RNA–Protein interactions for RNA: ENST00000510920.5

FAM200B-217, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 3

Gene FAM200B, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-217ENST00000510920 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
FAM200B-217ENST00000510920 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
FAM200B-217ENST00000510920 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
FAM200B-217ENST00000510920 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
FAM200B-217ENST00000510920 ABCC9O60706 1549 aa25.98■■□□□ 1.75
FAM200B-217ENST00000510920 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
FAM200B-217ENST00000510920 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
FAM200B-217ENST00000510920 NACADO15069 1562 aa24.88■■□□□ 1.57
FAM200B-217ENST00000510920 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
FAM200B-217ENST00000510920 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
FAM200B-217ENST00000510920 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
FAM200B-217ENST00000510920 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
FAM200B-217ENST00000510920 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
FAM200B-217ENST00000510920 PABPN1Q86U42 306 aaKnown RBP eCLIP24.28■■□□□ 1.48
FAM200B-217ENST00000510920 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
FAM200B-217ENST00000510920 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
FAM200B-217ENST00000510920 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
FAM200B-217ENST00000510920 SHROOM4Q9ULL8 1493 aa23.9■■□□□ 1.42
FAM200B-217ENST00000510920 DNAJC5BQ9UF47 199 aa23.82■■□□□ 1.4
FAM200B-217ENST00000510920 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
FAM200B-217ENST00000510920 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
FAM200B-217ENST00000510920 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
FAM200B-217ENST00000510920 SMARCA4P51532 1647 aa23.09■■□□□ 1.29
FAM200B-217ENST00000510920 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
FAM200B-217ENST00000510920 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
FAM200B-217ENST00000510920 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
FAM200B-217ENST00000510920 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
FAM200B-217ENST00000510920 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
FAM200B-217ENST00000510920 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
FAM200B-217ENST00000510920 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
FAM200B-217ENST00000510920 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
FAM200B-217ENST00000510920 FOXD1Q16676 465 aa22.7■■□□□ 1.22
FAM200B-217ENST00000510920 WIZO95785 1651 aa22.68■■□□□ 1.22
FAM200B-217ENST00000510920 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
FAM200B-217ENST00000510920 NESP48681 1621 aa22.45■■□□□ 1.18
FAM200B-217ENST00000510920 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
FAM200B-217ENST00000510920 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
FAM200B-217ENST00000510920 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
FAM200B-217ENST00000510920 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
FAM200B-217ENST00000510920 PDS5BQ9NTI5 1447 aa22.25■■□□□ 1.15
FAM200B-217ENST00000510920 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
FAM200B-217ENST00000510920 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
FAM200B-217ENST00000510920 CUX2O14529 1486 aa22.15■■□□□ 1.14
FAM200B-217ENST00000510920 CFTRP13569 1480 aa22.14■■□□□ 1.13
FAM200B-217ENST00000510920 SUPT5HO00267 1087 aaKnown RBP22.13■■□□□ 1.13
FAM200B-217ENST00000510920 THOC2Q8NI27 1593 aaKnown RBP22.09■■□□□ 1.13
FAM200B-217ENST00000510920 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
FAM200B-217ENST00000510920 CEP164Q9UPV0 1460 aa22.05■■□□□ 1.12
FAM200B-217ENST00000510920 MRC2Q9UBG0 1479 aa22.02■■□□□ 1.12
FAM200B-217ENST00000510920 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
FAM200B-217ENST00000510920 WDR62O43379 1518 aa21.92■■□□□ 1.1
FAM200B-217ENST00000510920 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
FAM200B-217ENST00000510920 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
FAM200B-217ENST00000510920 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
FAM200B-217ENST00000510920 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
FAM200B-217ENST00000510920 MSH5O43196 834 aa21.59■■□□□ 1.05
FAM200B-217ENST00000510920 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
FAM200B-217ENST00000510920 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
FAM200B-217ENST00000510920 CUX1P39880 1505 aa21.5■■□□□ 1.03
FAM200B-217ENST00000510920 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
FAM200B-217ENST00000510920 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
FAM200B-217ENST00000510920 FGD5Q6ZNL6 1462 aa21.46■■□□□ 1.03
FAM200B-217ENST00000510920 PLPPR3Q6T4P5 718 aa21.45■■□□□ 1.02
FAM200B-217ENST00000510920 SOGA1O94964 1423 aa21.44■■□□□ 1.02
FAM200B-217ENST00000510920 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
FAM200B-217ENST00000510920 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
FAM200B-217ENST00000510920 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
FAM200B-217ENST00000510920 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
FAM200B-217ENST00000510920 AQRO60306 1485 aaKnown RBP eCLIP21.36■■□□□ 1.01
FAM200B-217ENST00000510920 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1
FAM200B-217ENST00000510920 SYNJ1O43426 1573 aa21.31■■□□□ 1
FAM200B-217ENST00000510920 TOP2BQ02880 1626 aa21.31■■□□□ 1
FAM200B-217ENST00000510920 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
FAM200B-217ENST00000510920 POTEDQ86YR6 584 aa21.3■■□□□ 1
FAM200B-217ENST00000510920 WDR97A6NE52 1622 aa21.27■■□□□ 1
FAM200B-217ENST00000510920 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
FAM200B-217ENST00000510920 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
FAM200B-217ENST00000510920 PIAS4Q8N2W9 510 aaPredicted RBP21.22■□□□□ 0.99
FAM200B-217ENST00000510920 FBLN2P98095 1184 aa21.2■□□□□ 0.98
FAM200B-217ENST00000510920 GRIN2BQ13224 1484 aa21.19■□□□□ 0.98
FAM200B-217ENST00000510920 GAPVD1Q14C86 1478 aa21.19■□□□□ 0.98
FAM200B-217ENST00000510920 SNAPC4Q5SXM2 1469 aa21.18■□□□□ 0.98
FAM200B-217ENST00000510920 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
FAM200B-217ENST00000510920 CHD1O14646 1710 aa21.14■□□□□ 0.97
FAM200B-217ENST00000510920 PBRM1Q86U86 1689 aa21.14■□□□□ 0.97
FAM200B-217ENST00000510920 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
FAM200B-217ENST00000510920 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
FAM200B-217ENST00000510920 SYNJ2O15056 1496 aa21.05■□□□□ 0.96
FAM200B-217ENST00000510920 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
FAM200B-217ENST00000510920 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
FAM200B-217ENST00000510920 KIF27Q86VH2 1401 aa20.95■□□□□ 0.94
FAM200B-217ENST00000510920 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
FAM200B-217ENST00000510920 PPP6R1Q9UPN7 881 aa20.92■□□□□ 0.94
FAM200B-217ENST00000510920 GRIN2AQ12879 1464 aa20.91■□□□□ 0.94
FAM200B-217ENST00000510920 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.94
FAM200B-217ENST00000510920 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.94
FAM200B-217ENST00000510920 RIMBP3Q9UFD9 1639 aa20.89■□□□□ 0.94
FAM200B-217ENST00000510920 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
FAM200B-217ENST00000510920 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
FAM200B-217ENST00000510920 ADRA2BP18089 450 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms