RNA–Protein interactions for RNA: ENST00000513053.5

FAM200B-219, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 3

Gene FAM200B, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-219ENST00000513053 NISCHQ9Y2I1 1504 aa53.24■■■■■ 6.11
FAM200B-219ENST00000513053 CCDC180Q9P1Z9 1646 aa47.42■■■■■ 5.18
FAM200B-219ENST00000513053 ABCC9O60706 1549 aa46.64■■■■■ 5.06
FAM200B-219ENST00000513053 RB1CC1Q8TDY2 1594 aa44.76■■■■■ 4.76
FAM200B-219ENST00000513053 NACADO15069 1562 aa44.66■■■■■ 4.74
FAM200B-219ENST00000513053 DCAF8L2P0C7V8 631 aa44.58■■■■■ 4.73
FAM200B-219ENST00000513053 MYO15BQ96JP2 1530 aa44.33■■■■■ 4.69
FAM200B-219ENST00000513053 ZCCHC6Q5VYS8 1495 aaKnown RBP44.28■■■■■ 4.68
FAM200B-219ENST00000513053 DCAF1Q9Y4B6 1507 aa44.04■■■■■ 4.64
FAM200B-219ENST00000513053 UNC13AQ9UPW8 1703 aa43.77■■■■■ 4.6
FAM200B-219ENST00000513053 PABPN1Q86U42 306 aaKnown RBP eCLIP43.57■■■■■ 4.57
FAM200B-219ENST00000513053 BICRAQ9NZM4 1560 aa43.43■■■■■ 4.54
FAM200B-219ENST00000513053 SCRIBQ14160 1630 aa43.22■■■■■ 4.51
FAM200B-219ENST00000513053 DNAJC5BQ9UF47 199 aa43.1■■■■■ 4.49
FAM200B-219ENST00000513053 SHROOM4Q9ULL8 1493 aa42.94■■■■■ 4.46
FAM200B-219ENST00000513053 EIF4G1Q04637 1599 aaKnown RBP42.3■■■■■ 4.36
FAM200B-219ENST00000513053 CC2D2AQ9P2K1 1620 aa42.19■■■■■ 4.34
FAM200B-219ENST00000513053 CECR2Q9BXF3 1484 aa41.94■■■■■ 4.3
FAM200B-219ENST00000513053 SMARCA4P51532 1647 aa41.35■■■■■ 4.21
FAM200B-219ENST00000513053 BAZ1AQ9NRL2 1556 aaPredicted RBP41.26■■■■■ 4.2
FAM200B-219ENST00000513053 NCAPD3P42695 1498 aa41.23■■■■■ 4.19
FAM200B-219ENST00000513053 ATAD2BQ9ULI0 1458 aa41.21■■■■■ 4.19
FAM200B-219ENST00000513053 SMARCA2P51531 1590 aa41.12■■■■■ 4.17
FAM200B-219ENST00000513053 MROH2BQ7Z745 1585 aa41.02■■■■■ 4.16
FAM200B-219ENST00000513053 HMGXB3Q12766 1538 aa40.98■■■■■ 4.15
FAM200B-219ENST00000513053 PEG3Q9GZU2 1588 aa40.97■■■■■ 4.15
FAM200B-219ENST00000513053 BAZ1BQ9UIG0 1483 aaKnown RBP40.83■■■■■ 4.13
FAM200B-219ENST00000513053 WIZO95785 1651 aa40.56■■■■■ 4.08
FAM200B-219ENST00000513053 RSF1Q96T23 1441 aaPredicted RBP40.47■■■■■ 4.07
FAM200B-219ENST00000513053 NESP48681 1621 aa40.3■■■■■ 4.04
FAM200B-219ENST00000513053 ERCC6Q03468 1493 aa40.2■■■■■ 4.03
FAM200B-219ENST00000513053 LAMC3Q9Y6N6 1575 aa40.16■■■■■ 4.02
FAM200B-219ENST00000513053 TOP2AP11388 1531 aaKnown RBP40.11■■■■■ 4.01
FAM200B-219ENST00000513053 CADPSQ9ULU8 1353 aa40.01■■■■■ 4
FAM200B-219ENST00000513053 PDS5BQ9NTI5 1447 aa39.91■■■■□ 3.98
FAM200B-219ENST00000513053 CUX2O14529 1486 aa39.89■■■■□ 3.98
FAM200B-219ENST00000513053 KIF21AQ7Z4S6 1674 aa39.8■■■■□ 3.96
FAM200B-219ENST00000513053 THOC2Q8NI27 1593 aaKnown RBP39.73■■■■□ 3.95
FAM200B-219ENST00000513053 CFTRP13569 1480 aa39.72■■■■□ 3.95
FAM200B-219ENST00000513053 CCDC88BA6NC98 1476 aa39.67■■■■□ 3.94
FAM200B-219ENST00000513053 FANCD2Q9BXW9 1451 aa39.53■■■■□ 3.92
FAM200B-219ENST00000513053 MRC2Q9UBG0 1479 aa39.49■■■■□ 3.91
FAM200B-219ENST00000513053 CEP164Q9UPV0 1460 aa39.49■■■■□ 3.91
FAM200B-219ENST00000513053 PRDM2Q13029 1718 aa39.39■■■■□ 3.9
FAM200B-219ENST00000513053 WDR62O43379 1518 aa39.38■■■■□ 3.89
FAM200B-219ENST00000513053 SUPT5HO00267 1087 aaKnown RBP39.25■■■■□ 3.87
FAM200B-219ENST00000513053 URB2Q14146 1524 aaKnown RBP39.16■■■■□ 3.86
FAM200B-219ENST00000513053 DNAJC5Q9H3Z4 198 aa39.01■■■■□ 3.84
FAM200B-219ENST00000513053 TOPBP1Q92547 1522 aa38.88■■■■□ 3.81
FAM200B-219ENST00000513053 ABCC8Q09428 1581 aa38.87■■■■□ 3.81
FAM200B-219ENST00000513053 DNMBPQ6XZF7 1577 aa38.8■■■■□ 3.8
FAM200B-219ENST00000513053 IFT140Q96RY7 1462 aa38.69■■■■□ 3.78
FAM200B-219ENST00000513053 ZNF608Q9ULD9 1512 aaPredicted RBP38.54■■■■□ 3.76
FAM200B-219ENST00000513053 POLA1P09884 1462 aaPredicted RBP38.53■■■■□ 3.76
FAM200B-219ENST00000513053 CUX1P39880 1505 aa38.49■■■■□ 3.75
FAM200B-219ENST00000513053 TARBP1Q13395 1621 aaKnown RBP38.48■■■■□ 3.75
FAM200B-219ENST00000513053 FGD5Q6ZNL6 1462 aa38.39■■■■□ 3.74
FAM200B-219ENST00000513053 SOGA1O94964 1423 aa38.38■■■■□ 3.74
FAM200B-219ENST00000513053 RAD54L2Q9Y4B4 1467 aa38.37■■■■□ 3.73
FAM200B-219ENST00000513053 EIF4G3O43432 1585 aaKnown RBP38.36■■■■□ 3.73
FAM200B-219ENST00000513053 AQRO60306 1485 aaKnown RBP eCLIP38.3■■■■□ 3.72
FAM200B-219ENST00000513053 OSCARQ8IYS5 282 aa38.23■■■■□ 3.71
FAM200B-219ENST00000513053 TDRD9Q8NDG6 1382 aaKnown RBP38.19■■■■□ 3.7
FAM200B-219ENST00000513053 WRNQ14191 1432 aaPredicted RBP eCLIP38.15■■■■□ 3.7
FAM200B-219ENST00000513053 WDR97A6NE52 1622 aa38.15■■■■□ 3.7
FAM200B-219ENST00000513053 TOP2BQ02880 1626 aa38.09■■■■□ 3.69
FAM200B-219ENST00000513053 BIVM-ERCC5R4GMW8 1640 aa38.09■■■■□ 3.69
FAM200B-219ENST00000513053 SYNJ1O43426 1573 aa38.06■■■■□ 3.68
FAM200B-219ENST00000513053 ABCA10Q8WWZ4 1543 aa38.02■■■■□ 3.68
FAM200B-219ENST00000513053 GRIN2BQ13224 1484 aa37.95■■■■□ 3.67
FAM200B-219ENST00000513053 CHD1O14646 1710 aa37.93■■■■□ 3.66
FAM200B-219ENST00000513053 GAPVD1Q14C86 1478 aa37.92■■■■□ 3.66
FAM200B-219ENST00000513053 SNAPC4Q5SXM2 1469 aa37.92■■■■□ 3.66
FAM200B-219ENST00000513053 ABCA5Q8WWZ7 1642 aa37.88■■■■□ 3.65
FAM200B-219ENST00000513053 FBLN2P98095 1184 aa37.88■■■■□ 3.65
FAM200B-219ENST00000513053 MAGI1Q96QZ7 1491 aaPredicted RBP37.87■■■■□ 3.65
FAM200B-219ENST00000513053 PBRM1Q86U86 1689 aa37.85■■■■□ 3.65
FAM200B-219ENST00000513053 CHMP7Q8WUX9 453 aaPredicted RBP37.76■■■■□ 3.64
FAM200B-219ENST00000513053 SYNJ2O15056 1496 aa37.73■■■■□ 3.63
FAM200B-219ENST00000513053 RIMBP3CA6NJZ7 1639 aa37.61■■■■□ 3.61
FAM200B-219ENST00000513053 RIMBP3BA6NNM3 1639 aa37.61■■■■□ 3.61
FAM200B-219ENST00000513053 RIMBP3Q9UFD9 1639 aa37.61■■■■□ 3.61
FAM200B-219ENST00000513053 ARHGEF11O15085 1522 aa37.57■■■■□ 3.61
FAM200B-219ENST00000513053 TRIM41Q8WV44 630 aa37.57■■■■□ 3.6
FAM200B-219ENST00000513053 ERICH3Q5RHP9 1530 aa37.56■■■■□ 3.6
FAM200B-219ENST00000513053 CLASP1Q7Z460 1538 aa37.52■■■■□ 3.6
FAM200B-219ENST00000513053 ADAMTS12P58397 1594 aa37.52■■■■□ 3.6
FAM200B-219ENST00000513053 FHAD1B1AJZ9 1412 aa37.48■■■■□ 3.59
FAM200B-219ENST00000513053 GRIN2AQ12879 1464 aa37.45■■■■□ 3.59
FAM200B-219ENST00000513053 KIF27Q86VH2 1401 aa37.37■■■■□ 3.57
FAM200B-219ENST00000513053 NUP160Q12769 1436 aa37.32■■■■□ 3.56
FAM200B-219ENST00000513053 IGF1RP08069 1367 aa37.29■■■■□ 3.56
FAM200B-219ENST00000513053 CEP170Q5SW79 1584 aa37.28■■■■□ 3.56
FAM200B-219ENST00000513053 CYB5RLQ6IPT4 315 aa37.27■■■■□ 3.56
FAM200B-219ENST00000513053 ARAP1Q96P48 1450 aa37.26■■■■□ 3.55
FAM200B-219ENST00000513053 CUL7Q14999 1698 aa37.15■■■■□ 3.54
FAM200B-219ENST00000513053 SHROOM2Q13796 1616 aa37.06■■■■□ 3.52
FAM200B-219ENST00000513053 CARMIL1Q5VZK9 1371 aa37.04■■■■□ 3.52
FAM200B-219ENST00000513053 ERCC6L2Q5T890 1561 aa36.99■■■■□ 3.51
FAM200B-219ENST00000513053 RUSC2Q8N2Y8 1516 aa36.98■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms