RNA–Protein interactions for RNA: ENST00000509677.5

SH3BP2-214, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-214ENST00000509677 NISCHQ9Y2I1 1504 aa43.8■■■■■ 4.6
SH3BP2-214ENST00000509677 CCDC180Q9P1Z9 1646 aa38.87■■■■□ 3.81
SH3BP2-214ENST00000509677 ABCC9O60706 1549 aa38.84■■■■□ 3.81
SH3BP2-214ENST00000509677 RB1CC1Q8TDY2 1594 aa36.94■■■■□ 3.5
SH3BP2-214ENST00000509677 DCAF8L2P0C7V8 631 aa36.73■■■■□ 3.47
SH3BP2-214ENST00000509677 NACADO15069 1562 aa36.62■■■■□ 3.45
SH3BP2-214ENST00000509677 ZCCHC6Q5VYS8 1495 aaKnown RBP36.51■■■■□ 3.44
SH3BP2-214ENST00000509677 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.44
SH3BP2-214ENST00000509677 UNC13AQ9UPW8 1703 aa36.39■■■■□ 3.42
SH3BP2-214ENST00000509677 MYO15BQ96JP2 1530 aa36.27■■■■□ 3.4
SH3BP2-214ENST00000509677 DCAF1Q9Y4B6 1507 aa36.19■■■■□ 3.38
SH3BP2-214ENST00000509677 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
SH3BP2-214ENST00000509677 BICRAQ9NZM4 1560 aa35.9■■■■□ 3.34
SH3BP2-214ENST00000509677 SCRIBQ14160 1630 aa35.51■■■■□ 3.28
SH3BP2-214ENST00000509677 SHROOM4Q9ULL8 1493 aa35.3■■■■□ 3.24
SH3BP2-214ENST00000509677 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
SH3BP2-214ENST00000509677 EIF4G1Q04637 1599 aaKnown RBP35.02■■■■□ 3.2
SH3BP2-214ENST00000509677 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
SH3BP2-214ENST00000509677 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
SH3BP2-214ENST00000509677 BAZ1AQ9NRL2 1556 aaPredicted RBP33.92■■■■□ 3.02
SH3BP2-214ENST00000509677 MROH2BQ7Z745 1585 aa33.79■■■■□ 3
SH3BP2-214ENST00000509677 ATAD2BQ9ULI0 1458 aa33.76■■■□□ 2.99
SH3BP2-214ENST00000509677 NCAPD3P42695 1498 aa33.71■■■□□ 2.99
SH3BP2-214ENST00000509677 SMARCA2P51531 1590 aa33.68■■■□□ 2.98
SH3BP2-214ENST00000509677 DNAJC5Q9H3Z4 198 aa33.65■■■□□ 2.98
SH3BP2-214ENST00000509677 HMGXB3Q12766 1538 aa33.58■■■□□ 2.97
SH3BP2-214ENST00000509677 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
SH3BP2-214ENST00000509677 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
SH3BP2-214ENST00000509677 BAZ1BQ9UIG0 1483 aaKnown RBP33.5■■■□□ 2.95
SH3BP2-214ENST00000509677 RSF1Q96T23 1441 aaPredicted RBP33.47■■■□□ 2.95
SH3BP2-214ENST00000509677 CUX2O14529 1486 aa33.46■■■□□ 2.95
SH3BP2-214ENST00000509677 WIZO95785 1651 aa33.39■■■□□ 2.94
SH3BP2-214ENST00000509677 NESP48681 1621 aa33.35■■■□□ 2.93
SH3BP2-214ENST00000509677 THOC2Q8NI27 1593 aaKnown RBP33.13■■■□□ 2.89
SH3BP2-214ENST00000509677 KIF21AQ7Z4S6 1674 aa33.11■■■□□ 2.89
SH3BP2-214ENST00000509677 LAMC3Q9Y6N6 1575 aa33.1■■■□□ 2.89
SH3BP2-214ENST00000509677 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
SH3BP2-214ENST00000509677 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
SH3BP2-214ENST00000509677 PDS5BQ9NTI5 1447 aa32.78■■■□□ 2.84
SH3BP2-214ENST00000509677 CADPSQ9ULU8 1353 aa32.76■■■□□ 2.83
SH3BP2-214ENST00000509677 CCDC88BA6NC98 1476 aa32.71■■■□□ 2.83
SH3BP2-214ENST00000509677 MRC2Q9UBG0 1479 aa32.61■■■□□ 2.81
SH3BP2-214ENST00000509677 WDR62O43379 1518 aa32.57■■■□□ 2.8
SH3BP2-214ENST00000509677 CFTRP13569 1480 aa32.56■■■□□ 2.8
SH3BP2-214ENST00000509677 CEP164Q9UPV0 1460 aa32.47■■■□□ 2.79
SH3BP2-214ENST00000509677 FANCD2Q9BXW9 1451 aa32.4■■■□□ 2.78
SH3BP2-214ENST00000509677 PRDM2Q13029 1718 aa32.37■■■□□ 2.77
SH3BP2-214ENST00000509677 TRIM41Q8WV44 630 aa32.22■■■□□ 2.75
SH3BP2-214ENST00000509677 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
SH3BP2-214ENST00000509677 OSCARQ8IYS5 282 aa31.92■■■□□ 2.7
SH3BP2-214ENST00000509677 TOPBP1Q92547 1522 aa31.86■■■□□ 2.69
SH3BP2-214ENST00000509677 ABCC8Q09428 1581 aa31.84■■■□□ 2.69
SH3BP2-214ENST00000509677 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
SH3BP2-214ENST00000509677 ZNF608Q9ULD9 1512 aaPredicted RBP31.79■■■□□ 2.68
SH3BP2-214ENST00000509677 IFT140Q96RY7 1462 aa31.78■■■□□ 2.68
SH3BP2-214ENST00000509677 EIF4G3O43432 1585 aaKnown RBP31.73■■■□□ 2.67
SH3BP2-214ENST00000509677 CUX1P39880 1505 aa31.69■■■□□ 2.66
SH3BP2-214ENST00000509677 RIMBP3CA6NJZ7 1639 aa31.66■■■□□ 2.66
SH3BP2-214ENST00000509677 RIMBP3BA6NNM3 1639 aa31.66■■■□□ 2.66
SH3BP2-214ENST00000509677 RIMBP3Q9UFD9 1639 aa31.66■■■□□ 2.66
SH3BP2-214ENST00000509677 CHD1O14646 1710 aa31.62■■■□□ 2.65
SH3BP2-214ENST00000509677 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
SH3BP2-214ENST00000509677 TARBP1Q13395 1621 aaKnown RBP31.59■■■□□ 2.65
SH3BP2-214ENST00000509677 WRNQ14191 1432 aaPredicted RBP eCLIP31.57■■■□□ 2.64
SH3BP2-214ENST00000509677 FGD5Q6ZNL6 1462 aa31.56■■■□□ 2.64
SH3BP2-214ENST00000509677 SOGA1O94964 1423 aa31.52■■■□□ 2.64
SH3BP2-214ENST00000509677 RAD54L2Q9Y4B4 1467 aa31.51■■■□□ 2.63
SH3BP2-214ENST00000509677 ARHGEF11O15085 1522 aa31.46■■■□□ 2.63
SH3BP2-214ENST00000509677 SYNJ1O43426 1573 aa31.43■■■□□ 2.62
SH3BP2-214ENST00000509677 AQRO60306 1485 aaKnown RBP eCLIP31.43■■■□□ 2.62
SH3BP2-214ENST00000509677 TOP2BQ02880 1626 aa31.4■■■□□ 2.62
SH3BP2-214ENST00000509677 BIVM-ERCC5R4GMW8 1640 aa31.36■■■□□ 2.61
SH3BP2-214ENST00000509677 TDRD9Q8NDG6 1382 aaKnown RBP31.35■■■□□ 2.61
SH3BP2-214ENST00000509677 FBLN2P98095 1184 aa31.29■■■□□ 2.6
SH3BP2-214ENST00000509677 ABCA10Q8WWZ4 1543 aa31.24■■■□□ 2.59
SH3BP2-214ENST00000509677 CYB5RLQ6IPT4 315 aa31.23■■■□□ 2.59
SH3BP2-214ENST00000509677 WDR97A6NE52 1622 aa31.23■■■□□ 2.59
SH3BP2-214ENST00000509677 SNAPC4Q5SXM2 1469 aa31.18■■■□□ 2.58
SH3BP2-214ENST00000509677 PBRM1Q86U86 1689 aa31.16■■■□□ 2.58
SH3BP2-214ENST00000509677 ARAP1Q96P48 1450 aa31.14■■■□□ 2.58
SH3BP2-214ENST00000509677 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.57
SH3BP2-214ENST00000509677 GRIN2BQ13224 1484 aa31.1■■■□□ 2.57
SH3BP2-214ENST00000509677 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
SH3BP2-214ENST00000509677 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
SH3BP2-214ENST00000509677 MAGI1Q96QZ7 1491 aaPredicted RBP31.05■■■□□ 2.56
SH3BP2-214ENST00000509677 TRHP20396 242 aaPredicted RBP31■■■□□ 2.55
SH3BP2-214ENST00000509677 CHMP7Q8WUX9 453 aaPredicted RBP30.98■■■□□ 2.55
SH3BP2-214ENST00000509677 SYNJ2O15056 1496 aa30.94■■■□□ 2.54
SH3BP2-214ENST00000509677 KIF27Q86VH2 1401 aa30.9■■■□□ 2.54
SH3BP2-214ENST00000509677 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
SH3BP2-214ENST00000509677 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
SH3BP2-214ENST00000509677 ADAMTS12P58397 1594 aa30.77■■■□□ 2.52
SH3BP2-214ENST00000509677 IGF1RP08069 1367 aa30.77■■■□□ 2.52
SH3BP2-214ENST00000509677 CHIC1Q5VXU3 224 aa30.71■■■□□ 2.51
SH3BP2-214ENST00000509677 GRIN2AQ12879 1464 aa30.7■■■□□ 2.5
SH3BP2-214ENST00000509677 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
SH3BP2-214ENST00000509677 CEP170Q5SW79 1584 aa30.63■■■□□ 2.49
SH3BP2-214ENST00000509677 ERCC6L2Q5T890 1561 aa30.62■■■□□ 2.49
SH3BP2-214ENST00000509677 CARMIL1Q5VZK9 1371 aa30.6■■■□□ 2.49
SH3BP2-214ENST00000509677 CUL7Q14999 1698 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms