RNA–Protein interactions for RNA: ENST00000514803.1

FAM200B-220, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 2

Gene FAM200B, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-220ENST00000514803 NISCHQ9Y2I1 1504 aa52.03■■■■■ 5.92
FAM200B-220ENST00000514803 CCDC180Q9P1Z9 1646 aa46.32■■■■■ 5
FAM200B-220ENST00000514803 ABCC9O60706 1549 aa44.93■■■■■ 4.78
FAM200B-220ENST00000514803 ZCCHC6Q5VYS8 1495 aaKnown RBP43.45■■■■■ 4.55
FAM200B-220ENST00000514803 RB1CC1Q8TDY2 1594 aa43.4■■■■■ 4.54
FAM200B-220ENST00000514803 NACADO15069 1562 aa43.36■■■■■ 4.53
FAM200B-220ENST00000514803 DCAF8L2P0C7V8 631 aa43.29■■■■■ 4.52
FAM200B-220ENST00000514803 MYO15BQ96JP2 1530 aa43.12■■■■■ 4.49
FAM200B-220ENST00000514803 DCAF1Q9Y4B6 1507 aa43.06■■■■■ 4.48
FAM200B-220ENST00000514803 UNC13AQ9UPW8 1703 aa42.52■■■■■ 4.4
FAM200B-220ENST00000514803 SCRIBQ14160 1630 aa42.28■■■■■ 4.36
FAM200B-220ENST00000514803 BICRAQ9NZM4 1560 aa42■■■■■ 4.31
FAM200B-220ENST00000514803 PABPN1Q86U42 306 aaKnown RBP eCLIP41.9■■■■■ 4.3
FAM200B-220ENST00000514803 SHROOM4Q9ULL8 1493 aa41.63■■■■■ 4.25
FAM200B-220ENST00000514803 EIF4G1Q04637 1599 aaKnown RBP40.91■■■■■ 4.14
FAM200B-220ENST00000514803 DNAJC5BQ9UF47 199 aa40.75■■■■■ 4.11
FAM200B-220ENST00000514803 CC2D2AQ9P2K1 1620 aa40.7■■■■■ 4.11
FAM200B-220ENST00000514803 CECR2Q9BXF3 1484 aa40.46■■■■■ 4.07
FAM200B-220ENST00000514803 SMARCA4P51532 1647 aa40.42■■■■■ 4.06
FAM200B-220ENST00000514803 BAZ1AQ9NRL2 1556 aaPredicted RBP40.39■■■■■ 4.06
FAM200B-220ENST00000514803 MROH2BQ7Z745 1585 aa40.11■■■■■ 4.01
FAM200B-220ENST00000514803 SMARCA2P51531 1590 aa40.06■■■■■ 4
FAM200B-220ENST00000514803 ATAD2BQ9ULI0 1458 aa40■■■■□ 3.99
FAM200B-220ENST00000514803 PEG3Q9GZU2 1588 aa39.95■■■■□ 3.99
FAM200B-220ENST00000514803 NCAPD3P42695 1498 aa39.88■■■■□ 3.98
FAM200B-220ENST00000514803 HMGXB3Q12766 1538 aa39.87■■■■□ 3.97
FAM200B-220ENST00000514803 BAZ1BQ9UIG0 1483 aaKnown RBP39.79■■■■□ 3.96
FAM200B-220ENST00000514803 WIZO95785 1651 aa39.78■■■■□ 3.96
FAM200B-220ENST00000514803 RSF1Q96T23 1441 aaPredicted RBP39.68■■■■□ 3.94
FAM200B-220ENST00000514803 TOP2AP11388 1531 aaKnown RBP39.38■■■■□ 3.89
FAM200B-220ENST00000514803 LAMC3Q9Y6N6 1575 aa38.95■■■■□ 3.83
FAM200B-220ENST00000514803 NESP48681 1621 aa38.94■■■■□ 3.82
FAM200B-220ENST00000514803 SUPT5HO00267 1087 aaKnown RBP38.9■■■■□ 3.82
FAM200B-220ENST00000514803 CCDC88BA6NC98 1476 aa38.79■■■■□ 3.8
FAM200B-220ENST00000514803 ERCC6Q03468 1493 aa38.77■■■■□ 3.8
FAM200B-220ENST00000514803 CADPSQ9ULU8 1353 aa38.74■■■■□ 3.79
FAM200B-220ENST00000514803 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
FAM200B-220ENST00000514803 PRDM2Q13029 1718 aa38.64■■■■□ 3.78
FAM200B-220ENST00000514803 CFTRP13569 1480 aa38.6■■■■□ 3.77
FAM200B-220ENST00000514803 PDS5BQ9NTI5 1447 aa38.59■■■■□ 3.77
FAM200B-220ENST00000514803 FANCD2Q9BXW9 1451 aa38.41■■■■□ 3.74
FAM200B-220ENST00000514803 THOC2Q8NI27 1593 aaKnown RBP38.4■■■■□ 3.74
FAM200B-220ENST00000514803 CEP164Q9UPV0 1460 aa38.38■■■■□ 3.73
FAM200B-220ENST00000514803 MRC2Q9UBG0 1479 aa38.24■■■■□ 3.71
FAM200B-220ENST00000514803 CUX2O14529 1486 aa38.2■■■■□ 3.71
FAM200B-220ENST00000514803 WDR62O43379 1518 aa38.12■■■■□ 3.69
FAM200B-220ENST00000514803 URB2Q14146 1524 aaKnown RBP38■■■■□ 3.67
FAM200B-220ENST00000514803 DNMBPQ6XZF7 1577 aa37.86■■■■□ 3.65
FAM200B-220ENST00000514803 TOPBP1Q92547 1522 aa37.82■■■■□ 3.65
FAM200B-220ENST00000514803 ABCC8Q09428 1581 aa37.81■■■■□ 3.64
FAM200B-220ENST00000514803 CUX1P39880 1505 aa37.64■■■■□ 3.62
FAM200B-220ENST00000514803 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
FAM200B-220ENST00000514803 POLA1P09884 1462 aaPredicted RBP37.51■■■■□ 3.59
FAM200B-220ENST00000514803 FGD5Q6ZNL6 1462 aa37.49■■■■□ 3.59
FAM200B-220ENST00000514803 BIVM-ERCC5R4GMW8 1640 aa37.48■■■■□ 3.59
FAM200B-220ENST00000514803 WRNQ14191 1432 aaPredicted RBP eCLIP37.48■■■■□ 3.59
FAM200B-220ENST00000514803 SYNJ1O43426 1573 aa37.46■■■■□ 3.59
FAM200B-220ENST00000514803 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
FAM200B-220ENST00000514803 TARBP1Q13395 1621 aaKnown RBP37.41■■■■□ 3.58
FAM200B-220ENST00000514803 EIF4G3O43432 1585 aaKnown RBP37.32■■■■□ 3.56
FAM200B-220ENST00000514803 RAD54L2Q9Y4B4 1467 aa37.32■■■■□ 3.56
FAM200B-220ENST00000514803 SOGA1O94964 1423 aa37.3■■■■□ 3.56
FAM200B-220ENST00000514803 ZNF608Q9ULD9 1512 aaPredicted RBP37.3■■■■□ 3.56
FAM200B-220ENST00000514803 WDR97A6NE52 1622 aa37.29■■■■□ 3.56
FAM200B-220ENST00000514803 ABCA10Q8WWZ4 1543 aa37.1■■■■□ 3.53
FAM200B-220ENST00000514803 AQRO60306 1485 aaKnown RBP eCLIP37.08■■■■□ 3.53
FAM200B-220ENST00000514803 TDRD9Q8NDG6 1382 aaKnown RBP37.04■■■■□ 3.52
FAM200B-220ENST00000514803 PBRM1Q86U86 1689 aa37.04■■■■□ 3.52
FAM200B-220ENST00000514803 ABCA5Q8WWZ7 1642 aa37.03■■■■□ 3.52
FAM200B-220ENST00000514803 GAPVD1Q14C86 1478 aa36.93■■■■□ 3.5
FAM200B-220ENST00000514803 GRIN2BQ13224 1484 aa36.89■■■■□ 3.5
FAM200B-220ENST00000514803 SNAPC4Q5SXM2 1469 aa36.86■■■■□ 3.49
FAM200B-220ENST00000514803 CHD1O14646 1710 aa36.84■■■■□ 3.49
FAM200B-220ENST00000514803 MAGI1Q96QZ7 1491 aaPredicted RBP36.8■■■■□ 3.48
FAM200B-220ENST00000514803 ERICH3Q5RHP9 1530 aa36.7■■■■□ 3.47
FAM200B-220ENST00000514803 TRIM41Q8WV44 630 aa36.7■■■■□ 3.47
FAM200B-220ENST00000514803 ADAMTS12P58397 1594 aa36.69■■■■□ 3.46
FAM200B-220ENST00000514803 KIF27Q86VH2 1401 aa36.68■■■■□ 3.46
FAM200B-220ENST00000514803 SYNJ2O15056 1496 aa36.63■■■■□ 3.45
FAM200B-220ENST00000514803 FBLN2P98095 1184 aa36.6■■■■□ 3.45
FAM200B-220ENST00000514803 CUL7Q14999 1698 aa36.53■■■■□ 3.44
FAM200B-220ENST00000514803 OSCARQ8IYS5 282 aa36.52■■■■□ 3.44
FAM200B-220ENST00000514803 CHMP7Q8WUX9 453 aaPredicted RBP36.51■■■■□ 3.44
FAM200B-220ENST00000514803 DNAJC5Q9H3Z4 198 aa36.51■■■■□ 3.44
FAM200B-220ENST00000514803 FHAD1B1AJZ9 1412 aa36.5■■■■□ 3.43
FAM200B-220ENST00000514803 GRIN2AQ12879 1464 aa36.44■■■■□ 3.42
FAM200B-220ENST00000514803 RUSC2Q8N2Y8 1516 aa36.38■■■■□ 3.41
FAM200B-220ENST00000514803 CHIC1Q5VXU3 224 aa36.37■■■■□ 3.41
FAM200B-220ENST00000514803 IGF1RP08069 1367 aa36.35■■■■□ 3.41
FAM200B-220ENST00000514803 CLASP1Q7Z460 1538 aa36.31■■■■□ 3.4
FAM200B-220ENST00000514803 CEP170Q5SW79 1584 aa36.29■■■■□ 3.4
FAM200B-220ENST00000514803 CARMIL1Q5VZK9 1371 aa36.22■■■■□ 3.39
FAM200B-220ENST00000514803 NUP160Q12769 1436 aa36.21■■■■□ 3.39
FAM200B-220ENST00000514803 EEA1Q15075 1411 aa36.16■■■■□ 3.38
FAM200B-220ENST00000514803 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
FAM200B-220ENST00000514803 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
FAM200B-220ENST00000514803 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
FAM200B-220ENST00000514803 RAPGEF2Q9Y4G8 1499 aa36.11■■■■□ 3.37
FAM200B-220ENST00000514803 ARHGEF11O15085 1522 aa36.09■■■■□ 3.37
FAM200B-220ENST00000514803 SHROOM2Q13796 1616 aa36.01■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms