RNA–Protein interactions for RNA: ENST00000320868.9

HBA1-201, Transcript of hemoglobin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HBA1, Length 577 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1-201ENST00000320868 NISCHQ9Y2I1 1504 aa47.19■■■■■ 5.14
HBA1-201ENST00000320868 CCDC180Q9P1Z9 1646 aa42.16■■■■■ 4.34
HBA1-201ENST00000320868 ABCC9O60706 1549 aa41.37■■■■■ 4.21
HBA1-201ENST00000320868 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.95
HBA1-201ENST00000320868 NACADO15069 1562 aa39.64■■■■□ 3.94
HBA1-201ENST00000320868 DCAF8L2P0C7V8 631 aa39.36■■■■□ 3.89
HBA1-201ENST00000320868 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
HBA1-201ENST00000320868 ZCCHC6Q5VYS8 1495 aaKnown RBP39.29■■■■□ 3.88
HBA1-201ENST00000320868 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
HBA1-201ENST00000320868 UNC13AQ9UPW8 1703 aa38.9■■■■□ 3.82
HBA1-201ENST00000320868 BICRAQ9NZM4 1560 aa38.56■■■■□ 3.76
HBA1-201ENST00000320868 PABPN1Q86U42 306 aaKnown RBP eCLIP38.54■■■■□ 3.76
HBA1-201ENST00000320868 SCRIBQ14160 1630 aa38.38■■■■□ 3.73
HBA1-201ENST00000320868 SHROOM4Q9ULL8 1493 aa38.19■■■■□ 3.7
HBA1-201ENST00000320868 DNAJC5BQ9UF47 199 aa38.14■■■■□ 3.7
HBA1-201ENST00000320868 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
HBA1-201ENST00000320868 CC2D2AQ9P2K1 1620 aa37.47■■■■□ 3.59
HBA1-201ENST00000320868 CECR2Q9BXF3 1484 aa37.22■■■■□ 3.55
HBA1-201ENST00000320868 SMARCA4P51532 1647 aa36.7■■■■□ 3.47
HBA1-201ENST00000320868 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
HBA1-201ENST00000320868 NCAPD3P42695 1498 aa36.55■■■■□ 3.44
HBA1-201ENST00000320868 ATAD2BQ9ULI0 1458 aa36.52■■■■□ 3.44
HBA1-201ENST00000320868 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
HBA1-201ENST00000320868 HMGXB3Q12766 1538 aa36.41■■■■□ 3.42
HBA1-201ENST00000320868 PEG3Q9GZU2 1588 aa36.37■■■■□ 3.41
HBA1-201ENST00000320868 MROH2BQ7Z745 1585 aa36.35■■■■□ 3.41
HBA1-201ENST00000320868 BAZ1BQ9UIG0 1483 aaKnown RBP36.22■■■■□ 3.39
HBA1-201ENST00000320868 WIZO95785 1651 aa35.96■■■■□ 3.35
HBA1-201ENST00000320868 RSF1Q96T23 1441 aaPredicted RBP35.82■■■■□ 3.32
HBA1-201ENST00000320868 NESP48681 1621 aa35.73■■■■□ 3.31
HBA1-201ENST00000320868 ERCC6Q03468 1493 aa35.7■■■■□ 3.31
HBA1-201ENST00000320868 LAMC3Q9Y6N6 1575 aa35.67■■■■□ 3.3
HBA1-201ENST00000320868 TOP2AP11388 1531 aaKnown RBP35.59■■■■□ 3.29
HBA1-201ENST00000320868 CUX2O14529 1486 aa35.46■■■■□ 3.27
HBA1-201ENST00000320868 CADPSQ9ULU8 1353 aa35.44■■■■□ 3.26
HBA1-201ENST00000320868 PDS5BQ9NTI5 1447 aa35.39■■■■□ 3.26
HBA1-201ENST00000320868 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
HBA1-201ENST00000320868 THOC2Q8NI27 1593 aaKnown RBP35.34■■■■□ 3.25
HBA1-201ENST00000320868 CFTRP13569 1480 aa35.22■■■■□ 3.23
HBA1-201ENST00000320868 CCDC88BA6NC98 1476 aa35.1■■■■□ 3.21
HBA1-201ENST00000320868 FANCD2Q9BXW9 1451 aa35.06■■■■□ 3.2
HBA1-201ENST00000320868 MRC2Q9UBG0 1479 aa35.06■■■■□ 3.2
HBA1-201ENST00000320868 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
HBA1-201ENST00000320868 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
HBA1-201ENST00000320868 WDR62O43379 1518 aa34.99■■■■□ 3.19
HBA1-201ENST00000320868 URB2Q14146 1524 aaKnown RBP34.74■■■■□ 3.15
HBA1-201ENST00000320868 SUPT5HO00267 1087 aaKnown RBP34.61■■■■□ 3.13
HBA1-201ENST00000320868 DNAJC5Q9H3Z4 198 aa34.58■■■■□ 3.13
HBA1-201ENST00000320868 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
HBA1-201ENST00000320868 ABCC8Q09428 1581 aa34.47■■■■□ 3.11
HBA1-201ENST00000320868 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.1
HBA1-201ENST00000320868 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
HBA1-201ENST00000320868 ZNF608Q9ULD9 1512 aaPredicted RBP34.18■■■■□ 3.06
HBA1-201ENST00000320868 POLA1P09884 1462 aaPredicted RBP34.17■■■■□ 3.06
HBA1-201ENST00000320868 TARBP1Q13395 1621 aaKnown RBP34.16■■■■□ 3.06
HBA1-201ENST00000320868 CUX1P39880 1505 aa34.13■■■■□ 3.05
HBA1-201ENST00000320868 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
HBA1-201ENST00000320868 FGD5Q6ZNL6 1462 aa34.05■■■■□ 3.04
HBA1-201ENST00000320868 RAD54L2Q9Y4B4 1467 aa33.99■■■■□ 3.03
HBA1-201ENST00000320868 SOGA1O94964 1423 aa33.97■■■■□ 3.03
HBA1-201ENST00000320868 AQRO60306 1485 aaKnown RBP eCLIP33.92■■■■□ 3.02
HBA1-201ENST00000320868 WDR97A6NE52 1622 aa33.92■■■■□ 3.02
HBA1-201ENST00000320868 OSCARQ8IYS5 282 aa33.84■■■■□ 3.01
HBA1-201ENST00000320868 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
HBA1-201ENST00000320868 TDRD9Q8NDG6 1382 aaKnown RBP33.8■■■■□ 3
HBA1-201ENST00000320868 WRNQ14191 1432 aaPredicted RBP eCLIP33.79■■■■□ 3
HBA1-201ENST00000320868 TOP2BQ02880 1626 aa33.79■■■■□ 3
HBA1-201ENST00000320868 SYNJ1O43426 1573 aa33.76■■■□□ 2.99
HBA1-201ENST00000320868 CHD1O14646 1710 aa33.73■■■□□ 2.99
HBA1-201ENST00000320868 ABCA10Q8WWZ4 1543 aa33.72■■■□□ 2.99
HBA1-201ENST00000320868 GRIN2BQ13224 1484 aa33.66■■■□□ 2.98
HBA1-201ENST00000320868 ABCA5Q8WWZ7 1642 aa33.65■■■□□ 2.98
HBA1-201ENST00000320868 SNAPC4Q5SXM2 1469 aa33.65■■■□□ 2.98
HBA1-201ENST00000320868 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
HBA1-201ENST00000320868 MAGI1Q96QZ7 1491 aaPredicted RBP33.63■■■□□ 2.97
HBA1-201ENST00000320868 GAPVD1Q14C86 1478 aa33.62■■■□□ 2.97
HBA1-201ENST00000320868 FBLN2P98095 1184 aa33.5■■■□□ 2.95
HBA1-201ENST00000320868 SYNJ2O15056 1496 aa33.48■■■□□ 2.95
HBA1-201ENST00000320868 RIMBP3CA6NJZ7 1639 aa33.42■■■□□ 2.94
HBA1-201ENST00000320868 RIMBP3BA6NNM3 1639 aa33.42■■■□□ 2.94
HBA1-201ENST00000320868 RIMBP3Q9UFD9 1639 aa33.42■■■□□ 2.94
HBA1-201ENST00000320868 CHMP7Q8WUX9 453 aaPredicted RBP33.4■■■□□ 2.94
HBA1-201ENST00000320868 ARHGEF11O15085 1522 aa33.38■■■□□ 2.93
HBA1-201ENST00000320868 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
HBA1-201ENST00000320868 CLASP1Q7Z460 1538 aa33.34■■■□□ 2.93
HBA1-201ENST00000320868 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
HBA1-201ENST00000320868 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
HBA1-201ENST00000320868 GRIN2AQ12879 1464 aa33.23■■■□□ 2.91
HBA1-201ENST00000320868 FHAD1B1AJZ9 1412 aa33.22■■■□□ 2.91
HBA1-201ENST00000320868 NUP160Q12769 1436 aa33.11■■■□□ 2.89
HBA1-201ENST00000320868 KIF27Q86VH2 1401 aa33.1■■■□□ 2.89
HBA1-201ENST00000320868 CEP170Q5SW79 1584 aa33.09■■■□□ 2.89
HBA1-201ENST00000320868 ARAP1Q96P48 1450 aa33.09■■■□□ 2.89
HBA1-201ENST00000320868 CUL7Q14999 1698 aa33.01■■■□□ 2.87
HBA1-201ENST00000320868 CYB5RLQ6IPT4 315 aa32.97■■■□□ 2.87
HBA1-201ENST00000320868 IGF1RP08069 1367 aa32.96■■■□□ 2.87
HBA1-201ENST00000320868 SHROOM2Q13796 1616 aa32.92■■■□□ 2.86
HBA1-201ENST00000320868 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
HBA1-201ENST00000320868 ERCC6L2Q5T890 1561 aa32.82■■■□□ 2.84
HBA1-201ENST00000320868 CARMIL1Q5VZK9 1371 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms