RNA–Protein interactions for RNA: ENST00000503617.1

FAM200B-205, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 2

Gene FAM200B, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-205ENST00000503617 NISCHQ9Y2I1 1504 aa55.26■■■■■ 6.44
FAM200B-205ENST00000503617 CCDC180Q9P1Z9 1646 aa49.31■■■■■ 5.48
FAM200B-205ENST00000503617 ABCC9O60706 1549 aa48.6■■■■■ 5.37
FAM200B-205ENST00000503617 RB1CC1Q8TDY2 1594 aa46.56■■■■■ 5.04
FAM200B-205ENST00000503617 NACADO15069 1562 aa46.43■■■■■ 5.02
FAM200B-205ENST00000503617 DCAF8L2P0C7V8 631 aa46.31■■■■■ 5
FAM200B-205ENST00000503617 MYO15BQ96JP2 1530 aa46.02■■■■■ 4.96
FAM200B-205ENST00000503617 ZCCHC6Q5VYS8 1495 aaKnown RBP45.93■■■■■ 4.94
FAM200B-205ENST00000503617 DCAF1Q9Y4B6 1507 aa45.68■■■■■ 4.9
FAM200B-205ENST00000503617 UNC13AQ9UPW8 1703 aa45.63■■■■■ 4.9
FAM200B-205ENST00000503617 PABPN1Q86U42 306 aaKnown RBP eCLIP45.35■■■■■ 4.85
FAM200B-205ENST00000503617 BICRAQ9NZM4 1560 aa45.23■■■■■ 4.83
FAM200B-205ENST00000503617 DNAJC5BQ9UF47 199 aa45.01■■■■■ 4.8
FAM200B-205ENST00000503617 SCRIBQ14160 1630 aa44.95■■■■■ 4.79
FAM200B-205ENST00000503617 SHROOM4Q9ULL8 1493 aa44.62■■■■■ 4.73
FAM200B-205ENST00000503617 EIF4G1Q04637 1599 aaKnown RBP44.03■■■■■ 4.64
FAM200B-205ENST00000503617 CC2D2AQ9P2K1 1620 aa43.97■■■■■ 4.63
FAM200B-205ENST00000503617 CECR2Q9BXF3 1484 aa43.69■■■■■ 4.58
FAM200B-205ENST00000503617 SMARCA4P51532 1647 aa42.97■■■■■ 4.47
FAM200B-205ENST00000503617 NCAPD3P42695 1498 aa42.85■■■■■ 4.45
FAM200B-205ENST00000503617 BAZ1AQ9NRL2 1556 aaPredicted RBP42.83■■■■■ 4.45
FAM200B-205ENST00000503617 ATAD2BQ9ULI0 1458 aa42.82■■■■■ 4.45
FAM200B-205ENST00000503617 SMARCA2P51531 1590 aa42.73■■■■■ 4.43
FAM200B-205ENST00000503617 MROH2BQ7Z745 1585 aa42.6■■■■■ 4.41
FAM200B-205ENST00000503617 HMGXB3Q12766 1538 aa42.59■■■■■ 4.41
FAM200B-205ENST00000503617 PEG3Q9GZU2 1588 aa42.55■■■■■ 4.4
FAM200B-205ENST00000503617 BAZ1BQ9UIG0 1483 aaKnown RBP42.43■■■■■ 4.38
FAM200B-205ENST00000503617 WIZO95785 1651 aa42.15■■■■■ 4.34
FAM200B-205ENST00000503617 NESP48681 1621 aa41.96■■■■■ 4.31
FAM200B-205ENST00000503617 RSF1Q96T23 1441 aaPredicted RBP41.95■■■■■ 4.31
FAM200B-205ENST00000503617 ERCC6Q03468 1493 aa41.87■■■■■ 4.29
FAM200B-205ENST00000503617 LAMC3Q9Y6N6 1575 aa41.78■■■■■ 4.28
FAM200B-205ENST00000503617 TOP2AP11388 1531 aaKnown RBP41.62■■■■■ 4.25
FAM200B-205ENST00000503617 CUX2O14529 1486 aa41.58■■■■■ 4.25
FAM200B-205ENST00000503617 CADPSQ9ULU8 1353 aa41.57■■■■■ 4.25
FAM200B-205ENST00000503617 KIF21AQ7Z4S6 1674 aa41.49■■■■■ 4.23
FAM200B-205ENST00000503617 PDS5BQ9NTI5 1447 aa41.48■■■■■ 4.23
FAM200B-205ENST00000503617 THOC2Q8NI27 1593 aaKnown RBP41.41■■■■■ 4.22
FAM200B-205ENST00000503617 CFTRP13569 1480 aa41.25■■■■■ 4.19
FAM200B-205ENST00000503617 CCDC88BA6NC98 1476 aa41.16■■■■■ 4.18
FAM200B-205ENST00000503617 FANCD2Q9BXW9 1451 aa41.09■■■■■ 4.17
FAM200B-205ENST00000503617 MRC2Q9UBG0 1479 aa41.09■■■■■ 4.17
FAM200B-205ENST00000503617 CEP164Q9UPV0 1460 aa41.07■■■■■ 4.16
FAM200B-205ENST00000503617 WDR62O43379 1518 aa40.98■■■■■ 4.15
FAM200B-205ENST00000503617 PRDM2Q13029 1718 aa40.98■■■■■ 4.15
FAM200B-205ENST00000503617 DNAJC5Q9H3Z4 198 aa40.79■■■■■ 4.12
FAM200B-205ENST00000503617 URB2Q14146 1524 aaKnown RBP40.73■■■■■ 4.11
FAM200B-205ENST00000503617 SUPT5HO00267 1087 aaKnown RBP40.6■■■■■ 4.09
FAM200B-205ENST00000503617 TOPBP1Q92547 1522 aa40.42■■■■■ 4.06
FAM200B-205ENST00000503617 ABCC8Q09428 1581 aa40.36■■■■■ 4.05
FAM200B-205ENST00000503617 DNMBPQ6XZF7 1577 aa40.32■■■■■ 4.05
FAM200B-205ENST00000503617 IFT140Q96RY7 1462 aa40.21■■■■■ 4.03
FAM200B-205ENST00000503617 ZNF608Q9ULD9 1512 aaPredicted RBP40.11■■■■■ 4.01
FAM200B-205ENST00000503617 POLA1P09884 1462 aaPredicted RBP40.03■■■■■ 4
FAM200B-205ENST00000503617 TARBP1Q13395 1621 aaKnown RBP40.02■■■■■ 4
FAM200B-205ENST00000503617 CUX1P39880 1505 aa39.98■■■■□ 3.99
FAM200B-205ENST00000503617 EIF4G3O43432 1585 aaKnown RBP39.93■■■■□ 3.98
FAM200B-205ENST00000503617 FGD5Q6ZNL6 1462 aa39.88■■■■□ 3.98
FAM200B-205ENST00000503617 RAD54L2Q9Y4B4 1467 aa39.88■■■■□ 3.98
FAM200B-205ENST00000503617 SOGA1O94964 1423 aa39.87■■■■□ 3.97
FAM200B-205ENST00000503617 AQRO60306 1485 aaKnown RBP eCLIP39.83■■■■□ 3.97
FAM200B-205ENST00000503617 OSCARQ8IYS5 282 aa39.81■■■■□ 3.96
FAM200B-205ENST00000503617 TDRD9Q8NDG6 1382 aaKnown RBP39.7■■■■□ 3.95
FAM200B-205ENST00000503617 WDR97A6NE52 1622 aa39.64■■■■□ 3.94
FAM200B-205ENST00000503617 WRNQ14191 1432 aaPredicted RBP eCLIP39.55■■■■□ 3.92
FAM200B-205ENST00000503617 BIVM-ERCC5R4GMW8 1640 aa39.54■■■■□ 3.92
FAM200B-205ENST00000503617 CHD1O14646 1710 aa39.54■■■■□ 3.92
FAM200B-205ENST00000503617 TOP2BQ02880 1626 aa39.52■■■■□ 3.92
FAM200B-205ENST00000503617 SYNJ1O43426 1573 aa39.5■■■■□ 3.91
FAM200B-205ENST00000503617 ABCA10Q8WWZ4 1543 aa39.48■■■■□ 3.91
FAM200B-205ENST00000503617 SNAPC4Q5SXM2 1469 aa39.43■■■■□ 3.9
FAM200B-205ENST00000503617 GRIN2BQ13224 1484 aa39.43■■■■□ 3.9
FAM200B-205ENST00000503617 FBLN2P98095 1184 aa39.4■■■■□ 3.9
FAM200B-205ENST00000503617 GAPVD1Q14C86 1478 aa39.39■■■■□ 3.9
FAM200B-205ENST00000503617 PBRM1Q86U86 1689 aa39.38■■■■□ 3.9
FAM200B-205ENST00000503617 ABCA5Q8WWZ7 1642 aa39.37■■■■□ 3.89
FAM200B-205ENST00000503617 MAGI1Q96QZ7 1491 aaPredicted RBP39.36■■■■□ 3.89
FAM200B-205ENST00000503617 TRIM41Q8WV44 630 aa39.27■■■■□ 3.88
FAM200B-205ENST00000503617 RIMBP3CA6NJZ7 1639 aa39.25■■■■□ 3.87
FAM200B-205ENST00000503617 RIMBP3BA6NNM3 1639 aa39.25■■■■□ 3.87
FAM200B-205ENST00000503617 RIMBP3Q9UFD9 1639 aa39.25■■■■□ 3.87
FAM200B-205ENST00000503617 CHMP7Q8WUX9 453 aaPredicted RBP39.23■■■■□ 3.87
FAM200B-205ENST00000503617 SYNJ2O15056 1496 aa39.22■■■■□ 3.87
FAM200B-205ENST00000503617 ARHGEF11O15085 1522 aa39.17■■■■□ 3.86
FAM200B-205ENST00000503617 CLASP1Q7Z460 1538 aa39.07■■■■□ 3.84
FAM200B-205ENST00000503617 ADAMTS12P58397 1594 aa39.01■■■■□ 3.84
FAM200B-205ENST00000503617 ERICH3Q5RHP9 1530 aa38.99■■■■□ 3.83
FAM200B-205ENST00000503617 GRIN2AQ12879 1464 aa38.92■■■■□ 3.82
FAM200B-205ENST00000503617 FHAD1B1AJZ9 1412 aa38.91■■■■□ 3.82
FAM200B-205ENST00000503617 CYB5RLQ6IPT4 315 aa38.84■■■■□ 3.81
FAM200B-205ENST00000503617 ARAP1Q96P48 1450 aa38.84■■■■□ 3.81
FAM200B-205ENST00000503617 NUP160Q12769 1436 aa38.78■■■■□ 3.8
FAM200B-205ENST00000503617 CEP170Q5SW79 1584 aa38.78■■■■□ 3.8
FAM200B-205ENST00000503617 KIF27Q86VH2 1401 aa38.73■■■■□ 3.79
FAM200B-205ENST00000503617 IGF1RP08069 1367 aa38.68■■■■□ 3.78
FAM200B-205ENST00000503617 CUL7Q14999 1698 aa38.57■■■■□ 3.76
FAM200B-205ENST00000503617 SHROOM2Q13796 1616 aa38.56■■■■□ 3.76
FAM200B-205ENST00000503617 ERCC6L2Q5T890 1561 aa38.53■■■■□ 3.76
FAM200B-205ENST00000503617 RUSC2Q8N2Y8 1516 aa38.44■■■■□ 3.74
FAM200B-205ENST00000503617 CARMIL1Q5VZK9 1371 aa38.42■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms