RNA–Protein interactions for RNA: ENST00000536754.5

MRE11-207, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-207ENST00000536754 AEBP2Q6ZN18 517 aaPredicted RBP25.84■■□□□ 1.73
MRE11-207ENST00000536754 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
MRE11-207ENST00000536754 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
MRE11-207ENST00000536754 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
MRE11-207ENST00000536754 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
MRE11-207ENST00000536754 FOXD1Q16676 465 aa20.25■□□□□ 0.83
MRE11-207ENST00000536754 PPP6R1Q9UPN7 881 aa19.66■□□□□ 0.74
MRE11-207ENST00000536754 ADRA2BP18089 450 aa19.6■□□□□ 0.73
MRE11-207ENST00000536754 PIAS4Q8N2W9 510 aaPredicted RBP19.08■□□□□ 0.64
MRE11-207ENST00000536754 MSH5O43196 834 aa18.52■□□□□ 0.56
MRE11-207ENST00000536754 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
MRE11-207ENST00000536754 KCNA4P22459 653 aa18.04■□□□□ 0.48
MRE11-207ENST00000536754 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
MRE11-207ENST00000536754 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
MRE11-207ENST00000536754 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
MRE11-207ENST00000536754 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
MRE11-207ENST00000536754 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
MRE11-207ENST00000536754 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
MRE11-207ENST00000536754 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
MRE11-207ENST00000536754 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
MRE11-207ENST00000536754 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
MRE11-207ENST00000536754 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
MRE11-207ENST00000536754 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
MRE11-207ENST00000536754 ZBTB22O15209 634 aa16.69■□□□□ 0.26
MRE11-207ENST00000536754 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
MRE11-207ENST00000536754 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
MRE11-207ENST00000536754 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
MRE11-207ENST00000536754 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
MRE11-207ENST00000536754 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
MRE11-207ENST00000536754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
MRE11-207ENST00000536754 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
MRE11-207ENST00000536754 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
MRE11-207ENST00000536754 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
MRE11-207ENST00000536754 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
MRE11-207ENST00000536754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
MRE11-207ENST00000536754 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
MRE11-207ENST00000536754 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
MRE11-207ENST00000536754 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
MRE11-207ENST00000536754 C1QBPQ07021 282 aaKnown RBP15.72■□□□□ 0.11
MRE11-207ENST00000536754 APLP2Q06481 763 aa15.62■□□□□ 0.09
MRE11-207ENST00000536754 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
MRE11-207ENST00000536754 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
MRE11-207ENST00000536754 CAPN15O75808 1086 aa15.43■□□□□ 0.06
MRE11-207ENST00000536754 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
MRE11-207ENST00000536754 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
MRE11-207ENST00000536754 DSG3P32926 999 aa15.24■□□□□ 0.03
MRE11-207ENST00000536754 POLA2Q14181 598 aa15.24■□□□□ 0.03
MRE11-207ENST00000536754 ABCB7O75027 752 aa15.2■□□□□ 0.02
MRE11-207ENST00000536754 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
MRE11-207ENST00000536754 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
MRE11-207ENST00000536754 FKBP8Q14318 412 aa14.98□□□□□ -0.01
MRE11-207ENST00000536754 FBLN2P98095 1184 aa14.97□□□□□ -0.01
MRE11-207ENST00000536754 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
MRE11-207ENST00000536754 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
MRE11-207ENST00000536754 PROM2Q8N271 834 aa14.73□□□□□ -0.05
MRE11-207ENST00000536754 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
MRE11-207ENST00000536754 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
MRE11-207ENST00000536754 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
MRE11-207ENST00000536754 SSUH2Q9Y2M2 353 aa14.63□□□□□ -0.07
MRE11-207ENST00000536754 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
MRE11-207ENST00000536754 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
MRE11-207ENST00000536754 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
MRE11-207ENST00000536754 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
MRE11-207ENST00000536754 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
MRE11-207ENST00000536754 VASPP50552 380 aaPredicted RBP14.24□□□□□ -0.13
MRE11-207ENST00000536754 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
MRE11-207ENST00000536754 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
MRE11-207ENST00000536754 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
MRE11-207ENST00000536754 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
MRE11-207ENST00000536754 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
MRE11-207ENST00000536754 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
MRE11-207ENST00000536754 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
MRE11-207ENST00000536754 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
MRE11-207ENST00000536754 MIER1Q8N108 512 aa13.92□□□□□ -0.18
MRE11-207ENST00000536754 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
MRE11-207ENST00000536754 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
MRE11-207ENST00000536754 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
MRE11-207ENST00000536754 MNX1P50219 401 aaPredicted RBP13.85□□□□□ -0.19
MRE11-207ENST00000536754 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
MRE11-207ENST00000536754 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
MRE11-207ENST00000536754 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
MRE11-207ENST00000536754 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
MRE11-207ENST00000536754 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
MRE11-207ENST00000536754 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
MRE11-207ENST00000536754 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
MRE11-207ENST00000536754 PKD2Q13563 968 aa13.71□□□□□ -0.21
MRE11-207ENST00000536754 NUBP1P53384 320 aa13.7□□□□□ -0.22
MRE11-207ENST00000536754 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
MRE11-207ENST00000536754 PRKAR2AP13861 404 aaKnown RBP13.66□□□□□ -0.22
MRE11-207ENST00000536754 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
MRE11-207ENST00000536754 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
MRE11-207ENST00000536754 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
MRE11-207ENST00000536754 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
MRE11-207ENST00000536754 GSE1Q14687 1217 aa13.48□□□□□ -0.25
MRE11-207ENST00000536754 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
MRE11-207ENST00000536754 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
MRE11-207ENST00000536754 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
MRE11-207ENST00000536754 RGL2O15211 777 aa13.42□□□□□ -0.26
MRE11-207ENST00000536754 SLC24A1O60721 1099 aa13.42□□□□□ -0.26
MRE11-207ENST00000536754 DCAF8Q5TAQ9 597 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms