RNA–Protein interactions for RNA: ENST00000505260.5

FAM200B-209, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 5

Gene FAM200B, Length 1,136 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-209ENST00000505260 NISCHQ9Y2I1 1504 aa44.57■■■■■ 4.73
FAM200B-209ENST00000505260 CCDC180Q9P1Z9 1646 aa39.4■■■■□ 3.9
FAM200B-209ENST00000505260 ABCC9O60706 1549 aa38.99■■■■□ 3.83
FAM200B-209ENST00000505260 DNAJC5BQ9UF47 199 aa37.71■■■■□ 3.63
FAM200B-209ENST00000505260 DCAF8L2P0C7V8 631 aa37.26■■■■□ 3.56
FAM200B-209ENST00000505260 ZCCHC6Q5VYS8 1495 aaKnown RBP37.17■■■■□ 3.54
FAM200B-209ENST00000505260 NACADO15069 1562 aa37.04■■■■□ 3.52
FAM200B-209ENST00000505260 RB1CC1Q8TDY2 1594 aa36.98■■■■□ 3.51
FAM200B-209ENST00000505260 MYO15BQ96JP2 1530 aa36.91■■■■□ 3.5
FAM200B-209ENST00000505260 DCAF1Q9Y4B6 1507 aa36.88■■■■□ 3.49
FAM200B-209ENST00000505260 PABPN1Q86U42 306 aaKnown RBP eCLIP36.17■■■■□ 3.38
FAM200B-209ENST00000505260 UNC13AQ9UPW8 1703 aa36.04■■■■□ 3.36
FAM200B-209ENST00000505260 SCRIBQ14160 1630 aa36.01■■■■□ 3.35
FAM200B-209ENST00000505260 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
FAM200B-209ENST00000505260 SHROOM4Q9ULL8 1493 aa35.48■■■■□ 3.27
FAM200B-209ENST00000505260 DNAJC5Q9H3Z4 198 aa35.38■■■■□ 3.25
FAM200B-209ENST00000505260 CECR2Q9BXF3 1484 aa35.23■■■■□ 3.23
FAM200B-209ENST00000505260 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
FAM200B-209ENST00000505260 EIF4G1Q04637 1599 aaKnown RBP34.86■■■■□ 3.17
FAM200B-209ENST00000505260 BAZ1AQ9NRL2 1556 aaPredicted RBP34.52■■■■□ 3.12
FAM200B-209ENST00000505260 SMARCA4P51532 1647 aa34.48■■■■□ 3.11
FAM200B-209ENST00000505260 MROH2BQ7Z745 1585 aa34.34■■■■□ 3.09
FAM200B-209ENST00000505260 ATAD2BQ9ULI0 1458 aa34.26■■■■□ 3.07
FAM200B-209ENST00000505260 SMARCA2P51531 1590 aa34.21■■■■□ 3.07
FAM200B-209ENST00000505260 NCAPD3P42695 1498 aa34.2■■■■□ 3.06
FAM200B-209ENST00000505260 PEG3Q9GZU2 1588 aa34.13■■■■□ 3.05
FAM200B-209ENST00000505260 RSF1Q96T23 1441 aaPredicted RBP34.11■■■■□ 3.05
FAM200B-209ENST00000505260 CUX2O14529 1486 aa34.03■■■■□ 3.04
FAM200B-209ENST00000505260 HMGXB3Q12766 1538 aa33.99■■■■□ 3.03
FAM200B-209ENST00000505260 BAZ1BQ9UIG0 1483 aaKnown RBP33.99■■■■□ 3.03
FAM200B-209ENST00000505260 WIZO95785 1651 aa33.97■■■■□ 3.03
FAM200B-209ENST00000505260 ERCC6Q03468 1493 aa33.68■■■□□ 2.98
FAM200B-209ENST00000505260 TOP2AP11388 1531 aaKnown RBP33.64■■■□□ 2.98
FAM200B-209ENST00000505260 SUPT5HO00267 1087 aaKnown RBP33.6■■■□□ 2.97
FAM200B-209ENST00000505260 TRIM41Q8WV44 630 aa33.31■■■□□ 2.92
FAM200B-209ENST00000505260 CCDC88BA6NC98 1476 aa33.3■■■□□ 2.92
FAM200B-209ENST00000505260 CADPSQ9ULU8 1353 aa33.24■■■□□ 2.91
FAM200B-209ENST00000505260 NESP48681 1621 aa33.23■■■□□ 2.91
FAM200B-209ENST00000505260 LAMC3Q9Y6N6 1575 aa33.2■■■□□ 2.91
FAM200B-209ENST00000505260 CFTRP13569 1480 aa33.08■■■□□ 2.89
FAM200B-209ENST00000505260 THOC2Q8NI27 1593 aaKnown RBP33.04■■■□□ 2.88
FAM200B-209ENST00000505260 PDS5BQ9NTI5 1447 aa33.03■■■□□ 2.88
FAM200B-209ENST00000505260 FANCD2Q9BXW9 1451 aa32.82■■■□□ 2.84
FAM200B-209ENST00000505260 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
FAM200B-209ENST00000505260 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
FAM200B-209ENST00000505260 PRDM2Q13029 1718 aa32.74■■■□□ 2.83
FAM200B-209ENST00000505260 MRC2Q9UBG0 1479 aa32.62■■■□□ 2.81
FAM200B-209ENST00000505260 WDR62O43379 1518 aa32.47■■■□□ 2.79
FAM200B-209ENST00000505260 URB2Q14146 1524 aaKnown RBP32.45■■■□□ 2.78
FAM200B-209ENST00000505260 ABCC8Q09428 1581 aa32.39■■■□□ 2.78
FAM200B-209ENST00000505260 TOPBP1Q92547 1522 aa32.32■■■□□ 2.76
FAM200B-209ENST00000505260 OSCARQ8IYS5 282 aa32.32■■■□□ 2.76
FAM200B-209ENST00000505260 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
FAM200B-209ENST00000505260 CUX1P39880 1505 aa32.19■■■□□ 2.74
FAM200B-209ENST00000505260 WRNQ14191 1432 aaPredicted RBP eCLIP32.16■■■□□ 2.74
FAM200B-209ENST00000505260 POLA1P09884 1462 aaPredicted RBP32.07■■■□□ 2.72
FAM200B-209ENST00000505260 IFT140Q96RY7 1462 aa32.06■■■□□ 2.72
FAM200B-209ENST00000505260 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
FAM200B-209ENST00000505260 SOGA1O94964 1423 aa32.01■■■□□ 2.72
FAM200B-209ENST00000505260 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
FAM200B-209ENST00000505260 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
FAM200B-209ENST00000505260 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
FAM200B-209ENST00000505260 TOP2BQ02880 1626 aa32■■■□□ 2.71
FAM200B-209ENST00000505260 SYNJ1O43426 1573 aa31.99■■■□□ 2.71
FAM200B-209ENST00000505260 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
FAM200B-209ENST00000505260 RAD54L2Q9Y4B4 1467 aa31.95■■■□□ 2.7
FAM200B-209ENST00000505260 TARBP1Q13395 1621 aaKnown RBP31.9■■■□□ 2.7
FAM200B-209ENST00000505260 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
FAM200B-209ENST00000505260 ARHGEF11O15085 1522 aa31.8■■■□□ 2.68
FAM200B-209ENST00000505260 TDRD9Q8NDG6 1382 aaKnown RBP31.78■■■□□ 2.68
FAM200B-209ENST00000505260 AQRO60306 1485 aaKnown RBP eCLIP31.77■■■□□ 2.68
FAM200B-209ENST00000505260 ABCA10Q8WWZ4 1543 aa31.76■■■□□ 2.68
FAM200B-209ENST00000505260 EIF4G3O43432 1585 aaKnown RBP31.69■■■□□ 2.66
FAM200B-209ENST00000505260 WDR97A6NE52 1622 aa31.68■■■□□ 2.66
FAM200B-209ENST00000505260 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
FAM200B-209ENST00000505260 TRHP20396 242 aaPredicted RBP31.63■■■□□ 2.65
FAM200B-209ENST00000505260 GAPVD1Q14C86 1478 aa31.61■■■□□ 2.65
FAM200B-209ENST00000505260 GRIN2BQ13224 1484 aa31.56■■■□□ 2.64
FAM200B-209ENST00000505260 ABCA5Q8WWZ7 1642 aa31.54■■■□□ 2.64
FAM200B-209ENST00000505260 CHIC1Q5VXU3 224 aa31.54■■■□□ 2.64
FAM200B-209ENST00000505260 AEBP2Q6ZN18 517 aaPredicted RBP31.51■■■□□ 2.63
FAM200B-209ENST00000505260 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
FAM200B-209ENST00000505260 SNAPC4Q5SXM2 1469 aa31.45■■■□□ 2.62
FAM200B-209ENST00000505260 ARAP1Q96P48 1450 aa31.44■■■□□ 2.62
FAM200B-209ENST00000505260 PBRM1Q86U86 1689 aa31.43■■■□□ 2.62
FAM200B-209ENST00000505260 MAGI1Q96QZ7 1491 aaPredicted RBP31.42■■■□□ 2.62
FAM200B-209ENST00000505260 FBLN2P98095 1184 aa31.4■■■□□ 2.62
FAM200B-209ENST00000505260 ERICH3Q5RHP9 1530 aa31.38■■■□□ 2.61
FAM200B-209ENST00000505260 CHMP7Q8WUX9 453 aaPredicted RBP31.36■■■□□ 2.61
FAM200B-209ENST00000505260 IGF1RP08069 1367 aa31.33■■■□□ 2.61
FAM200B-209ENST00000505260 SYNJ2O15056 1496 aa31.31■■■□□ 2.6
FAM200B-209ENST00000505260 RUSC2Q8N2Y8 1516 aa31.28■■■□□ 2.6
FAM200B-209ENST00000505260 FHAD1B1AJZ9 1412 aa31.27■■■□□ 2.6
FAM200B-209ENST00000505260 ADAMTS12P58397 1594 aa31.22■■■□□ 2.59
FAM200B-209ENST00000505260 CHD1O14646 1710 aa31.21■■■□□ 2.59
FAM200B-209ENST00000505260 CARMIL1Q5VZK9 1371 aa31.16■■■□□ 2.58
FAM200B-209ENST00000505260 GRIN2AQ12879 1464 aa31.14■■■□□ 2.57
FAM200B-209ENST00000505260 CUL7Q14999 1698 aa31.13■■■□□ 2.57
FAM200B-209ENST00000505260 EEA1Q15075 1411 aa31.11■■■□□ 2.57
FAM200B-209ENST00000505260 CSRNP3Q8WYN3 585 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms