RNA–Protein interactions for RNA: ENST00000511237.5

SH3BP2-219, Transcript of SH3 domain binding protein 2, humanhuman

TSL 5

Gene SH3BP2, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-219ENST00000511237 NISCHQ9Y2I1 1504 aa39.99■■■■□ 3.99
SH3BP2-219ENST00000511237 ABCC9O60706 1549 aa36.55■■■■□ 3.44
SH3BP2-219ENST00000511237 CCDC180Q9P1Z9 1646 aa35.94■■■■□ 3.34
SH3BP2-219ENST00000511237 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
SH3BP2-219ENST00000511237 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
SH3BP2-219ENST00000511237 DCAF8L2P0C7V8 631 aa34.27■■■■□ 3.08
SH3BP2-219ENST00000511237 NACADO15069 1562 aa34.19■■■■□ 3.06
SH3BP2-219ENST00000511237 PABPN1Q86U42 306 aaKnown RBP eCLIP34.08■■■■□ 3.05
SH3BP2-219ENST00000511237 UNC13AQ9UPW8 1703 aa33.59■■■□□ 2.97
SH3BP2-219ENST00000511237 MYO15BQ96JP2 1530 aa33.54■■■□□ 2.96
SH3BP2-219ENST00000511237 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
SH3BP2-219ENST00000511237 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
SH3BP2-219ENST00000511237 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
SH3BP2-219ENST00000511237 CECR2Q9BXF3 1484 aa32.97■■■□□ 2.87
SH3BP2-219ENST00000511237 DCAF1Q9Y4B6 1507 aa32.95■■■□□ 2.87
SH3BP2-219ENST00000511237 CC2D2AQ9P2K1 1620 aa32.91■■■□□ 2.86
SH3BP2-219ENST00000511237 SCRIBQ14160 1630 aa32.82■■■□□ 2.84
SH3BP2-219ENST00000511237 EIF4G1Q04637 1599 aaKnown RBP32.74■■■□□ 2.83
SH3BP2-219ENST00000511237 DNAJC5Q9H3Z4 198 aa32.24■■■□□ 2.75
SH3BP2-219ENST00000511237 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
SH3BP2-219ENST00000511237 CUX2O14529 1486 aa31.63■■■□□ 2.65
SH3BP2-219ENST00000511237 NCAPD3P42695 1498 aa31.61■■■□□ 2.65
SH3BP2-219ENST00000511237 ATAD2BQ9ULI0 1458 aa31.45■■■□□ 2.62
SH3BP2-219ENST00000511237 SMARCA2P51531 1590 aa31.32■■■□□ 2.6
SH3BP2-219ENST00000511237 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
SH3BP2-219ENST00000511237 NESP48681 1621 aa31.24■■■□□ 2.59
SH3BP2-219ENST00000511237 SMARCA4P51532 1647 aa31.23■■■□□ 2.59
SH3BP2-219ENST00000511237 BAZ1BQ9UIG0 1483 aaKnown RBP31.14■■■□□ 2.58
SH3BP2-219ENST00000511237 BAZ1AQ9NRL2 1556 aaPredicted RBP31.07■■■□□ 2.56
SH3BP2-219ENST00000511237 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
SH3BP2-219ENST00000511237 PEG3Q9GZU2 1588 aa30.9■■■□□ 2.54
SH3BP2-219ENST00000511237 PDS5BQ9NTI5 1447 aa30.88■■■□□ 2.53
SH3BP2-219ENST00000511237 THOC2Q8NI27 1593 aaKnown RBP30.88■■■□□ 2.53
SH3BP2-219ENST00000511237 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
SH3BP2-219ENST00000511237 TRIM41Q8WV44 630 aa30.72■■■□□ 2.51
SH3BP2-219ENST00000511237 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
SH3BP2-219ENST00000511237 CADPSQ9ULU8 1353 aa30.68■■■□□ 2.5
SH3BP2-219ENST00000511237 MRC2Q9UBG0 1479 aa30.55■■■□□ 2.48
SH3BP2-219ENST00000511237 WDR62O43379 1518 aa30.42■■■□□ 2.46
SH3BP2-219ENST00000511237 WIZO95785 1651 aa30.39■■■□□ 2.45
SH3BP2-219ENST00000511237 CEP164Q9UPV0 1460 aa30.36■■■□□ 2.45
SH3BP2-219ENST00000511237 OSCARQ8IYS5 282 aa30.31■■■□□ 2.44
SH3BP2-219ENST00000511237 FANCD2Q9BXW9 1451 aa30.3■■■□□ 2.44
SH3BP2-219ENST00000511237 CFTRP13569 1480 aa30.19■■■□□ 2.42
SH3BP2-219ENST00000511237 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
SH3BP2-219ENST00000511237 URB2Q14146 1524 aaKnown RBP30.02■■■□□ 2.4
SH3BP2-219ENST00000511237 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
SH3BP2-219ENST00000511237 IFT140Q96RY7 1462 aa29.78■■■□□ 2.36
SH3BP2-219ENST00000511237 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
SH3BP2-219ENST00000511237 RIMBP3CA6NJZ7 1639 aa29.72■■■□□ 2.35
SH3BP2-219ENST00000511237 RIMBP3BA6NNM3 1639 aa29.72■■■□□ 2.35
SH3BP2-219ENST00000511237 RIMBP3Q9UFD9 1639 aa29.72■■■□□ 2.35
SH3BP2-219ENST00000511237 CCDC88BA6NC98 1476 aa29.72■■■□□ 2.35
SH3BP2-219ENST00000511237 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
SH3BP2-219ENST00000511237 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
SH3BP2-219ENST00000511237 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
SH3BP2-219ENST00000511237 ARHGEF11O15085 1522 aa29.62■■■□□ 2.33
SH3BP2-219ENST00000511237 ABCC8Q09428 1581 aa29.61■■■□□ 2.33
SH3BP2-219ENST00000511237 FBLN2P98095 1184 aa29.56■■■□□ 2.32
SH3BP2-219ENST00000511237 TRHP20396 242 aaPredicted RBP29.51■■■□□ 2.31
SH3BP2-219ENST00000511237 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.31
SH3BP2-219ENST00000511237 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
SH3BP2-219ENST00000511237 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
SH3BP2-219ENST00000511237 TARBP1Q13395 1621 aaKnown RBP29.34■■■□□ 2.29
SH3BP2-219ENST00000511237 CHD1O14646 1710 aa29.32■■■□□ 2.28
SH3BP2-219ENST00000511237 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
SH3BP2-219ENST00000511237 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
SH3BP2-219ENST00000511237 TDRD9Q8NDG6 1382 aaKnown RBP29.29■■■□□ 2.28
SH3BP2-219ENST00000511237 SOGA1O94964 1423 aa29.28■■■□□ 2.28
SH3BP2-219ENST00000511237 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
SH3BP2-219ENST00000511237 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
SH3BP2-219ENST00000511237 SNAPC4Q5SXM2 1469 aa29.12■■■□□ 2.25
SH3BP2-219ENST00000511237 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
SH3BP2-219ENST00000511237 MAGI1Q96QZ7 1491 aaPredicted RBP29.03■■■□□ 2.24
SH3BP2-219ENST00000511237 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
SH3BP2-219ENST00000511237 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
SH3BP2-219ENST00000511237 WDR97A6NE52 1622 aa29.01■■■□□ 2.23
SH3BP2-219ENST00000511237 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
SH3BP2-219ENST00000511237 AEBP2Q6ZN18 517 aaPredicted RBP28.98■■■□□ 2.23
SH3BP2-219ENST00000511237 CUX1P39880 1505 aa28.95■■■□□ 2.23
SH3BP2-219ENST00000511237 SYNJ2O15056 1496 aa28.95■■■□□ 2.22
SH3BP2-219ENST00000511237 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
SH3BP2-219ENST00000511237 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
SH3BP2-219ENST00000511237 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
SH3BP2-219ENST00000511237 SUPT5HO00267 1087 aaKnown RBP28.63■■■□□ 2.17
SH3BP2-219ENST00000511237 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
SH3BP2-219ENST00000511237 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
SH3BP2-219ENST00000511237 GRIN2AQ12879 1464 aa28.6■■■□□ 2.17
SH3BP2-219ENST00000511237 ERCC6L2Q5T890 1561 aa28.54■■■□□ 2.16
SH3BP2-219ENST00000511237 NUP160Q12769 1436 aa28.51■■■□□ 2.15
SH3BP2-219ENST00000511237 FHAD1B1AJZ9 1412 aa28.49■■■□□ 2.15
SH3BP2-219ENST00000511237 CEP170Q5SW79 1584 aa28.49■■■□□ 2.15
SH3BP2-219ENST00000511237 ADAMTS12P58397 1594 aa28.45■■■□□ 2.14
SH3BP2-219ENST00000511237 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
SH3BP2-219ENST00000511237 PRG4Q92954 1404 aaPredicted RBP28.36■■■□□ 2.13
SH3BP2-219ENST00000511237 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
SH3BP2-219ENST00000511237 NPM1P06748 294 aaKnown RBP eCLIP28.35■■■□□ 2.13
SH3BP2-219ENST00000511237 SHROOM2Q13796 1616 aa28.35■■■□□ 2.13
SH3BP2-219ENST00000511237 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
SH3BP2-219ENST00000511237 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms