RNA–Protein interactions for RNA: ENST00000503600.5

FAM200B-204, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 4

Gene FAM200B, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-204ENST00000503600 NISCHQ9Y2I1 1504 aa47.3■■■■■ 5.16
FAM200B-204ENST00000503600 ABCC9O60706 1549 aa43.2■■■■■ 4.51
FAM200B-204ENST00000503600 CCDC180Q9P1Z9 1646 aa42.8■■■■■ 4.44
FAM200B-204ENST00000503600 DNAJC5BQ9UF47 199 aa41.04■■■■■ 4.16
FAM200B-204ENST00000503600 RB1CC1Q8TDY2 1594 aa40.98■■■■■ 4.15
FAM200B-204ENST00000503600 NACADO15069 1562 aa40.57■■■■■ 4.09
FAM200B-204ENST00000503600 UNC13AQ9UPW8 1703 aa40.08■■■■■ 4.01
FAM200B-204ENST00000503600 PABPN1Q86U42 306 aaKnown RBP eCLIP40.08■■■■■ 4.01
FAM200B-204ENST00000503600 DCAF8L2P0C7V8 631 aa40.03■■■■■ 4
FAM200B-204ENST00000503600 MYO15BQ96JP2 1530 aa39.87■■■■□ 3.97
FAM200B-204ENST00000503600 BICRAQ9NZM4 1560 aa39.78■■■■□ 3.96
FAM200B-204ENST00000503600 SHROOM4Q9ULL8 1493 aa39.29■■■■□ 3.88
FAM200B-204ENST00000503600 DCAF1Q9Y4B6 1507 aa39.12■■■■□ 3.85
FAM200B-204ENST00000503600 ZCCHC6Q5VYS8 1495 aaKnown RBP39.08■■■■□ 3.85
FAM200B-204ENST00000503600 CC2D2AQ9P2K1 1620 aa39.07■■■■□ 3.85
FAM200B-204ENST00000503600 CECR2Q9BXF3 1484 aa39.02■■■■□ 3.84
FAM200B-204ENST00000503600 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
FAM200B-204ENST00000503600 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
FAM200B-204ENST00000503600 DNAJC5Q9H3Z4 198 aa38.2■■■■□ 3.71
FAM200B-204ENST00000503600 CUX2O14529 1486 aa37.59■■■■□ 3.61
FAM200B-204ENST00000503600 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
FAM200B-204ENST00000503600 ERCC6Q03468 1493 aa37.37■■■■□ 3.57
FAM200B-204ENST00000503600 ATAD2BQ9ULI0 1458 aa37.2■■■■□ 3.54
FAM200B-204ENST00000503600 HMGXB3Q12766 1538 aa37.12■■■■□ 3.53
FAM200B-204ENST00000503600 SMARCA2P51531 1590 aa37.12■■■■□ 3.53
FAM200B-204ENST00000503600 SMARCA4P51532 1647 aa37.04■■■■□ 3.52
FAM200B-204ENST00000503600 NESP48681 1621 aa36.95■■■■□ 3.51
FAM200B-204ENST00000503600 BAZ1BQ9UIG0 1483 aaKnown RBP36.81■■■■□ 3.48
FAM200B-204ENST00000503600 THOC2Q8NI27 1593 aaKnown RBP36.78■■■■□ 3.48
FAM200B-204ENST00000503600 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
FAM200B-204ENST00000503600 PEG3Q9GZU2 1588 aa36.74■■■■□ 3.47
FAM200B-204ENST00000503600 LAMC3Q9Y6N6 1575 aa36.71■■■■□ 3.47
FAM200B-204ENST00000503600 KIF21AQ7Z4S6 1674 aa36.53■■■■□ 3.44
FAM200B-204ENST00000503600 PDS5BQ9NTI5 1447 aa36.49■■■■□ 3.43
FAM200B-204ENST00000503600 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
FAM200B-204ENST00000503600 CADPSQ9ULU8 1353 aa36.24■■■■□ 3.39
FAM200B-204ENST00000503600 MRC2Q9UBG0 1479 aa36.18■■■■□ 3.38
FAM200B-204ENST00000503600 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
FAM200B-204ENST00000503600 WDR62O43379 1518 aa36.14■■■■□ 3.38
FAM200B-204ENST00000503600 WIZO95785 1651 aa35.95■■■■□ 3.35
FAM200B-204ENST00000503600 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
FAM200B-204ENST00000503600 FANCD2Q9BXW9 1451 aa35.81■■■■□ 3.32
FAM200B-204ENST00000503600 OSCARQ8IYS5 282 aa35.73■■■■□ 3.31
FAM200B-204ENST00000503600 CFTRP13569 1480 aa35.73■■■■□ 3.31
FAM200B-204ENST00000503600 URB2Q14146 1524 aaKnown RBP35.55■■■■□ 3.28
FAM200B-204ENST00000503600 TOP2AP11388 1531 aaKnown RBP35.48■■■■□ 3.27
FAM200B-204ENST00000503600 RSF1Q96T23 1441 aaPredicted RBP35.43■■■■□ 3.26
FAM200B-204ENST00000503600 PRDM2Q13029 1718 aa35.41■■■■□ 3.26
FAM200B-204ENST00000503600 RIMBP3CA6NJZ7 1639 aa35.34■■■■□ 3.25
FAM200B-204ENST00000503600 RIMBP3BA6NNM3 1639 aa35.34■■■■□ 3.25
FAM200B-204ENST00000503600 RIMBP3Q9UFD9 1639 aa35.34■■■■□ 3.25
FAM200B-204ENST00000503600 IFT140Q96RY7 1462 aa35.24■■■■□ 3.23
FAM200B-204ENST00000503600 ZNF608Q9ULD9 1512 aaPredicted RBP35.18■■■■□ 3.22
FAM200B-204ENST00000503600 ARHGEF11O15085 1522 aa35.15■■■■□ 3.22
FAM200B-204ENST00000503600 TOPBP1Q92547 1522 aa35.08■■■■□ 3.21
FAM200B-204ENST00000503600 CCDC88BA6NC98 1476 aa35.05■■■■□ 3.2
FAM200B-204ENST00000503600 ABCC8Q09428 1581 aa35.04■■■■□ 3.2
FAM200B-204ENST00000503600 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
FAM200B-204ENST00000503600 DNMBPQ6XZF7 1577 aa34.92■■■■□ 3.18
FAM200B-204ENST00000503600 CHD1O14646 1710 aa34.89■■■■□ 3.18
FAM200B-204ENST00000503600 CYB5RLQ6IPT4 315 aa34.87■■■■□ 3.17
FAM200B-204ENST00000503600 TARBP1Q13395 1621 aaKnown RBP34.84■■■■□ 3.17
FAM200B-204ENST00000503600 AQRO60306 1485 aaKnown RBP eCLIP34.78■■■■□ 3.16
FAM200B-204ENST00000503600 ARAP1Q96P48 1450 aa34.75■■■■□ 3.15
FAM200B-204ENST00000503600 POLA1P09884 1462 aaPredicted RBP34.67■■■■□ 3.14
FAM200B-204ENST00000503600 TRHP20396 242 aaPredicted RBP34.66■■■■□ 3.14
FAM200B-204ENST00000503600 FBLN2P98095 1184 aa34.63■■■■□ 3.13
FAM200B-204ENST00000503600 WDR97A6NE52 1622 aa34.53■■■■□ 3.12
FAM200B-204ENST00000503600 RAD54L2Q9Y4B4 1467 aa34.52■■■■□ 3.12
FAM200B-204ENST00000503600 SOGA1O94964 1423 aa34.5■■■■□ 3.11
FAM200B-204ENST00000503600 CLASP1Q7Z460 1538 aa34.47■■■■□ 3.11
FAM200B-204ENST00000503600 TDRD9Q8NDG6 1382 aaKnown RBP34.47■■■■□ 3.11
FAM200B-204ENST00000503600 SNAPC4Q5SXM2 1469 aa34.43■■■■□ 3.1
FAM200B-204ENST00000503600 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
FAM200B-204ENST00000503600 MAGI1Q96QZ7 1491 aaPredicted RBP34.38■■■■□ 3.09
FAM200B-204ENST00000503600 FGD5Q6ZNL6 1462 aa34.36■■■■□ 3.09
FAM200B-204ENST00000503600 CHMP7Q8WUX9 453 aaPredicted RBP34.34■■■■□ 3.09
FAM200B-204ENST00000503600 GRIN2BQ13224 1484 aa34.29■■■■□ 3.08
FAM200B-204ENST00000503600 SYNJ2O15056 1496 aa34.27■■■■□ 3.08
FAM200B-204ENST00000503600 CUX1P39880 1505 aa34.25■■■■□ 3.07
FAM200B-204ENST00000503600 PBRM1Q86U86 1689 aa34.15■■■■□ 3.06
FAM200B-204ENST00000503600 AEBP2Q6ZN18 517 aaPredicted RBP34.11■■■■□ 3.05
FAM200B-204ENST00000503600 GAPVD1Q14C86 1478 aa34.1■■■■□ 3.05
FAM200B-204ENST00000503600 ABCA5Q8WWZ7 1642 aa33.99■■■■□ 3.03
FAM200B-204ENST00000503600 ABCA10Q8WWZ4 1543 aa33.99■■■■□ 3.03
FAM200B-204ENST00000503600 GRIN2AQ12879 1464 aa33.84■■■■□ 3.01
FAM200B-204ENST00000503600 ERCC6L2Q5T890 1561 aa33.81■■■■□ 3
FAM200B-204ENST00000503600 NUP160Q12769 1436 aa33.78■■■■□ 3
FAM200B-204ENST00000503600 CEP170Q5SW79 1584 aa33.77■■■■□ 3
FAM200B-204ENST00000503600 ADAMTS12P58397 1594 aa33.76■■■□□ 2.99
FAM200B-204ENST00000503600 SHROOM2Q13796 1616 aa33.73■■■□□ 2.99
FAM200B-204ENST00000503600 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.99
FAM200B-204ENST00000503600 FHAD1B1AJZ9 1412 aa33.64■■■□□ 2.98
FAM200B-204ENST00000503600 KIF13AQ9H1H9 1805 aa33.61■■■□□ 2.97
FAM200B-204ENST00000503600 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
FAM200B-204ENST00000503600 TOP2BQ02880 1626 aa33.58■■■□□ 2.97
FAM200B-204ENST00000503600 ERICH3Q5RHP9 1530 aa33.57■■■□□ 2.96
FAM200B-204ENST00000503600 PRG4Q92954 1404 aaPredicted RBP33.45■■■□□ 2.95
FAM200B-204ENST00000503600 JPH4Q96JJ6 628 aa33.39■■■□□ 2.94
FAM200B-204ENST00000503600 ABCC10Q5T3U5 1492 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms