RNA–Protein interactions for RNA: ENST00000515697.5

FAM200B-222, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 3

Gene FAM200B, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-222ENST00000515697 NISCHQ9Y2I1 1504 aa50.31■■■■■ 5.64
FAM200B-222ENST00000515697 CCDC180Q9P1Z9 1646 aa44.99■■■■■ 4.79
FAM200B-222ENST00000515697 ABCC9O60706 1549 aa44.44■■■■■ 4.7
FAM200B-222ENST00000515697 RB1CC1Q8TDY2 1594 aa42.54■■■■■ 4.4
FAM200B-222ENST00000515697 NACADO15069 1562 aa42.39■■■■■ 4.38
FAM200B-222ENST00000515697 DCAF8L2P0C7V8 631 aa42.03■■■■■ 4.32
FAM200B-222ENST00000515697 MYO15BQ96JP2 1530 aa42.02■■■■■ 4.32
FAM200B-222ENST00000515697 ZCCHC6Q5VYS8 1495 aaKnown RBP41.81■■■■■ 4.28
FAM200B-222ENST00000515697 UNC13AQ9UPW8 1703 aa41.68■■■■■ 4.26
FAM200B-222ENST00000515697 DCAF1Q9Y4B6 1507 aa41.64■■■■■ 4.26
FAM200B-222ENST00000515697 PABPN1Q86U42 306 aaKnown RBP eCLIP41.4■■■■■ 4.22
FAM200B-222ENST00000515697 BICRAQ9NZM4 1560 aa41.37■■■■■ 4.21
FAM200B-222ENST00000515697 DNAJC5BQ9UF47 199 aa41.34■■■■■ 4.21
FAM200B-222ENST00000515697 SCRIBQ14160 1630 aa40.94■■■■■ 4.14
FAM200B-222ENST00000515697 SHROOM4Q9ULL8 1493 aa40.84■■■■■ 4.13
FAM200B-222ENST00000515697 EIF4G1Q04637 1599 aaKnown RBP40.26■■■■■ 4.04
FAM200B-222ENST00000515697 CC2D2AQ9P2K1 1620 aa40.23■■■■■ 4.03
FAM200B-222ENST00000515697 CECR2Q9BXF3 1484 aa40■■■■□ 3.99
FAM200B-222ENST00000515697 SMARCA4P51532 1647 aa39.15■■■■□ 3.86
FAM200B-222ENST00000515697 NCAPD3P42695 1498 aa39.14■■■■□ 3.86
FAM200B-222ENST00000515697 ATAD2BQ9ULI0 1458 aa39.07■■■■□ 3.85
FAM200B-222ENST00000515697 BAZ1AQ9NRL2 1556 aaPredicted RBP38.99■■■■□ 3.83
FAM200B-222ENST00000515697 SMARCA2P51531 1590 aa38.97■■■■□ 3.83
FAM200B-222ENST00000515697 HMGXB3Q12766 1538 aa38.9■■■■□ 3.82
FAM200B-222ENST00000515697 PEG3Q9GZU2 1588 aa38.83■■■■□ 3.81
FAM200B-222ENST00000515697 MROH2BQ7Z745 1585 aa38.76■■■■□ 3.8
FAM200B-222ENST00000515697 BAZ1BQ9UIG0 1483 aaKnown RBP38.66■■■■□ 3.78
FAM200B-222ENST00000515697 NESP48681 1621 aa38.34■■■■□ 3.73
FAM200B-222ENST00000515697 WIZO95785 1651 aa38.31■■■■□ 3.72
FAM200B-222ENST00000515697 ERCC6Q03468 1493 aa38.28■■■■□ 3.72
FAM200B-222ENST00000515697 CUX2O14529 1486 aa38.16■■■■□ 3.7
FAM200B-222ENST00000515697 LAMC3Q9Y6N6 1575 aa38.16■■■■□ 3.7
FAM200B-222ENST00000515697 RSF1Q96T23 1441 aaPredicted RBP38.12■■■■□ 3.69
FAM200B-222ENST00000515697 THOC2Q8NI27 1593 aaKnown RBP37.93■■■■□ 3.66
FAM200B-222ENST00000515697 CADPSQ9ULU8 1353 aa37.93■■■■□ 3.66
FAM200B-222ENST00000515697 KIF21AQ7Z4S6 1674 aa37.9■■■■□ 3.66
FAM200B-222ENST00000515697 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
FAM200B-222ENST00000515697 TOP2AP11388 1531 aaKnown RBP37.87■■■■□ 3.65
FAM200B-222ENST00000515697 CFTRP13569 1480 aa37.63■■■■□ 3.61
FAM200B-222ENST00000515697 DNAJC5Q9H3Z4 198 aa37.6■■■■□ 3.61
FAM200B-222ENST00000515697 MRC2Q9UBG0 1479 aa37.55■■■■□ 3.6
FAM200B-222ENST00000515697 WDR62O43379 1518 aa37.5■■■■□ 3.59
FAM200B-222ENST00000515697 FANCD2Q9BXW9 1451 aa37.48■■■■□ 3.59
FAM200B-222ENST00000515697 CEP164Q9UPV0 1460 aa37.47■■■■□ 3.59
FAM200B-222ENST00000515697 CCDC88BA6NC98 1476 aa37.42■■■■□ 3.58
FAM200B-222ENST00000515697 PRDM2Q13029 1718 aa37.34■■■■□ 3.57
FAM200B-222ENST00000515697 URB2Q14146 1524 aaKnown RBP37.19■■■■□ 3.54
FAM200B-222ENST00000515697 TOPBP1Q92547 1522 aa36.85■■■■□ 3.49
FAM200B-222ENST00000515697 ABCC8Q09428 1581 aa36.78■■■■□ 3.48
FAM200B-222ENST00000515697 DNMBPQ6XZF7 1577 aa36.76■■■■□ 3.48
FAM200B-222ENST00000515697 IFT140Q96RY7 1462 aa36.73■■■■□ 3.47
FAM200B-222ENST00000515697 ZNF608Q9ULD9 1512 aaPredicted RBP36.64■■■■□ 3.46
FAM200B-222ENST00000515697 SUPT5HO00267 1087 aaKnown RBP36.59■■■■□ 3.45
FAM200B-222ENST00000515697 TARBP1Q13395 1621 aaKnown RBP36.54■■■■□ 3.44
FAM200B-222ENST00000515697 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
FAM200B-222ENST00000515697 EIF4G3O43432 1585 aaKnown RBP36.47■■■■□ 3.43
FAM200B-222ENST00000515697 OSCARQ8IYS5 282 aa36.41■■■■□ 3.42
FAM200B-222ENST00000515697 CUX1P39880 1505 aa36.4■■■■□ 3.42
FAM200B-222ENST00000515697 RAD54L2Q9Y4B4 1467 aa36.34■■■■□ 3.41
FAM200B-222ENST00000515697 AQRO60306 1485 aaKnown RBP eCLIP36.33■■■■□ 3.41
FAM200B-222ENST00000515697 FGD5Q6ZNL6 1462 aa36.32■■■■□ 3.41
FAM200B-222ENST00000515697 SOGA1O94964 1423 aa36.29■■■■□ 3.4
FAM200B-222ENST00000515697 WDR97A6NE52 1622 aa36.19■■■■□ 3.38
FAM200B-222ENST00000515697 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
FAM200B-222ENST00000515697 CHD1O14646 1710 aa36.13■■■■□ 3.37
FAM200B-222ENST00000515697 TRIM41Q8WV44 630 aa36.01■■■■□ 3.36
FAM200B-222ENST00000515697 ABCA10Q8WWZ4 1543 aa35.98■■■■□ 3.35
FAM200B-222ENST00000515697 SNAPC4Q5SXM2 1469 aa35.98■■■■□ 3.35
FAM200B-222ENST00000515697 RIMBP3CA6NJZ7 1639 aa35.97■■■■□ 3.35
FAM200B-222ENST00000515697 RIMBP3BA6NNM3 1639 aa35.97■■■■□ 3.35
FAM200B-222ENST00000515697 RIMBP3Q9UFD9 1639 aa35.97■■■■□ 3.35
FAM200B-222ENST00000515697 BIVM-ERCC5R4GMW8 1640 aa35.96■■■■□ 3.35
FAM200B-222ENST00000515697 GRIN2BQ13224 1484 aa35.95■■■■□ 3.35
FAM200B-222ENST00000515697 TOP2BQ02880 1626 aa35.94■■■■□ 3.34
FAM200B-222ENST00000515697 MAGI1Q96QZ7 1491 aaPredicted RBP35.93■■■■□ 3.34
FAM200B-222ENST00000515697 SYNJ1O43426 1573 aa35.91■■■■□ 3.34
FAM200B-222ENST00000515697 WRNQ14191 1432 aaPredicted RBP eCLIP35.91■■■■□ 3.34
FAM200B-222ENST00000515697 ABCA5Q8WWZ7 1642 aa35.9■■■■□ 3.34
FAM200B-222ENST00000515697 ARHGEF11O15085 1522 aa35.9■■■■□ 3.34
FAM200B-222ENST00000515697 PBRM1Q86U86 1689 aa35.89■■■■□ 3.34
FAM200B-222ENST00000515697 GAPVD1Q14C86 1478 aa35.88■■■■□ 3.33
FAM200B-222ENST00000515697 FBLN2P98095 1184 aa35.87■■■■□ 3.33
FAM200B-222ENST00000515697 SYNJ2O15056 1496 aa35.8■■■■□ 3.32
FAM200B-222ENST00000515697 CLASP1Q7Z460 1538 aa35.75■■■■□ 3.31
FAM200B-222ENST00000515697 CHMP7Q8WUX9 453 aaPredicted RBP35.72■■■■□ 3.31
FAM200B-222ENST00000515697 ARAP1Q96P48 1450 aa35.6■■■■□ 3.29
FAM200B-222ENST00000515697 ADAMTS12P58397 1594 aa35.58■■■■□ 3.29
FAM200B-222ENST00000515697 ERICH3Q5RHP9 1530 aa35.52■■■■□ 3.28
FAM200B-222ENST00000515697 GRIN2AQ12879 1464 aa35.51■■■■□ 3.28
FAM200B-222ENST00000515697 CYB5RLQ6IPT4 315 aa35.5■■■■□ 3.27
FAM200B-222ENST00000515697 FHAD1B1AJZ9 1412 aa35.45■■■■□ 3.27
FAM200B-222ENST00000515697 NUP160Q12769 1436 aa35.41■■■■□ 3.26
FAM200B-222ENST00000515697 CEP170Q5SW79 1584 aa35.38■■■■□ 3.25
FAM200B-222ENST00000515697 SHROOM2Q13796 1616 aa35.24■■■■□ 3.23
FAM200B-222ENST00000515697 ERCC6L2Q5T890 1561 aa35.21■■■■□ 3.23
FAM200B-222ENST00000515697 KIF27Q86VH2 1401 aa35.18■■■■□ 3.22
FAM200B-222ENST00000515697 IGF1RP08069 1367 aa35.16■■■■□ 3.22
FAM200B-222ENST00000515697 CUL7Q14999 1698 aa35.08■■■■□ 3.21
FAM200B-222ENST00000515697 RUSC2Q8N2Y8 1516 aa35.06■■■■□ 3.2
FAM200B-222ENST00000515697 PRG4Q92954 1404 aaPredicted RBP34.96■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms