RNA–Protein interactions for RNA: ENST00000536376.5

ATP2A1-203, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 2 BASIC

Gene ATP2A1, Length 3,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-203ENST00000536376 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
ATP2A1-203ENST00000536376 SHROOM4Q9ULL8 1493 aa20.72■□□□□ 0.91
ATP2A1-203ENST00000536376 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
ATP2A1-203ENST00000536376 HRCP23327 699 aa20■□□□□ 0.79
ATP2A1-203ENST00000536376 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
ATP2A1-203ENST00000536376 PCGF6Q9BYE7 350 aa19.93■□□□□ 0.78
ATP2A1-203ENST00000536376 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
ATP2A1-203ENST00000536376 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
ATP2A1-203ENST00000536376 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
ATP2A1-203ENST00000536376 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
ATP2A1-203ENST00000536376 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
ATP2A1-203ENST00000536376 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
ATP2A1-203ENST00000536376 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
ATP2A1-203ENST00000536376 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
ATP2A1-203ENST00000536376 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
ATP2A1-203ENST00000536376 FAM9AQ8IZU1 332 aaPredicted RBP19.04■□□□□ 0.64
ATP2A1-203ENST00000536376 TRIM41Q8WV44 630 aa18.89■□□□□ 0.62
ATP2A1-203ENST00000536376 ZEB1P37275 1124 aaPredicted RBP18.84■□□□□ 0.61
ATP2A1-203ENST00000536376 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
ATP2A1-203ENST00000536376 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
ATP2A1-203ENST00000536376 ABCC9O60706 1549 aa18.66■□□□□ 0.58
ATP2A1-203ENST00000536376 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
ATP2A1-203ENST00000536376 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
ATP2A1-203ENST00000536376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
ATP2A1-203ENST00000536376 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.57
ATP2A1-203ENST00000536376 TTBK1Q5TCY1 1321 aaPredicted RBP18.54■□□□□ 0.56
ATP2A1-203ENST00000536376 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
ATP2A1-203ENST00000536376 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
ATP2A1-203ENST00000536376 ACIN1Q9UKV3 1341 aaKnown RBP18.4■□□□□ 0.54
ATP2A1-203ENST00000536376 GTF3C3Q9Y5Q9 886 aa18.33■□□□□ 0.53
ATP2A1-203ENST00000536376 DIEXFQ68CQ4 756 aaKnown RBP18.32■□□□□ 0.52
ATP2A1-203ENST00000536376 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
ATP2A1-203ENST00000536376 MROH2BQ7Z745 1585 aa18.22■□□□□ 0.51
ATP2A1-203ENST00000536376 CENPBP07199 599 aaPredicted RBP18.21■□□□□ 0.51
ATP2A1-203ENST00000536376 YTHDC1Q96MU7 727 aaKnown RBP18.18■□□□□ 0.5
ATP2A1-203ENST00000536376 WIZO95785 1651 aa18.16■□□□□ 0.5
ATP2A1-203ENST00000536376 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
ATP2A1-203ENST00000536376 ABCC8Q09428 1581 aa18.02■□□□□ 0.47
ATP2A1-203ENST00000536376 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
ATP2A1-203ENST00000536376 CEP162Q5TB80 1403 aa17.99■□□□□ 0.47
ATP2A1-203ENST00000536376 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
ATP2A1-203ENST00000536376 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
ATP2A1-203ENST00000536376 SOGA1O94964 1423 aa17.95■□□□□ 0.46
ATP2A1-203ENST00000536376 MIER1Q8N108 512 aa17.92■□□□□ 0.46
ATP2A1-203ENST00000536376 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
ATP2A1-203ENST00000536376 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
ATP2A1-203ENST00000536376 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
ATP2A1-203ENST00000536376 EIF4G1Q04637 1599 aaKnown RBP17.86■□□□□ 0.45
ATP2A1-203ENST00000536376 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
ATP2A1-203ENST00000536376 NACADO15069 1562 aa17.85■□□□□ 0.45
ATP2A1-203ENST00000536376 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
ATP2A1-203ENST00000536376 TNIKQ9UKE5 1360 aa17.82■□□□□ 0.44
ATP2A1-203ENST00000536376 MYT1Q01538 1121 aa17.74■□□□□ 0.43
ATP2A1-203ENST00000536376 TOP2AP11388 1531 aaKnown RBP17.7■□□□□ 0.42
ATP2A1-203ENST00000536376 SMARCA2P51531 1590 aa17.68■□□□□ 0.42
ATP2A1-203ENST00000536376 GOLGA3Q08378 1498 aa17.65■□□□□ 0.42
ATP2A1-203ENST00000536376 APLP2Q06481 763 aa17.64■□□□□ 0.41
ATP2A1-203ENST00000536376 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
ATP2A1-203ENST00000536376 EEA1Q15075 1411 aa17.59■□□□□ 0.41
ATP2A1-203ENST00000536376 CLIP1P30622 1438 aa17.57■□□□□ 0.4
ATP2A1-203ENST00000536376 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATP2A1-203ENST00000536376 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
ATP2A1-203ENST00000536376 SUPT16HQ9Y5B9 1047 aaKnown RBP17.46■□□□□ 0.39
ATP2A1-203ENST00000536376 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
ATP2A1-203ENST00000536376 RAPGEF2Q9Y4G8 1499 aa17.43■□□□□ 0.38
ATP2A1-203ENST00000536376 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
ATP2A1-203ENST00000536376 ITGAEP38570 1179 aa17.41■□□□□ 0.38
ATP2A1-203ENST00000536376 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
ATP2A1-203ENST00000536376 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
ATP2A1-203ENST00000536376 KCNH8Q96L42 1107 aa17.35■□□□□ 0.37
ATP2A1-203ENST00000536376 KIF21BO75037 1637 aa17.34■□□□□ 0.37
ATP2A1-203ENST00000536376 BCANQ96GW7 911 aa17.34■□□□□ 0.37
ATP2A1-203ENST00000536376 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
ATP2A1-203ENST00000536376 TSHZ2Q9NRE2 1034 aa17.29■□□□□ 0.36
ATP2A1-203ENST00000536376 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
ATP2A1-203ENST00000536376 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
ATP2A1-203ENST00000536376 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
ATP2A1-203ENST00000536376 DDX10Q13206 875 aaKnown RBP17.15■□□□□ 0.34
ATP2A1-203ENST00000536376 FKBP8Q14318 412 aa17.15■□□□□ 0.34
ATP2A1-203ENST00000536376 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
ATP2A1-203ENST00000536376 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
ATP2A1-203ENST00000536376 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
ATP2A1-203ENST00000536376 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
ATP2A1-203ENST00000536376 CCNB3Q8WWL7 1395 aa17.1■□□□□ 0.33
ATP2A1-203ENST00000536376 SIN3AQ96ST3 1273 aa17.09■□□□□ 0.33
ATP2A1-203ENST00000536376 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
ATP2A1-203ENST00000536376 RAB3GAP2Q9H2M9 1393 aa17.06■□□□□ 0.32
ATP2A1-203ENST00000536376 RRBP1Q9P2E9 1410 aaKnown RBP17.06■□□□□ 0.32
ATP2A1-203ENST00000536376 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
ATP2A1-203ENST00000536376 PRXQ9BXM0 1461 aa17.04■□□□□ 0.32
ATP2A1-203ENST00000536376 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
ATP2A1-203ENST00000536376 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
ATP2A1-203ENST00000536376 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
ATP2A1-203ENST00000536376 NEFLP07196 543 aa16.98■□□□□ 0.31
ATP2A1-203ENST00000536376 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
ATP2A1-203ENST00000536376 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
ATP2A1-203ENST00000536376 ARHGAP35Q9NRY4 1499 aa16.96■□□□□ 0.31
ATP2A1-203ENST00000536376 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
ATP2A1-203ENST00000536376 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
ATP2A1-203ENST00000536376 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms