RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 NISCHQ9Y2I1 1504 aa35.06■■■■□ 3.2
SLC6A8-209ENST00000476466 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
SLC6A8-209ENST00000476466 ABCC9O60706 1549 aa30.91■■■□□ 2.54
SLC6A8-209ENST00000476466 RB1CC1Q8TDY2 1594 aa29.52■■■□□ 2.32
SLC6A8-209ENST00000476466 NACADO15069 1562 aa29.43■■■□□ 2.3
SLC6A8-209ENST00000476466 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
SLC6A8-209ENST00000476466 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
SLC6A8-209ENST00000476466 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
SLC6A8-209ENST00000476466 UNC13AQ9UPW8 1703 aa28.98■■■□□ 2.23
SLC6A8-209ENST00000476466 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
SLC6A8-209ENST00000476466 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
SLC6A8-209ENST00000476466 BICRAQ9NZM4 1560 aa28.79■■■□□ 2.2
SLC6A8-209ENST00000476466 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
SLC6A8-209ENST00000476466 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
SLC6A8-209ENST00000476466 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
SLC6A8-209ENST00000476466 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
SLC6A8-209ENST00000476466 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
SLC6A8-209ENST00000476466 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
SLC6A8-209ENST00000476466 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
SLC6A8-209ENST00000476466 ATAD2BQ9ULI0 1458 aa27.2■■□□□ 1.95
SLC6A8-209ENST00000476466 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
SLC6A8-209ENST00000476466 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.94
SLC6A8-209ENST00000476466 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
SLC6A8-209ENST00000476466 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
SLC6A8-209ENST00000476466 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
SLC6A8-209ENST00000476466 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.91
SLC6A8-209ENST00000476466 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
SLC6A8-209ENST00000476466 WIZO95785 1651 aa26.76■■□□□ 1.87
SLC6A8-209ENST00000476466 NESP48681 1621 aa26.72■■□□□ 1.87
SLC6A8-209ENST00000476466 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
SLC6A8-209ENST00000476466 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
SLC6A8-209ENST00000476466 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
SLC6A8-209ENST00000476466 TOP2AP11388 1531 aaKnown RBP26.42■■□□□ 1.82
SLC6A8-209ENST00000476466 CUX2O14529 1486 aa26.41■■□□□ 1.82
SLC6A8-209ENST00000476466 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
SLC6A8-209ENST00000476466 KIF21AQ7Z4S6 1674 aa26.37■■□□□ 1.81
SLC6A8-209ENST00000476466 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
SLC6A8-209ENST00000476466 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
SLC6A8-209ENST00000476466 CFTRP13569 1480 aa26.18■■□□□ 1.78
SLC6A8-209ENST00000476466 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
SLC6A8-209ENST00000476466 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
SLC6A8-209ENST00000476466 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
SLC6A8-209ENST00000476466 CEP164Q9UPV0 1460 aa26.06■■□□□ 1.76
SLC6A8-209ENST00000476466 WDR62O43379 1518 aa26.06■■□□□ 1.76
SLC6A8-209ENST00000476466 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
SLC6A8-209ENST00000476466 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
SLC6A8-209ENST00000476466 DNAJC5Q9H3Z4 198 aa25.9■■□□□ 1.74
SLC6A8-209ENST00000476466 SUPT5HO00267 1087 aaKnown RBP25.67■■□□□ 1.7
SLC6A8-209ENST00000476466 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
SLC6A8-209ENST00000476466 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
SLC6A8-209ENST00000476466 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
SLC6A8-209ENST00000476466 IFT140Q96RY7 1462 aa25.51■■□□□ 1.67
SLC6A8-209ENST00000476466 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
SLC6A8-209ENST00000476466 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.66
SLC6A8-209ENST00000476466 TARBP1Q13395 1621 aaKnown RBP25.44■■□□□ 1.66
SLC6A8-209ENST00000476466 CUX1P39880 1505 aa25.42■■□□□ 1.66
SLC6A8-209ENST00000476466 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
SLC6A8-209ENST00000476466 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
SLC6A8-209ENST00000476466 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
SLC6A8-209ENST00000476466 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.642e-15■■□□□ 14.3
SLC6A8-209ENST00000476466 SOGA1O94964 1423 aa25.26■■□□□ 1.63
SLC6A8-209ENST00000476466 TDRD9Q8NDG6 1382 aaKnown RBP25.19■■□□□ 1.62
SLC6A8-209ENST00000476466 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
SLC6A8-209ENST00000476466 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
SLC6A8-209ENST00000476466 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
SLC6A8-209ENST00000476466 CHD1O14646 1710 aa25.12■■□□□ 1.61
SLC6A8-209ENST00000476466 SNAPC4Q5SXM2 1469 aa25.08■■□□□ 1.6
SLC6A8-209ENST00000476466 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.6
SLC6A8-209ENST00000476466 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
SLC6A8-209ENST00000476466 TOP2BQ02880 1626 aa25.06■■□□□ 1.6
SLC6A8-209ENST00000476466 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
SLC6A8-209ENST00000476466 ABCA5Q8WWZ7 1642 aa25.03■■□□□ 1.6
SLC6A8-209ENST00000476466 GRIN2BQ13224 1484 aa25■■□□□ 1.59
SLC6A8-209ENST00000476466 PBRM1Q86U86 1689 aa24.99■■□□□ 1.59
SLC6A8-209ENST00000476466 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
SLC6A8-209ENST00000476466 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
SLC6A8-209ENST00000476466 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
SLC6A8-209ENST00000476466 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
SLC6A8-209ENST00000476466 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
SLC6A8-209ENST00000476466 FBLN2P98095 1184 aa24.95■■□□□ 1.58
SLC6A8-209ENST00000476466 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
SLC6A8-209ENST00000476466 ARHGEF11O15085 1522 aa24.92■■□□□ 1.58
SLC6A8-209ENST00000476466 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
SLC6A8-209ENST00000476466 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
SLC6A8-209ENST00000476466 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
SLC6A8-209ENST00000476466 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
SLC6A8-209ENST00000476466 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
SLC6A8-209ENST00000476466 GRIN2AQ12879 1464 aa24.72■■□□□ 1.55
SLC6A8-209ENST00000476466 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
SLC6A8-209ENST00000476466 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
SLC6A8-209ENST00000476466 FHAD1B1AJZ9 1412 aa24.67■■□□□ 1.54
SLC6A8-209ENST00000476466 NUP160Q12769 1436 aa24.64■■□□□ 1.54
SLC6A8-209ENST00000476466 CYB5RLQ6IPT4 315 aa24.62■■□□□ 1.53
SLC6A8-209ENST00000476466 ERCC6L2Q5T890 1561 aa24.56■■□□□ 1.52
SLC6A8-209ENST00000476466 IGF1RP08069 1367 aa24.52■■□□□ 1.52
SLC6A8-209ENST00000476466 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
SLC6A8-209ENST00000476466 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
SLC6A8-209ENST00000476466 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.51
SLC6A8-209ENST00000476466 CUL7Q14999 1698 aa24.43■■□□□ 1.5
SLC6A8-209ENST00000476466 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms