Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 IK-204ENST00000507593 489 ntTSL 310.27□□□□□ -0.773e-6■□□□□ 8.4
PRPF8Q6P2Q9 IK-207ENST00000513256 569 ntTSL 49.79□□□□□ -0.843e-6■□□□□ 8.4
PRPF8Q6P2Q9 IK-203ENST00000503332 540 ntTSL 48.04□□□□□ -1.123e-6■□□□□ 8.4
PRPF8Q6P2Q9 IK-210ENST00000523672 556 ntTSL 45.83□□□□□ -1.483e-6■□□□□ 8.4
PRPF8Q6P2Q9 TMEM94-210ENST00000579241 986 ntTSL 211.4□□□□□ -0.582e-10■□□□□ 8.3
PRPF8Q6P2Q9 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.49■■□□□ 1.513e-7■□□□□ 8.3
PRPF8Q6P2Q9 MPP5-203ENST00000554911 363 ntTSL 323.42■■□□□ 1.343e-7■□□□□ 8.3
PRPF8Q6P2Q9 EIF2AK2-202ENST00000390013 564 ntTSL 422.37■■□□□ 1.173e-7■□□□□ 8.3
PRPF8Q6P2Q9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.863e-7■□□□□ 8.3
PRPF8Q6P2Q9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.31■□□□□ 0.683e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-218ENST00000512855 654 ntTSL 519.28■□□□□ 0.683e-7■□□□□ 8.3
PRPF8Q6P2Q9 CYHR1-207ENST00000528558 907 ntTSL 219.26■□□□□ 0.673e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-205ENST00000503617 1027 ntTSL 219.17■□□□□ 0.663e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-215ENST00000510032 639 ntTSL 218.84■□□□□ 0.613e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-219ENST00000513053 748 ntTSL 318.55■□□□□ 0.563e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-202ENST00000502502 588 ntTSL 418.1■□□□□ 0.493e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-220ENST00000514803 524 ntTSL 218.08■□□□□ 0.483e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-222ENST00000515697 607 ntTSL 317.52■□□□□ 0.43e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-214ENST00000509022 521 ntTSL 1 (best)17.31■□□□□ 0.363e-7■□□□□ 8.3
PRPF8Q6P2Q9 MPP5-207ENST00000557783 567 ntTSL 417.18■□□□□ 0.343e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-212ENST00000507992 444 ntTSL 317.09■□□□□ 0.333e-7■□□□□ 8.3
PRPF8Q6P2Q9 NDUFA11-203ENST00000591160 604 ntTSL 316.71■□□□□ 0.273e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-204ENST00000503600 578 ntTSL 416.58■□□□□ 0.243e-7■□□□□ 8.3
PRPF8Q6P2Q9 CYTH2-206ENST00000462117 540 ntTSL 416.48■□□□□ 0.233e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-213ENST00000508567 559 ntTSL 316.39■□□□□ 0.213e-7■□□□□ 8.3
PRPF8Q6P2Q9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.09■□□□□ 0.173e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-209ENST00000505260 1136 ntTSL 515.46■□□□□ 0.073e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-211ENST00000507305 800 ntTSL 215.46■□□□□ 0.073e-7■□□□□ 8.3
PRPF8Q6P2Q9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -03e-7■□□□□ 8.3
PRPF8Q6P2Q9 EIF2AK2-205ENST00000411537 623 ntTSL 513.98□□□□□ -0.173e-7■□□□□ 8.3
PRPF8Q6P2Q9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.213e-7■□□□□ 8.3
PRPF8Q6P2Q9 ICAM1-204ENST00000588645 581 ntTSL 213.04□□□□□ -0.323e-7■□□□□ 8.3
PRPF8Q6P2Q9 MPP5-202ENST00000554208 2458 ntTSL 213.01□□□□□ -0.333e-7■□□□□ 8.3
PRPF8Q6P2Q9 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.363e-7■□□□□ 8.3
PRPF8Q6P2Q9 SLC6A8-209ENST00000476466 470 ntTSL 312.1□□□□□ -0.473e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-207ENST00000504598 572 ntTSL 411.89□□□□□ -0.513e-7■□□□□ 8.3
PRPF8Q6P2Q9 CYTH2-208ENST00000474049 576 ntTSL 211.72□□□□□ -0.533e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-203ENST00000502856 958 ntTSL 510.99□□□□□ -0.653e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.693e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-217ENST00000510920 662 ntTSL 310.34□□□□□ -0.753e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.773e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-216ENST00000510186 431 ntTSL 39.98□□□□□ -0.813e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-208ENST00000504823 635 ntTSL 38.62□□□□□ -1.033e-7■□□□□ 8.3
PRPF8Q6P2Q9 HCG18-247ENST00000602698 573 ntTSL 3 BASIC8.37□□□□□ -1.073e-7■□□□□ 8.3
PRPF8Q6P2Q9 ICAM1-201ENST00000264832 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.13e-7■□□□□ 8.3
PRPF8Q6P2Q9 HCG18-248ENST00000602861 372 ntTSL 36.15□□□□□ -1.433e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-206ENST00000504137 2877 ntTSL 1 (best)4.45□□□□□ -1.73e-7■□□□□ 8.3
PRPF8Q6P2Q9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.75□□□□□ -1.813e-7■□□□□ 8.3
PRPF8Q6P2Q9 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.46□□□□□ -2.023e-7■□□□□ 8.3
PRPF8Q6P2Q9 FAM200B-221ENST00000515430 785 ntTSL 2-0.65□□□□□ -2.513e-7■□□□□ 8.3
PRPF8Q6P2Q9 FUBP3-203ENST00000467100 2228 ntTSL 219.24■□□□□ 0.674e-7■□□□□ 8.3
PRPF8Q6P2Q9 PIGS-204ENST00000465444 578 ntTSL 59.82□□□□□ -0.844e-7■□□□□ 8.3
PRPF8Q6P2Q9 PIGS-211ENST00000582615 699 ntTSL 29.68□□□□□ -0.864e-7■□□□□ 8.3
PRPF8Q6P2Q9 MRE11-208ENST00000538923 558 ntTSL 57.55□□□□□ -1.24e-7■□□□□ 8.3
PRPF8Q6P2Q9 MRE11-206ENST00000536144 619 ntTSL 37.45□□□□□ -1.224e-7■□□□□ 8.3
PRPF8Q6P2Q9 PIGS-210ENST00000580968 372 ntTSL 37.39□□□□□ -1.234e-7■□□□□ 8.3
PRPF8Q6P2Q9 MRE11-207ENST00000536754 572 ntTSL 43.96□□□□□ -1.774e-7■□□□□ 8.3
PRPF8Q6P2Q9 ABCC10-202ENST00000372512 405 ntTSL 39.62□□□□□ -0.871e-9■□□□□ 8.3
PRPF8Q6P2Q9 SH3BP2-214ENST00000509677 1087 ntTSL 315.24■□□□□ 0.033e-7■□□□□ 8.3
PRPF8Q6P2Q9 SH3BP2-223ENST00000512131 615 ntTSL 214.71□□□□□ -0.053e-7■□□□□ 8.3
PRPF8Q6P2Q9 SH3BP2-215ENST00000510074 649 ntTSL 514.11□□□□□ -0.153e-7■□□□□ 8.3
PRPF8Q6P2Q9 SH3BP2-219ENST00000511237 517 ntTSL 514.11□□□□□ -0.153e-7■□□□□ 8.3
PRPF8Q6P2Q9 SH3BP2-211ENST00000506932 537 ntTSL 413.42□□□□□ -0.263e-7■□□□□ 8.3
PRPF8Q6P2Q9 SH3BP2-226ENST00000513095 609 ntTSL 411.98□□□□□ -0.493e-7■□□□□ 8.3
PRPF8Q6P2Q9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.121e-7■□□□□ 8.3
PRPF8Q6P2Q9 UGDH-208ENST00000510490 534 ntTSL 416.25■□□□□ 0.199e-21■□□□□ 8.3
PRPF8Q6P2Q9 ELP5-208ENST00000572104 416 ntTSL 38.72□□□□□ -1.014e-12■□□□□ 8.3
PRPF8Q6P2Q9 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC8.98□□□□□ -0.971e-7■□□□□ 8.3
PRPF8Q6P2Q9 DIS3L2-207ENST00000418143 843 ntTSL 312.23□□□□□ -0.451e-6■□□□□ 8.3
PRPF8Q6P2Q9 DIS3L2-211ENST00000434477 659 ntTSL 38.65□□□□□ -1.031e-6■□□□□ 8.3
PRPF8Q6P2Q9 MCRIP2-204ENST00000575894 1728 nt14.62□□□□□ -0.071e-14■□□□□ 8.3
PRPF8Q6P2Q9 HBA1-204ENST00000487791 410 ntTSL 1 (best)19.01■□□□□ 0.633e-7■□□□□ 8.3
PRPF8Q6P2Q9 PEAK1-209ENST00000567808 520 ntTSL 318.19■□□□□ 0.53e-7■□□□□ 8.3
PRPF8Q6P2Q9 PDE4A-205ENST00000586275 695 ntTSL 317.99■□□□□ 0.473e-7■□□□□ 8.3
PRPF8Q6P2Q9 PEAK1-210ENST00000569159 531 ntTSL 416.98■□□□□ 0.313e-7■□□□□ 8.3
PRPF8Q6P2Q9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.213e-7■□□□□ 8.3
PRPF8Q6P2Q9 HBA1-203ENST00000472694 674 ntTSL 1 (best)15.02■□□□□ -03e-7■□□□□ 8.3
PRPF8Q6P2Q9 PEAK1-206ENST00000564328 2323 ntTSL 514.94□□□□□ -0.023e-7■□□□□ 8.3
PRPF8Q6P2Q9 PEAK1-208ENST00000567337 555 ntTSL 414.71□□□□□ -0.053e-7■□□□□ 8.3
PRPF8Q6P2Q9 ABHD11-212ENST00000480445 746 ntTSL 1 (best)14.25□□□□□ -0.133e-7■□□□□ 8.3
PRPF8Q6P2Q9 ABHD11-211ENST00000474130 623 ntTSL 312.8□□□□□ -0.363e-7■□□□□ 8.3
PRPF8Q6P2Q9 DGUOK-204ENST00000462551 573 ntTSL 29.48□□□□□ -0.893e-7■□□□□ 8.3
PRPF8Q6P2Q9 HBA1-202ENST00000397797 504 ntTSL 2 BASIC9.35□□□□□ -0.913e-7■□□□□ 8.3
PRPF8Q6P2Q9 ABHD11-209ENST00000468331 413 ntTSL 38.38□□□□□ -1.073e-7■□□□□ 8.3
PRPF8Q6P2Q9 ABHD11-210ENST00000468998 751 ntTSL 25.92□□□□□ -1.463e-7■□□□□ 8.3
PRPF8Q6P2Q9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.63e-7■□□□□ 8.3
PRPF8Q6P2Q9 DGUOK-207ENST00000493055 593 ntTSL 24.65□□□□□ -1.663e-7■□□□□ 8.3
PRPF8Q6P2Q9 PEAK1-212ENST00000569819 466 ntTSL 34.4□□□□□ -1.713e-7■□□□□ 8.3
PRPF8Q6P2Q9 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.36□□□□□ -1.713e-7■□□□□ 8.3
PRPF8Q6P2Q9 RACGAP1-217ENST00000549342 841 ntTSL 54.35□□□□□ -1.713e-7■□□□□ 8.3
PRPF8Q6P2Q9 HERC1-213ENST00000561359 551 ntTSL 35.07□□□□□ -1.63e-14■□□□□ 8.3
PRPF8Q6P2Q9 HERC1-215ENST00000561436 551 ntTSL 42.36□□□□□ -2.033e-14■□□□□ 8.3
PRPF8Q6P2Q9 CAPN1-222ENST00000532285 568 ntTSL 419.57■□□□□ 0.724e-7■□□□□ 8.2
PRPF8Q6P2Q9 RBSN-209ENST00000507357 582 ntTSL 416■□□□□ 0.154e-7■□□□□ 8.2
PRPF8Q6P2Q9 ATXN2L-222ENST00000567024 525 ntTSL 314.8□□□□□ -0.042e-37■□□□□ 8.2
PRPF8Q6P2Q9 LLGL2-212ENST00000578719 680 ntTSL 313.36□□□□□ -0.274e-7■□□□□ 8.2
PRPF8Q6P2Q9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.86□□□□□ -0.353e-19■□□□□ 8.2
PRPF8Q6P2Q9 PLEKHH3-206ENST00000591476 659 ntTSL 212.86□□□□□ -0.354e-7■□□□□ 8.2
PRPF8Q6P2Q9 NCKAP5L-202ENST00000433948 4235 ntTSL 1 (best)10.59□□□□□ -0.714e-7■□□□□ 8.2
PRPF8Q6P2Q9 RASSF4-212ENST00000493490 479 ntTSL 29.89□□□□□ -0.834e-7■□□□□ 8.2
Retrieved 100 of 73,762 protein–RNA pairs in 3792.6 ms