RNA–Protein interactions for RNA: ENST00000564948.1

CX3CL1-203, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 3 BASIC

Gene CX3CL1, Length 563 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-203ENST00000564948 NISCHQ9Y2I1 1504 aa37.42■■■■□ 3.58
CX3CL1-203ENST00000564948 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
CX3CL1-203ENST00000564948 ABCC9O60706 1549 aa33.28■■■□□ 2.92
CX3CL1-203ENST00000564948 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
CX3CL1-203ENST00000564948 NACADO15069 1562 aa31.64■■■□□ 2.65
CX3CL1-203ENST00000564948 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
CX3CL1-203ENST00000564948 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
CX3CL1-203ENST00000564948 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
CX3CL1-203ENST00000564948 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
CX3CL1-203ENST00000564948 DNAJC5BQ9UF47 199 aa30.97■■■□□ 2.55
CX3CL1-203ENST00000564948 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
CX3CL1-203ENST00000564948 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.55
CX3CL1-203ENST00000564948 BICRAQ9NZM4 1560 aa30.8■■■□□ 2.52
CX3CL1-203ENST00000564948 SHROOM4Q9ULL8 1493 aa30.52■■■□□ 2.48
CX3CL1-203ENST00000564948 SCRIBQ14160 1630 aa30.51■■■□□ 2.48
CX3CL1-203ENST00000564948 EIF4G1Q04637 1599 aaKnown RBP30.07■■■□□ 2.4
CX3CL1-203ENST00000564948 CC2D2AQ9P2K1 1620 aa30.06■■■□□ 2.4
CX3CL1-203ENST00000564948 CECR2Q9BXF3 1484 aa29.98■■■□□ 2.39
CX3CL1-203ENST00000564948 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
CX3CL1-203ENST00000564948 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
CX3CL1-203ENST00000564948 ATAD2BQ9ULI0 1458 aa29.13■■■□□ 2.25
CX3CL1-203ENST00000564948 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
CX3CL1-203ENST00000564948 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
CX3CL1-203ENST00000564948 HMGXB3Q12766 1538 aa29.01■■■□□ 2.23
CX3CL1-203ENST00000564948 BAZ1BQ9UIG0 1483 aaKnown RBP28.88■■■□□ 2.21
CX3CL1-203ENST00000564948 PEG3Q9GZU2 1588 aa28.87■■■□□ 2.21
CX3CL1-203ENST00000564948 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
CX3CL1-203ENST00000564948 ERCC6Q03468 1493 aa28.77■■■□□ 2.2
CX3CL1-203ENST00000564948 CUX2O14529 1486 aa28.65■■■□□ 2.18
CX3CL1-203ENST00000564948 NESP48681 1621 aa28.62■■■□□ 2.17
CX3CL1-203ENST00000564948 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
CX3CL1-203ENST00000564948 WIZO95785 1651 aa28.45■■■□□ 2.15
CX3CL1-203ENST00000564948 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
CX3CL1-203ENST00000564948 DNAJC5Q9H3Z4 198 aa28.34■■■□□ 2.13
CX3CL1-203ENST00000564948 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
CX3CL1-203ENST00000564948 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
CX3CL1-203ENST00000564948 THOC2Q8NI27 1593 aaKnown RBP28.31■■■□□ 2.12
CX3CL1-203ENST00000564948 KIF21AQ7Z4S6 1674 aa28.24■■■□□ 2.11
CX3CL1-203ENST00000564948 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
CX3CL1-203ENST00000564948 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
CX3CL1-203ENST00000564948 CFTRP13569 1480 aa28.04■■■□□ 2.08
CX3CL1-203ENST00000564948 CEP164Q9UPV0 1460 aa28.03■■■□□ 2.08
CX3CL1-203ENST00000564948 WDR62O43379 1518 aa28■■■□□ 2.07
CX3CL1-203ENST00000564948 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
CX3CL1-203ENST00000564948 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.04
CX3CL1-203ENST00000564948 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
CX3CL1-203ENST00000564948 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
CX3CL1-203ENST00000564948 ABCC8Q09428 1581 aa27.49■■□□□ 1.99
CX3CL1-203ENST00000564948 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
CX3CL1-203ENST00000564948 IFT140Q96RY7 1462 aa27.47■■□□□ 1.99
CX3CL1-203ENST00000564948 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
CX3CL1-203ENST00000564948 OSCARQ8IYS5 282 aa27.36■■□□□ 1.97
CX3CL1-203ENST00000564948 ZNF608Q9ULD9 1512 aaPredicted RBP27.35■■□□□ 1.97
CX3CL1-203ENST00000564948 EIF4G3O43432 1585 aaKnown RBP27.22■■□□□ 1.95
CX3CL1-203ENST00000564948 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
CX3CL1-203ENST00000564948 SUPT5HO00267 1087 aaKnown RBP27.22■■□□□ 1.95
CX3CL1-203ENST00000564948 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
CX3CL1-203ENST00000564948 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
CX3CL1-203ENST00000564948 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.932e-7■■■■■ 27.7
CX3CL1-203ENST00000564948 SOGA1O94964 1423 aa27.11■■□□□ 1.93
CX3CL1-203ENST00000564948 RAD54L2Q9Y4B4 1467 aa27.09■■□□□ 1.93
CX3CL1-203ENST00000564948 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
CX3CL1-203ENST00000564948 CUX1P39880 1505 aa27.07■■□□□ 1.92
CX3CL1-203ENST00000564948 WDR97A6NE52 1622 aa27.01■■□□□ 1.91
CX3CL1-203ENST00000564948 TDRD9Q8NDG6 1382 aaKnown RBP27■■□□□ 1.91
CX3CL1-203ENST00000564948 FBLN2P98095 1184 aa26.94■■□□□ 1.9
CX3CL1-203ENST00000564948 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
CX3CL1-203ENST00000564948 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
CX3CL1-203ENST00000564948 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
CX3CL1-203ENST00000564948 CHD1O14646 1710 aa26.93■■□□□ 1.9
CX3CL1-203ENST00000564948 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
CX3CL1-203ENST00000564948 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
CX3CL1-203ENST00000564948 GRIN2BQ13224 1484 aa26.87■■□□□ 1.89
CX3CL1-203ENST00000564948 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
CX3CL1-203ENST00000564948 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
CX3CL1-203ENST00000564948 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
CX3CL1-203ENST00000564948 GAPVD1Q14C86 1478 aa26.79■■□□□ 1.88
CX3CL1-203ENST00000564948 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
CX3CL1-203ENST00000564948 WRNQ14191 1432 aaPredicted RBP eCLIP26.74■■□□□ 1.87
CX3CL1-203ENST00000564948 SYNJ1O43426 1573 aa26.72■■□□□ 1.87
CX3CL1-203ENST00000564948 PBRM1Q86U86 1689 aa26.72■■□□□ 1.87
CX3CL1-203ENST00000564948 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
CX3CL1-203ENST00000564948 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
CX3CL1-203ENST00000564948 BIVM-ERCC5R4GMW8 1640 aa26.69■■□□□ 1.86
CX3CL1-203ENST00000564948 CYB5RLQ6IPT4 315 aa26.69■■□□□ 1.86
CX3CL1-203ENST00000564948 CLASP1Q7Z460 1538 aa26.68■■□□□ 1.86
CX3CL1-203ENST00000564948 ARAP1Q96P48 1450 aa26.64■■□□□ 1.86
CX3CL1-203ENST00000564948 ADAMTS12P58397 1594 aa26.51■■□□□ 1.83
CX3CL1-203ENST00000564948 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
CX3CL1-203ENST00000564948 FHAD1B1AJZ9 1412 aa26.48■■□□□ 1.83
CX3CL1-203ENST00000564948 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
CX3CL1-203ENST00000564948 NUP160Q12769 1436 aa26.41■■□□□ 1.82
CX3CL1-203ENST00000564948 CEP170Q5SW79 1584 aa26.37■■□□□ 1.81
CX3CL1-203ENST00000564948 TRHP20396 242 aaPredicted RBP26.35■■□□□ 1.81
CX3CL1-203ENST00000564948 SHROOM2Q13796 1616 aa26.24■■□□□ 1.79
CX3CL1-203ENST00000564948 ERCC6L2Q5T890 1561 aa26.24■■□□□ 1.79
CX3CL1-203ENST00000564948 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
CX3CL1-203ENST00000564948 IGF1RP08069 1367 aa26.15■■□□□ 1.78
CX3CL1-203ENST00000564948 JPH4Q96JJ6 628 aa26.14■■□□□ 1.78
CX3CL1-203ENST00000564948 PRG4Q92954 1404 aaPredicted RBP26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms