RNA–Protein interactions for RNA: ENST00000472694.1

HBA1-203, Transcript of hemoglobin subunit alpha 1, humanhuman

TSL 1 (best)

Gene HBA1, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1-203ENST00000472694 NISCHQ9Y2I1 1504 aa43.43■■■■■ 4.54
HBA1-203ENST00000472694 CCDC180Q9P1Z9 1646 aa38.79■■■■□ 3.8
HBA1-203ENST00000472694 ABCC9O60706 1549 aa38.42■■■■□ 3.74
HBA1-203ENST00000472694 RB1CC1Q8TDY2 1594 aa36.77■■■■□ 3.48
HBA1-203ENST00000472694 DCAF8L2P0C7V8 631 aa36.62■■■■□ 3.45
HBA1-203ENST00000472694 NACADO15069 1562 aa36.61■■■■□ 3.45
HBA1-203ENST00000472694 MYO15BQ96JP2 1530 aa36.22■■■■□ 3.39
HBA1-203ENST00000472694 ZCCHC6Q5VYS8 1495 aaKnown RBP36.07■■■■□ 3.37
HBA1-203ENST00000472694 DCAF1Q9Y4B6 1507 aa35.9■■■■□ 3.34
HBA1-203ENST00000472694 PABPN1Q86U42 306 aaKnown RBP eCLIP35.85■■■■□ 3.33
HBA1-203ENST00000472694 UNC13AQ9UPW8 1703 aa35.8■■■■□ 3.32
HBA1-203ENST00000472694 DNAJC5BQ9UF47 199 aa35.6■■■■□ 3.29
HBA1-203ENST00000472694 BICRAQ9NZM4 1560 aa35.58■■■■□ 3.29
HBA1-203ENST00000472694 SCRIBQ14160 1630 aa35.38■■■■□ 3.25
HBA1-203ENST00000472694 SHROOM4Q9ULL8 1493 aa35.25■■■■□ 3.23
HBA1-203ENST00000472694 EIF4G1Q04637 1599 aaKnown RBP34.73■■■■□ 3.15
HBA1-203ENST00000472694 CC2D2AQ9P2K1 1620 aa34.7■■■■□ 3.14
HBA1-203ENST00000472694 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
HBA1-203ENST00000472694 SMARCA4P51532 1647 aa33.79■■■■□ 3
HBA1-203ENST00000472694 NCAPD3P42695 1498 aa33.78■■■■□ 3
HBA1-203ENST00000472694 ATAD2BQ9ULI0 1458 aa33.72■■■□□ 2.99
HBA1-203ENST00000472694 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
HBA1-203ENST00000472694 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
HBA1-203ENST00000472694 HMGXB3Q12766 1538 aa33.56■■■□□ 2.96
HBA1-203ENST00000472694 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
HBA1-203ENST00000472694 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
HBA1-203ENST00000472694 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
HBA1-203ENST00000472694 ERCC6Q03468 1493 aa33.21■■■□□ 2.91
HBA1-203ENST00000472694 NESP48681 1621 aa33.08■■■□□ 2.89
HBA1-203ENST00000472694 WIZO95785 1651 aa33.06■■■□□ 2.88
HBA1-203ENST00000472694 LAMC3Q9Y6N6 1575 aa32.96■■■□□ 2.87
HBA1-203ENST00000472694 CUX2O14529 1486 aa32.96■■■□□ 2.87
HBA1-203ENST00000472694 RSF1Q96T23 1441 aaPredicted RBP32.93■■■□□ 2.86
HBA1-203ENST00000472694 PDS5BQ9NTI5 1447 aa32.81■■■□□ 2.84
HBA1-203ENST00000472694 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
HBA1-203ENST00000472694 TOP2AP11388 1531 aaKnown RBP32.71■■■□□ 2.83
HBA1-203ENST00000472694 KIF21AQ7Z4S6 1674 aa32.65■■■□□ 2.82
HBA1-203ENST00000472694 THOC2Q8NI27 1593 aaKnown RBP32.64■■■□□ 2.82
HBA1-203ENST00000472694 CFTRP13569 1480 aa32.48■■■□□ 2.79
HBA1-203ENST00000472694 DNAJC5Q9H3Z4 198 aa32.47■■■□□ 2.79
HBA1-203ENST00000472694 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
HBA1-203ENST00000472694 CEP164Q9UPV0 1460 aa32.43■■■□□ 2.78
HBA1-203ENST00000472694 FANCD2Q9BXW9 1451 aa32.42■■■□□ 2.78
HBA1-203ENST00000472694 WDR62O43379 1518 aa32.33■■■□□ 2.77
HBA1-203ENST00000472694 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
HBA1-203ENST00000472694 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
HBA1-203ENST00000472694 URB2Q14146 1524 aaKnown RBP32.07■■■□□ 2.72
HBA1-203ENST00000472694 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
HBA1-203ENST00000472694 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
HBA1-203ENST00000472694 TOPBP1Q92547 1522 aa31.83■■■□□ 2.69
HBA1-203ENST00000472694 IFT140Q96RY7 1462 aa31.77■■■□□ 2.68
HBA1-203ENST00000472694 DNMBPQ6XZF7 1577 aa31.76■■■□□ 2.67
HBA1-203ENST00000472694 ZNF608Q9ULD9 1512 aaPredicted RBP31.61■■■□□ 2.65
HBA1-203ENST00000472694 OSCARQ8IYS5 282 aa31.59■■■□□ 2.65
HBA1-203ENST00000472694 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
HBA1-203ENST00000472694 TARBP1Q13395 1621 aaKnown RBP31.47■■■□□ 2.63
HBA1-203ENST00000472694 EIF4G3O43432 1585 aaKnown RBP31.47■■■□□ 2.63
HBA1-203ENST00000472694 SOGA1O94964 1423 aa31.44■■■□□ 2.62
HBA1-203ENST00000472694 AQRO60306 1485 aaKnown RBP eCLIP31.41■■■□□ 2.62
HBA1-203ENST00000472694 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
HBA1-203ENST00000472694 CUX1P39880 1505 aa31.4■■■□□ 2.62
HBA1-203ENST00000472694 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
HBA1-203ENST00000472694 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
HBA1-203ENST00000472694 TRIM41Q8WV44 630 aa31.28■■■□□ 2.6
HBA1-203ENST00000472694 WDR97A6NE52 1622 aa31.24■■■□□ 2.59
HBA1-203ENST00000472694 FBLN2P98095 1184 aa31.22■■■□□ 2.59
HBA1-203ENST00000472694 CHD1O14646 1710 aa31.14■■■□□ 2.58
HBA1-203ENST00000472694 GRIN2BQ13224 1484 aa31.12■■■□□ 2.57
HBA1-203ENST00000472694 WRNQ14191 1432 aaPredicted RBP eCLIP31.11■■■□□ 2.57
HBA1-203ENST00000472694 SNAPC4Q5SXM2 1469 aa31.11■■■□□ 2.57
HBA1-203ENST00000472694 ABCA10Q8WWZ4 1543 aa31.07■■■□□ 2.56
HBA1-203ENST00000472694 MAGI1Q96QZ7 1491 aaPredicted RBP31.07■■■□□ 2.56
HBA1-203ENST00000472694 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
HBA1-203ENST00000472694 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
HBA1-203ENST00000472694 TOP2BQ02880 1626 aa31.03■■■□□ 2.56
HBA1-203ENST00000472694 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
HBA1-203ENST00000472694 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
HBA1-203ENST00000472694 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
HBA1-203ENST00000472694 BIVM-ERCC5R4GMW8 1640 aa31.01■■■□□ 2.55
HBA1-203ENST00000472694 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
HBA1-203ENST00000472694 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
HBA1-203ENST00000472694 PBRM1Q86U86 1689 aa30.96■■■□□ 2.55
HBA1-203ENST00000472694 SYNJ2O15056 1496 aa30.95■■■□□ 2.55
HBA1-203ENST00000472694 ABCA5Q8WWZ7 1642 aa30.95■■■□□ 2.54
HBA1-203ENST00000472694 CYB5RLQ6IPT4 315 aa30.8■■■□□ 2.52
HBA1-203ENST00000472694 CLASP1Q7Z460 1538 aa30.79■■■□□ 2.52
HBA1-203ENST00000472694 ERICH3Q5RHP9 1530 aa30.7■■■□□ 2.51
HBA1-203ENST00000472694 ADAMTS12P58397 1594 aa30.7■■■□□ 2.5
HBA1-203ENST00000472694 GRIN2AQ12879 1464 aa30.7■■■□□ 2.5
HBA1-203ENST00000472694 ARAP1Q96P48 1450 aa30.7■■■□□ 2.5
HBA1-203ENST00000472694 FHAD1B1AJZ9 1412 aa30.69■■■□□ 2.5
HBA1-203ENST00000472694 NUP160Q12769 1436 aa30.56■■■□□ 2.48
HBA1-203ENST00000472694 KIF27Q86VH2 1401 aa30.52■■■□□ 2.48
HBA1-203ENST00000472694 CEP170Q5SW79 1584 aa30.52■■■□□ 2.48
HBA1-203ENST00000472694 IGF1RP08069 1367 aa30.39■■■□□ 2.45
HBA1-203ENST00000472694 TRHP20396 242 aaPredicted RBP30.38■■■□□ 2.45
HBA1-203ENST00000472694 CUL7Q14999 1698 aa30.33■■■□□ 2.45
HBA1-203ENST00000472694 SHROOM2Q13796 1616 aa30.33■■■□□ 2.45
HBA1-203ENST00000472694 ERCC6L2Q5T890 1561 aa30.32■■■□□ 2.44
HBA1-203ENST00000472694 JPH4Q96JJ6 628 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms