RNA–Protein interactions for RNA: ENST00000509022.5

FAM200B-214, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 1 (best)

Gene FAM200B, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-214ENST00000509022 NISCHQ9Y2I1 1504 aa49.74■■■■■ 5.55
FAM200B-214ENST00000509022 CCDC180Q9P1Z9 1646 aa44.3■■■■■ 4.68
FAM200B-214ENST00000509022 ABCC9O60706 1549 aa43.16■■■■■ 4.5
FAM200B-214ENST00000509022 RB1CC1Q8TDY2 1594 aa41.6■■■■■ 4.25
FAM200B-214ENST00000509022 NACADO15069 1562 aa41.55■■■■■ 4.24
FAM200B-214ENST00000509022 ZCCHC6Q5VYS8 1495 aaKnown RBP41.47■■■■■ 4.23
FAM200B-214ENST00000509022 DCAF8L2P0C7V8 631 aa41.4■■■■■ 4.22
FAM200B-214ENST00000509022 MYO15BQ96JP2 1530 aa41.31■■■■■ 4.2
FAM200B-214ENST00000509022 DCAF1Q9Y4B6 1507 aa41.17■■■■■ 4.18
FAM200B-214ENST00000509022 UNC13AQ9UPW8 1703 aa40.78■■■■■ 4.12
FAM200B-214ENST00000509022 SCRIBQ14160 1630 aa40.38■■■■■ 4.06
FAM200B-214ENST00000509022 BICRAQ9NZM4 1560 aa40.35■■■■■ 4.05
FAM200B-214ENST00000509022 PABPN1Q86U42 306 aaKnown RBP eCLIP40.26■■■■■ 4.04
FAM200B-214ENST00000509022 SHROOM4Q9ULL8 1493 aa39.91■■■■□ 3.98
FAM200B-214ENST00000509022 DNAJC5BQ9UF47 199 aa39.45■■■■□ 3.91
FAM200B-214ENST00000509022 EIF4G1Q04637 1599 aaKnown RBP39.26■■■■□ 3.88
FAM200B-214ENST00000509022 CC2D2AQ9P2K1 1620 aa39.09■■■■□ 3.85
FAM200B-214ENST00000509022 CECR2Q9BXF3 1484 aa38.77■■■■□ 3.8
FAM200B-214ENST00000509022 SMARCA4P51532 1647 aa38.63■■■■□ 3.78
FAM200B-214ENST00000509022 BAZ1AQ9NRL2 1556 aaPredicted RBP38.57■■■■□ 3.76
FAM200B-214ENST00000509022 MROH2BQ7Z745 1585 aa38.34■■■■□ 3.73
FAM200B-214ENST00000509022 SMARCA2P51531 1590 aa38.33■■■■□ 3.73
FAM200B-214ENST00000509022 ATAD2BQ9ULI0 1458 aa38.33■■■■□ 3.73
FAM200B-214ENST00000509022 NCAPD3P42695 1498 aa38.28■■■■□ 3.72
FAM200B-214ENST00000509022 PEG3Q9GZU2 1588 aa38.24■■■■□ 3.71
FAM200B-214ENST00000509022 HMGXB3Q12766 1538 aa38.18■■■■□ 3.7
FAM200B-214ENST00000509022 BAZ1BQ9UIG0 1483 aaKnown RBP38.04■■■■□ 3.68
FAM200B-214ENST00000509022 WIZO95785 1651 aa37.98■■■■□ 3.67
FAM200B-214ENST00000509022 RSF1Q96T23 1441 aaPredicted RBP37.88■■■■□ 3.66
FAM200B-214ENST00000509022 TOP2AP11388 1531 aaKnown RBP37.57■■■■□ 3.61
FAM200B-214ENST00000509022 NESP48681 1621 aa37.38■■■■□ 3.57
FAM200B-214ENST00000509022 LAMC3Q9Y6N6 1575 aa37.34■■■■□ 3.57
FAM200B-214ENST00000509022 ERCC6Q03468 1493 aa37.2■■■■□ 3.55
FAM200B-214ENST00000509022 CADPSQ9ULU8 1353 aa37.15■■■■□ 3.54
FAM200B-214ENST00000509022 CCDC88BA6NC98 1476 aa37.06■■■■□ 3.52
FAM200B-214ENST00000509022 KIF21AQ7Z4S6 1674 aa37.05■■■■□ 3.52
FAM200B-214ENST00000509022 PDS5BQ9NTI5 1447 aa37■■■■□ 3.51
FAM200B-214ENST00000509022 CFTRP13569 1480 aa36.98■■■■□ 3.51
FAM200B-214ENST00000509022 SUPT5HO00267 1087 aaKnown RBP36.92■■■■□ 3.5
FAM200B-214ENST00000509022 PRDM2Q13029 1718 aa36.91■■■■□ 3.5
FAM200B-214ENST00000509022 THOC2Q8NI27 1593 aaKnown RBP36.88■■■■□ 3.49
FAM200B-214ENST00000509022 CUX2O14529 1486 aa36.79■■■■□ 3.48
FAM200B-214ENST00000509022 FANCD2Q9BXW9 1451 aa36.77■■■■□ 3.48
FAM200B-214ENST00000509022 CEP164Q9UPV0 1460 aa36.75■■■■□ 3.47
FAM200B-214ENST00000509022 MRC2Q9UBG0 1479 aa36.67■■■■□ 3.46
FAM200B-214ENST00000509022 WDR62O43379 1518 aa36.58■■■■□ 3.45
FAM200B-214ENST00000509022 URB2Q14146 1524 aaKnown RBP36.42■■■■□ 3.42
FAM200B-214ENST00000509022 DNMBPQ6XZF7 1577 aa36.21■■■■□ 3.39
FAM200B-214ENST00000509022 TOPBP1Q92547 1522 aa36.21■■■■□ 3.39
FAM200B-214ENST00000509022 ABCC8Q09428 1581 aa36.19■■■■□ 3.38
FAM200B-214ENST00000509022 CUX1P39880 1505 aa35.98■■■■□ 3.35
FAM200B-214ENST00000509022 IFT140Q96RY7 1462 aa35.95■■■■□ 3.35
FAM200B-214ENST00000509022 POLA1P09884 1462 aaPredicted RBP35.91■■■■□ 3.34
FAM200B-214ENST00000509022 TARBP1Q13395 1621 aaKnown RBP35.85■■■■□ 3.33
FAM200B-214ENST00000509022 FGD5Q6ZNL6 1462 aa35.84■■■■□ 3.33
FAM200B-214ENST00000509022 ZNF608Q9ULD9 1512 aaPredicted RBP35.78■■■■□ 3.32
FAM200B-214ENST00000509022 BIVM-ERCC5R4GMW8 1640 aa35.75■■■■□ 3.31
FAM200B-214ENST00000509022 WRNQ14191 1432 aaPredicted RBP eCLIP35.74■■■■□ 3.31
FAM200B-214ENST00000509022 EIF4G3O43432 1585 aaKnown RBP35.73■■■■□ 3.31
FAM200B-214ENST00000509022 RAD54L2Q9Y4B4 1467 aa35.73■■■■□ 3.31
FAM200B-214ENST00000509022 SYNJ1O43426 1573 aa35.72■■■■□ 3.31
FAM200B-214ENST00000509022 TOP2BQ02880 1626 aa35.71■■■■□ 3.31
FAM200B-214ENST00000509022 SOGA1O94964 1423 aa35.7■■■■□ 3.31
FAM200B-214ENST00000509022 WDR97A6NE52 1622 aa35.65■■■■□ 3.3
FAM200B-214ENST00000509022 AQRO60306 1485 aaKnown RBP eCLIP35.55■■■■□ 3.28
FAM200B-214ENST00000509022 ABCA10Q8WWZ4 1543 aa35.48■■■■□ 3.27
FAM200B-214ENST00000509022 TDRD9Q8NDG6 1382 aaKnown RBP35.48■■■■□ 3.27
FAM200B-214ENST00000509022 DNAJC5Q9H3Z4 198 aa35.47■■■■□ 3.27
FAM200B-214ENST00000509022 ABCA5Q8WWZ7 1642 aa35.4■■■■□ 3.26
FAM200B-214ENST00000509022 PBRM1Q86U86 1689 aa35.4■■■■□ 3.26
FAM200B-214ENST00000509022 GAPVD1Q14C86 1478 aa35.33■■■■□ 3.25
FAM200B-214ENST00000509022 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
FAM200B-214ENST00000509022 CHD1O14646 1710 aa35.31■■■■□ 3.24
FAM200B-214ENST00000509022 SNAPC4Q5SXM2 1469 aa35.29■■■■□ 3.24
FAM200B-214ENST00000509022 MAGI1Q96QZ7 1491 aaPredicted RBP35.23■■■■□ 3.23
FAM200B-214ENST00000509022 OSCARQ8IYS5 282 aa35.17■■■■□ 3.22
FAM200B-214ENST00000509022 SYNJ2O15056 1496 aa35.09■■■■□ 3.21
FAM200B-214ENST00000509022 ERICH3Q5RHP9 1530 aa35.07■■■■□ 3.21
FAM200B-214ENST00000509022 FBLN2P98095 1184 aa35.07■■■■□ 3.2
FAM200B-214ENST00000509022 ADAMTS12P58397 1594 aa35.06■■■■□ 3.2
FAM200B-214ENST00000509022 CHMP7Q8WUX9 453 aaPredicted RBP34.99■■■■□ 3.19
FAM200B-214ENST00000509022 KIF27Q86VH2 1401 aa34.98■■■■□ 3.19
FAM200B-214ENST00000509022 FHAD1B1AJZ9 1412 aa34.91■■■■□ 3.18
FAM200B-214ENST00000509022 GRIN2AQ12879 1464 aa34.89■■■■□ 3.18
FAM200B-214ENST00000509022 TRIM41Q8WV44 630 aa34.86■■■■□ 3.17
FAM200B-214ENST00000509022 CLASP1Q7Z460 1538 aa34.86■■■■□ 3.17
FAM200B-214ENST00000509022 CUL7Q14999 1698 aa34.83■■■■□ 3.17
FAM200B-214ENST00000509022 IGF1RP08069 1367 aa34.76■■■■□ 3.16
FAM200B-214ENST00000509022 RIMBP3CA6NJZ7 1639 aa34.76■■■■□ 3.15
FAM200B-214ENST00000509022 RIMBP3BA6NNM3 1639 aa34.76■■■■□ 3.15
FAM200B-214ENST00000509022 RIMBP3Q9UFD9 1639 aa34.76■■■■□ 3.15
FAM200B-214ENST00000509022 CEP170Q5SW79 1584 aa34.74■■■■□ 3.15
FAM200B-214ENST00000509022 ARHGEF11O15085 1522 aa34.72■■■■□ 3.15
FAM200B-214ENST00000509022 NUP160Q12769 1436 aa34.71■■■■□ 3.15
FAM200B-214ENST00000509022 RUSC2Q8N2Y8 1516 aa34.68■■■■□ 3.14
FAM200B-214ENST00000509022 CARMIL1Q5VZK9 1371 aa34.59■■■■□ 3.13
FAM200B-214ENST00000509022 SHROOM2Q13796 1616 aa34.51■■■■□ 3.11
FAM200B-214ENST00000509022 CHIC1Q5VXU3 224 aa34.49■■■■□ 3.11
FAM200B-214ENST00000509022 ARAP1Q96P48 1450 aa34.44■■■■□ 3.1
FAM200B-214ENST00000509022 RAPGEF2Q9Y4G8 1499 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms