RNA–Protein interactions for RNA: ENST00000397797.1

HBA1-202, Transcript of hemoglobin subunit alpha 1, humanhuman

TSL 2 BASIC

Gene HBA1, Length 504 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1-202ENST00000397797 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
HBA1-202ENST00000397797 ABCC9O60706 1549 aa24.31■■□□□ 1.48
HBA1-202ENST00000397797 CCDC180Q9P1Z9 1646 aa23.7■■□□□ 1.38
HBA1-202ENST00000397797 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
HBA1-202ENST00000397797 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
HBA1-202ENST00000397797 NACADO15069 1562 aa22.55■■□□□ 1.2
HBA1-202ENST00000397797 PABPN1Q86U42 306 aaKnown RBP eCLIP22.54■■□□□ 1.2
HBA1-202ENST00000397797 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
HBA1-202ENST00000397797 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
HBA1-202ENST00000397797 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
HBA1-202ENST00000397797 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
HBA1-202ENST00000397797 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
HBA1-202ENST00000397797 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
HBA1-202ENST00000397797 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
HBA1-202ENST00000397797 SHROOM4Q9ULL8 1493 aa21.87■■□□□ 1.09
HBA1-202ENST00000397797 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
HBA1-202ENST00000397797 DCAF1Q9Y4B6 1507 aa21.54■■□□□ 1.04
HBA1-202ENST00000397797 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
HBA1-202ENST00000397797 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
HBA1-202ENST00000397797 CUX2O14529 1486 aa21.24■□□□□ 0.99
HBA1-202ENST00000397797 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
HBA1-202ENST00000397797 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
HBA1-202ENST00000397797 NESP48681 1621 aa20.74■□□□□ 0.91
HBA1-202ENST00000397797 ATAD2BQ9ULI0 1458 aa20.69■□□□□ 0.9
HBA1-202ENST00000397797 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
HBA1-202ENST00000397797 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
HBA1-202ENST00000397797 HMGXB3Q12766 1538 aa20.62■□□□□ 0.89
HBA1-202ENST00000397797 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
HBA1-202ENST00000397797 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
HBA1-202ENST00000397797 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
HBA1-202ENST00000397797 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
HBA1-202ENST00000397797 BAZ1BQ9UIG0 1483 aaKnown RBP20.4■□□□□ 0.86
HBA1-202ENST00000397797 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
HBA1-202ENST00000397797 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
HBA1-202ENST00000397797 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
HBA1-202ENST00000397797 WDR62O43379 1518 aa20.23■□□□□ 0.83
HBA1-202ENST00000397797 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
HBA1-202ENST00000397797 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
HBA1-202ENST00000397797 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
HBA1-202ENST00000397797 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
HBA1-202ENST00000397797 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
HBA1-202ENST00000397797 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
HBA1-202ENST00000397797 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
HBA1-202ENST00000397797 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
HBA1-202ENST00000397797 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
HBA1-202ENST00000397797 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
HBA1-202ENST00000397797 URB2Q14146 1524 aaKnown RBP19.84■□□□□ 0.77
HBA1-202ENST00000397797 WIZO95785 1651 aa19.83■□□□□ 0.76
HBA1-202ENST00000397797 CFTRP13569 1480 aa19.82■□□□□ 0.76
HBA1-202ENST00000397797 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
HBA1-202ENST00000397797 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
HBA1-202ENST00000397797 ARAP1Q96P48 1450 aa19.63■□□□□ 0.73
HBA1-202ENST00000397797 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
HBA1-202ENST00000397797 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
HBA1-202ENST00000397797 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
HBA1-202ENST00000397797 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
HBA1-202ENST00000397797 CHD1O14646 1710 aa19.52■□□□□ 0.72
HBA1-202ENST00000397797 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
HBA1-202ENST00000397797 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
HBA1-202ENST00000397797 TOPBP1Q92547 1522 aa19.49■□□□□ 0.71
HBA1-202ENST00000397797 RSF1Q96T23 1441 aaPredicted RBP19.49■□□□□ 0.71
HBA1-202ENST00000397797 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.7
HBA1-202ENST00000397797 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
HBA1-202ENST00000397797 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
HBA1-202ENST00000397797 DNMBPQ6XZF7 1577 aa19.35■□□□□ 0.69
HBA1-202ENST00000397797 CLASP1Q7Z460 1538 aa19.31■□□□□ 0.68
HBA1-202ENST00000397797 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
HBA1-202ENST00000397797 FBLN2P98095 1184 aa19.31■□□□□ 0.68
HBA1-202ENST00000397797 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
HBA1-202ENST00000397797 RAD54L2Q9Y4B4 1467 aa19.2■□□□□ 0.66
HBA1-202ENST00000397797 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
HBA1-202ENST00000397797 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
HBA1-202ENST00000397797 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
HBA1-202ENST00000397797 SOGA1O94964 1423 aa19.12■□□□□ 0.65
HBA1-202ENST00000397797 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
HBA1-202ENST00000397797 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
HBA1-202ENST00000397797 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
HBA1-202ENST00000397797 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
HBA1-202ENST00000397797 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
HBA1-202ENST00000397797 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
HBA1-202ENST00000397797 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
HBA1-202ENST00000397797 ERCC6L2Q5T890 1561 aa18.98■□□□□ 0.63
HBA1-202ENST00000397797 CUX1P39880 1505 aa18.94■□□□□ 0.62
HBA1-202ENST00000397797 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
HBA1-202ENST00000397797 KIF13AQ9H1H9 1805 aa18.92■□□□□ 0.62
HBA1-202ENST00000397797 ILDR1Q86SU0 546 aaPredicted RBP18.86■□□□□ 0.61
HBA1-202ENST00000397797 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
HBA1-202ENST00000397797 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.61
HBA1-202ENST00000397797 NUP160Q12769 1436 aa18.81■□□□□ 0.6
HBA1-202ENST00000397797 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
HBA1-202ENST00000397797 KDM4FA0A1W2PPD8 638 aa18.8■□□□□ 0.6
HBA1-202ENST00000397797 SHROOM2Q13796 1616 aa18.8■□□□□ 0.6
HBA1-202ENST00000397797 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
HBA1-202ENST00000397797 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
HBA1-202ENST00000397797 ABCC10Q5T3U5 1492 aa18.71■□□□□ 0.59
HBA1-202ENST00000397797 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
HBA1-202ENST00000397797 DIP2BQ9P265 1576 aa18.64■□□□□ 0.58
HBA1-202ENST00000397797 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
HBA1-202ENST00000397797 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
HBA1-202ENST00000397797 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms