Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRGV5A0A0B4J1U4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRGV5A0A0B4J1U4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRGV5A0A0B4J1U4 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.16■■□□□ 1.3
TRGV5A0A0B4J1U4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRGV5A0A0B4J1U4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TRGV5A0A0B4J1U4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.15■■□□□ 1.3
TRGV5A0A0B4J1U4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRGV5A0A0B4J1U4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.14■■□□□ 1.3
TRGV5A0A0B4J1U4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.14■■□□□ 1.3
TRGV5A0A0B4J1U4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRGV5A0A0B4J1U4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRGV5A0A0B4J1U4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TRGV5A0A0B4J1U4 HSD17B1P1-201ENST00000590052 955 ntBASIC23.14■■□□□ 1.29
TRGV5A0A0B4J1U4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TRGV5A0A0B4J1U4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TRGV5A0A0B4J1U4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRGV5A0A0B4J1U4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRGV5A0A0B4J1U4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRGV5A0A0B4J1U4 AC008813.1-201ENST00000536597 885 ntBASIC23.13■■□□□ 1.29
TRGV5A0A0B4J1U4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
TRGV5A0A0B4J1U4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRGV5A0A0B4J1U4 AC110285.7-201ENST00000624417 1536 ntBASIC23.13■■□□□ 1.29
TRGV5A0A0B4J1U4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRGV5A0A0B4J1U4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRGV5A0A0B4J1U4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.11■■□□□ 1.29
TRGV5A0A0B4J1U4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
TRGV5A0A0B4J1U4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRGV5A0A0B4J1U4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.11■■□□□ 1.29
TRGV5A0A0B4J1U4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.11■■□□□ 1.29
TRGV5A0A0B4J1U4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRGV5A0A0B4J1U4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRGV5A0A0B4J1U4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRGV5A0A0B4J1U4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRGV5A0A0B4J1U4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
TRGV5A0A0B4J1U4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.09■■□□□ 1.29
TRGV5A0A0B4J1U4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
TRGV5A0A0B4J1U4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.08■■□□□ 1.29
TRGV5A0A0B4J1U4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.08■■□□□ 1.29
TRGV5A0A0B4J1U4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRGV5A0A0B4J1U4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRGV5A0A0B4J1U4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRGV5A0A0B4J1U4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRGV5A0A0B4J1U4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRGV5A0A0B4J1U4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.07■■□□□ 1.28
TRGV5A0A0B4J1U4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.07■■□□□ 1.28
TRGV5A0A0B4J1U4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.07■■□□□ 1.28
TRGV5A0A0B4J1U4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRGV5A0A0B4J1U4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRGV5A0A0B4J1U4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TRGV5A0A0B4J1U4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRGV5A0A0B4J1U4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRGV5A0A0B4J1U4 AP004833.2-201ENST00000532228 1454 ntBASIC23.05■■□□□ 1.28
TRGV5A0A0B4J1U4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
TRGV5A0A0B4J1U4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.04■■□□□ 1.28
TRGV5A0A0B4J1U4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRGV5A0A0B4J1U4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRGV5A0A0B4J1U4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TRGV5A0A0B4J1U4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.03■■□□□ 1.28
TRGV5A0A0B4J1U4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRGV5A0A0B4J1U4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.02■■□□□ 1.28
TRGV5A0A0B4J1U4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRGV5A0A0B4J1U4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.01■■□□□ 1.27
TRGV5A0A0B4J1U4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRGV5A0A0B4J1U4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TRGV5A0A0B4J1U4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TRGV5A0A0B4J1U4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
TRGV5A0A0B4J1U4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23■■□□□ 1.27
TRGV5A0A0B4J1U4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TRGV5A0A0B4J1U4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.99■■□□□ 1.27
TRGV5A0A0B4J1U4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRGV5A0A0B4J1U4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.99■■□□□ 1.27
TRGV5A0A0B4J1U4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.99■■□□□ 1.27
TRGV5A0A0B4J1U4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRGV5A0A0B4J1U4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms