Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
CNEP1R1Q8N9A8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
CNEP1R1Q8N9A8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.85■■□□□ 1.25
CNEP1R1Q8N9A8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CNEP1R1Q8N9A8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CNEP1R1Q8N9A8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.83■■□□□ 1.25
CNEP1R1Q8N9A8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CNEP1R1Q8N9A8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CNEP1R1Q8N9A8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CNEP1R1Q8N9A8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CNEP1R1Q8N9A8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.81■■□□□ 1.24
CNEP1R1Q8N9A8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.81■■□□□ 1.24
CNEP1R1Q8N9A8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.8■■□□□ 1.24
CNEP1R1Q8N9A8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CNEP1R1Q8N9A8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CNEP1R1Q8N9A8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CNEP1R1Q8N9A8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CNEP1R1Q8N9A8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CNEP1R1Q8N9A8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.77■■□□□ 1.24
CNEP1R1Q8N9A8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CNEP1R1Q8N9A8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CNEP1R1Q8N9A8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.77■■□□□ 1.23
CNEP1R1Q8N9A8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CNEP1R1Q8N9A8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CNEP1R1Q8N9A8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CNEP1R1Q8N9A8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CNEP1R1Q8N9A8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CNEP1R1Q8N9A8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNEP1R1Q8N9A8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CNEP1R1Q8N9A8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CNEP1R1Q8N9A8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.73■■□□□ 1.23
CNEP1R1Q8N9A8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNEP1R1Q8N9A8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CNEP1R1Q8N9A8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 AC110285.7-201ENST00000624417 1536 ntBASIC22.72■■□□□ 1.23
CNEP1R1Q8N9A8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CNEP1R1Q8N9A8 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.7■■□□□ 1.22
CNEP1R1Q8N9A8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CNEP1R1Q8N9A8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.7■■□□□ 1.22
CNEP1R1Q8N9A8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CNEP1R1Q8N9A8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.7■■□□□ 1.22
CNEP1R1Q8N9A8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.7■■□□□ 1.22
CNEP1R1Q8N9A8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.69■■□□□ 1.22
CNEP1R1Q8N9A8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CNEP1R1Q8N9A8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CNEP1R1Q8N9A8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNEP1R1Q8N9A8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.68■■□□□ 1.22
CNEP1R1Q8N9A8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CNEP1R1Q8N9A8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNEP1R1Q8N9A8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNEP1R1Q8N9A8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNEP1R1Q8N9A8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNEP1R1Q8N9A8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNEP1R1Q8N9A8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CNEP1R1Q8N9A8 HSD17B1P1-201ENST00000590052 955 ntBASIC22.67■■□□□ 1.22
CNEP1R1Q8N9A8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.67■■□□□ 1.22
CNEP1R1Q8N9A8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNEP1R1Q8N9A8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNEP1R1Q8N9A8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNEP1R1Q8N9A8 AC008813.1-201ENST00000536597 885 ntBASIC22.66■■□□□ 1.22
CNEP1R1Q8N9A8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CNEP1R1Q8N9A8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.65■■□□□ 1.22
CNEP1R1Q8N9A8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CNEP1R1Q8N9A8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNEP1R1Q8N9A8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNEP1R1Q8N9A8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.64■■□□□ 1.22
CNEP1R1Q8N9A8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
CNEP1R1Q8N9A8 ABCB10P1-201ENST00000614297 2181 ntBASIC22.64■■□□□ 1.21
CNEP1R1Q8N9A8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNEP1R1Q8N9A8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNEP1R1Q8N9A8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CNEP1R1Q8N9A8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.63■■□□□ 1.21
CNEP1R1Q8N9A8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CNEP1R1Q8N9A8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CNEP1R1Q8N9A8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms