 1.44
EXD3Q8N9H8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
EXD3Q8N9H8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
EXD3Q8N9H8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.02■■□□□ 1.44
EXD3Q8N9H8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.02■■□□□ 1.44
EXD3Q8N9H8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
EXD3Q8N9H8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
EXD3Q8N9H8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24■■□□□ 1.43
EXD3Q8N9H8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EXD3Q8N9H8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EXD3Q8N9H8 GFER-205ENST00000569451 517 ntTSL 5 BASIC24■■□□□ 1.43
EXD3Q8N9H8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24■■□□□ 1.43
EXD3Q8N9H8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
EXD3Q8N9H8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24■■□□□ 1.43
EXD3Q8N9H8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
EXD3Q8N9H8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
EXD3Q8N9H8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
EXD3Q8N9H8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.99■■□□□ 1.43
EXD3Q8N9H8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.99■■□□□ 1.43
EXD3Q8N9H8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EXD3Q8N9H8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
EXD3Q8N9H8 ABCB10P3-201ENST00000561950 2166 ntBASIC23.98■■□□□ 1.43
EXD3Q8N9H8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
EXD3Q8N9H8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.98■■□□□ 1.43
EXD3Q8N9H8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
EXD3Q8N9H8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
EXD3Q8N9H8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms