Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 AC135983.2-203ENST00000454486 1613 ntBASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 WHAMMP2-203ENST00000563942 1603 ntBASIC18.56■□□□□ 0.56
IGHV4-28A0A0C4DH34 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGHV4-28A0A0C4DH34 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV4-28A0A0C4DH34 MIR639-201ENST00000384974 98 ntBASIC18.54■□□□□ 0.56
IGHV4-28A0A0C4DH34 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGHV4-28A0A0C4DH34 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGHV4-28A0A0C4DH34 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.53■□□□□ 0.56
IGHV4-28A0A0C4DH34 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.53■□□□□ 0.56
IGHV4-28A0A0C4DH34 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IGHV4-28A0A0C4DH34 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGHV4-28A0A0C4DH34 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGHV4-28A0A0C4DH34 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
IGHV4-28A0A0C4DH34 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.51■□□□□ 0.55
IGHV4-28A0A0C4DH34 ABCB10P1-201ENST00000614297 2181 ntBASIC18.51■□□□□ 0.55
IGHV4-28A0A0C4DH34 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.51■□□□□ 0.55
IGHV4-28A0A0C4DH34 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGHV4-28A0A0C4DH34 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.5■□□□□ 0.55
IGHV4-28A0A0C4DH34 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV4-28A0A0C4DH34 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGHV4-28A0A0C4DH34 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.49■□□□□ 0.55
IGHV4-28A0A0C4DH34 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV4-28A0A0C4DH34 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
IGHV4-28A0A0C4DH34 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
IGHV4-28A0A0C4DH34 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
IGHV4-28A0A0C4DH34 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGHV4-28A0A0C4DH34 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.48■□□□□ 0.55
IGHV4-28A0A0C4DH34 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV4-28A0A0C4DH34 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV4-28A0A0C4DH34 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IGHV4-28A0A0C4DH34 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV4-28A0A0C4DH34 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV4-28A0A0C4DH34 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV4-28A0A0C4DH34 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGHV4-28A0A0C4DH34 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV4-28A0A0C4DH34 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV4-28A0A0C4DH34 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.46■□□□□ 0.55
IGHV4-28A0A0C4DH34 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.46■□□□□ 0.55
IGHV4-28A0A0C4DH34 MIR4449-201ENST00000578365 66 ntBASIC18.46■□□□□ 0.55
IGHV4-28A0A0C4DH34 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGHV4-28A0A0C4DH34 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
IGHV4-28A0A0C4DH34 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV4-28A0A0C4DH34 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
IGHV4-28A0A0C4DH34 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGHV4-28A0A0C4DH34 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV4-28A0A0C4DH34 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.44■□□□□ 0.54
IGHV4-28A0A0C4DH34 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.44■□□□□ 0.54
IGHV4-28A0A0C4DH34 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IGHV4-28A0A0C4DH34 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV4-28A0A0C4DH34 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV4-28A0A0C4DH34 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.43■□□□□ 0.54
IGHV4-28A0A0C4DH34 AP004833.2-201ENST00000532228 1454 ntBASIC18.43■□□□□ 0.54
IGHV4-28A0A0C4DH34 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV4-28A0A0C4DH34 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IGHV4-28A0A0C4DH34 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IGHV4-28A0A0C4DH34 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.42■□□□□ 0.54
IGHV4-28A0A0C4DH34 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
IGHV4-28A0A0C4DH34 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
IGHV4-28A0A0C4DH34 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.42■□□□□ 0.54
IGHV4-28A0A0C4DH34 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
IGHV4-28A0A0C4DH34 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
IGHV4-28A0A0C4DH34 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV4-28A0A0C4DH34 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.41■□□□□ 0.54
IGHV4-28A0A0C4DH34 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV4-28A0A0C4DH34 AC110285.7-201ENST00000624417 1536 ntBASIC18.41■□□□□ 0.54
IGHV4-28A0A0C4DH34 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.41■□□□□ 0.54
IGHV4-28A0A0C4DH34 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV4-28A0A0C4DH34 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
IGHV4-28A0A0C4DH34 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV4-28A0A0C4DH34 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IGHV4-28A0A0C4DH34 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.39■□□□□ 0.54
IGHV4-28A0A0C4DH34 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV4-28A0A0C4DH34 AL139393.2-201ENST00000608721 2025 ntBASIC18.39■□□□□ 0.53
IGHV4-28A0A0C4DH34 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV4-28A0A0C4DH34 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
IGHV4-28A0A0C4DH34 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV4-28A0A0C4DH34 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IGHV4-28A0A0C4DH34 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.39■□□□□ 0.53
IGHV4-28A0A0C4DH34 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV4-28A0A0C4DH34 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV4-28A0A0C4DH34 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV4-28A0A0C4DH34 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IGHV4-28A0A0C4DH34 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IGHV4-28A0A0C4DH34 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms