Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 SLC27A1-205ENST00000598848 497 ntTSL 513.68□□□□□ -0.221e-6■□□□□ 8.7
PRPF8Q6P2Q9 PECR-208ENST00000497889 824 ntTSL 513.3□□□□□ -0.281e-6■□□□□ 8.7
PRPF8Q6P2Q9 PECR-207ENST00000487318 742 ntTSL 512.97□□□□□ -0.331e-6■□□□□ 8.7
PRPF8Q6P2Q9 SLC27A1-207ENST00000599965 788 ntTSL 312.95□□□□□ -0.341e-6■□□□□ 8.7
PRPF8Q6P2Q9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.79□□□□□ -0.361e-6■□□□□ 8.7
PRPF8Q6P2Q9 PECR-206ENST00000474093 585 ntTSL 211.9□□□□□ -0.51e-6■□□□□ 8.7
PRPF8Q6P2Q9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.51□□□□□ -0.571e-6■□□□□ 8.7
PRPF8Q6P2Q9 ACSS3-206ENST00000549175 534 ntTSL 510.92□□□□□ -0.661e-6■□□□□ 8.7
PRPF8Q6P2Q9 SLC27A1-203ENST00000594962 4343 ntTSL 510.68□□□□□ -0.71e-6■□□□□ 8.7
PRPF8Q6P2Q9 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.711e-6■□□□□ 8.7
PRPF8Q6P2Q9 APBB2-213ENST00000507831 575 ntTSL 410.41□□□□□ -0.741e-6■□□□□ 8.7
PRPF8Q6P2Q9 MYO1C-217ENST00000575011 385 ntTSL 310.05□□□□□ -0.81e-6■□□□□ 8.7
PRPF8Q6P2Q9 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC8.95□□□□□ -0.981e-6■□□□□ 8.7
PRPF8Q6P2Q9 APBB2-228ENST00000514094 856 ntTSL 47.72□□□□□ -1.171e-6■□□□□ 8.7
PRPF8Q6P2Q9 LDB1-203ENST00000461873 478 ntTSL 27.56□□□□□ -1.21e-6■□□□□ 8.7
PRPF8Q6P2Q9 LINC00479-203ENST00000586552 292 ntTSL 1 (best)7.43□□□□□ -1.221e-6■□□□□ 8.7
PRPF8Q6P2Q9 LINC00479-202ENST00000457881 560 ntTSL 56.79□□□□□ -1.321e-6■□□□□ 8.7
PRPF8Q6P2Q9 APBB2-227ENST00000513611 2964 ntTSL 56.31□□□□□ -1.41e-6■□□□□ 8.7
PRPF8Q6P2Q9 ZCCHC2-203ENST00000585949 2429 ntTSL 26.29□□□□□ -1.41e-6■□□□□ 8.7
PRPF8Q6P2Q9 PECR-204ENST00000464722 640 ntTSL 45.08□□□□□ -1.61e-6■□□□□ 8.7
PRPF8Q6P2Q9 APBB2-225ENST00000513493 426 ntTSL 53.92□□□□□ -1.781e-6■□□□□ 8.7
PRPF8Q6P2Q9 RNF213-214ENST00000572622 320 ntTSL 310.32□□□□□ -0.769e-9■□□□□ 8.7
PRPF8Q6P2Q9 RNF213-219ENST00000574909 298 ntTSL 36.57□□□□□ -1.369e-9■□□□□ 8.7
PRPF8Q6P2Q9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.033e-10■□□□□ 8.7
PRPF8Q6P2Q9 BRMS1L-202ENST00000547420 650 ntTSL 313.67□□□□□ -0.223e-10■□□□□ 8.7
PRPF8Q6P2Q9 PHLDA3-204ENST00000497057 582 ntTSL 213.18□□□□□ -0.33e-10■□□□□ 8.7
PRPF8Q6P2Q9 BRMS1L-205ENST00000552677 1544 ntTSL 211.81□□□□□ -0.523e-10■□□□□ 8.7
PRPF8Q6P2Q9 Z95331.1-201ENST00000623075 23112 ntBASIC5.1□□□□□ -1.593e-10■□□□□ 8.7
PRPF8Q6P2Q9 BRMS1L-203ENST00000548758 1077 ntTSL 1 (best)4.73□□□□□ -1.653e-10■□□□□ 8.7
PRPF8Q6P2Q9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.377e-7■□□□□ 8.7
PRPF8Q6P2Q9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.037e-7■□□□□ 8.7
PRPF8Q6P2Q9 TNFAIP2-205ENST00000559406 1799 ntTSL 513.42□□□□□ -0.267e-7■□□□□ 8.7
PRPF8Q6P2Q9 TNFAIP2-207ENST00000560562 1429 ntTSL 1 (best)12.18□□□□□ -0.467e-7■□□□□ 8.7
PRPF8Q6P2Q9 TNFAIP2-208ENST00000560670 1334 ntTSL 211.45□□□□□ -0.587e-7■□□□□ 8.7
PRPF8Q6P2Q9 MIR7703-201ENST00000620784 77 ntBASIC4.59□□□□□ -1.674e-7■□□□□ 8.7
PRPF8Q6P2Q9 FOXA1-202ENST00000545425 1806 ntTSL 217.18■□□□□ 0.342e-10■□□□□ 8.7
PRPF8Q6P2Q9 CASC3-209ENST00000583902 557 ntTSL 27.6□□□□□ -1.196e-6■□□□□ 8.7
PRPF8Q6P2Q9 TNFAIP3-202ENST00000420009 698 ntTSL 39.05□□□□□ -0.961e-6■□□□□ 8.7
PRPF8Q6P2Q9 ENC1-203ENST00000509127 584 ntTSL 317.04■□□□□ 0.327e-9■□□□□ 8.6
PRPF8Q6P2Q9 ENC1-202ENST00000508331 1405 ntTSL 416.51■□□□□ 0.237e-9■□□□□ 8.6
PRPF8Q6P2Q9 FUOM-206ENST00000478895 445 ntTSL 312.14□□□□□ -0.477e-9■□□□□ 8.6
PRPF8Q6P2Q9 WDR83OS-204ENST00000600694 567 ntTSL 49.01□□□□□ -0.977e-9■□□□□ 8.6
PRPF8Q6P2Q9 CACUL1-205ENST00000490610 394 ntTSL 27.35□□□□□ -1.237e-9■□□□□ 8.6
PRPF8Q6P2Q9 CACUL1-207ENST00000544392 1060 ntTSL 27.04□□□□□ -1.287e-9■□□□□ 8.6
PRPF8Q6P2Q9 CACUL1-204ENST00000489169 517 ntTSL 25.96□□□□□ -1.467e-9■□□□□ 8.6
PRPF8Q6P2Q9 GPHN-206ENST00000553936 574 ntTSL 35.81□□□□□ -1.487e-9■□□□□ 8.6
PRPF8Q6P2Q9 GPHN-215ENST00000557654 503 ntTSL 42.33□□□□□ -2.047e-9■□□□□ 8.6
PRPF8Q6P2Q9 GPHN-210ENST00000555668 550 ntTSL 42.23□□□□□ -2.057e-9■□□□□ 8.6
PRPF8Q6P2Q9 GPHN-214ENST00000556633 512 ntTSL 31.22□□□□□ -2.217e-9■□□□□ 8.6
PRPF8Q6P2Q9 CHMP4A-203ENST00000527154 571 ntTSL 214.71□□□□□ -0.053e-10■□□□□ 8.6
PRPF8Q6P2Q9 CHMP4A-210ENST00000552620 716 ntTSL 24.29□□□□□ -1.723e-10■□□□□ 8.6
PRPF8Q6P2Q9 CHMP4A-208ENST00000534106 370 ntTSL 52.77□□□□□ -1.973e-10■□□□□ 8.6
PRPF8Q6P2Q9 RFNG-203ENST00000578356 649 ntTSL 514.28□□□□□ -0.121e-7■□□□□ 8.6
PRPF8Q6P2Q9 RFNG-210ENST00000584463 424 ntTSL 311.27□□□□□ -0.61e-7■□□□□ 8.6
PRPF8Q6P2Q9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.382e-7■□□□□ 8.6
PRPF8Q6P2Q9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.192e-7■□□□□ 8.6
PRPF8Q6P2Q9 PRKAR2B-202ENST00000393613 642 ntTSL 33.27□□□□□ -1.892e-7■□□□□ 8.6
PRPF8Q6P2Q9 PRKAR2B-203ENST00000488792 609 ntTSL 32.73□□□□□ -1.972e-7■□□□□ 8.6
PRPF8Q6P2Q9 DPP7-202ENST00000460830 639 ntTSL 216.92■□□□□ 0.31e-15■□□□□ 8.6
PRPF8Q6P2Q9 DPP7-203ENST00000463619 775 ntTSL 312.14□□□□□ -0.471e-15■□□□□ 8.6
PRPF8Q6P2Q9 SYNJ2-209ENST00000640569 2040 nt14.57□□□□□ -0.081e-33■□□□□ 8.6
PRPF8Q6P2Q9 CALM1-210ENST00000555132 554 ntTSL 415.72■□□□□ 0.112e-6■□□□□ 8.6
PRPF8Q6P2Q9 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC8.46□□□□□ -1.062e-6■□□□□ 8.6
PRPF8Q6P2Q9 MYO1C-220ENST00000575864 601 ntTSL 217.26■□□□□ 0.351e-6■□□□□ 8.6
PRPF8Q6P2Q9 ACSF2-209ENST00000506052 701 ntTSL 39.66□□□□□ -0.867e-18■□□□□ 8.6
PRPF8Q6P2Q9 KRTCAP3-205ENST00000464699 724 ntTSL 321.45■■□□□ 1.021e-6■□□□□ 8.6
PRPF8Q6P2Q9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.171e-6■□□□□ 8.6
PRPF8Q6P2Q9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.151e-6■□□□□ 8.6
PRPF8Q6P2Q9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.56■□□□□ 0.081e-6■□□□□ 8.6
PRPF8Q6P2Q9 KRTCAP3-204ENST00000453171 665 ntTSL 310.07□□□□□ -0.81e-6■□□□□ 8.6
PRPF8Q6P2Q9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.69□□□□□ -1.821e-6■□□□□ 8.6
PRPF8Q6P2Q9 SEC23A-205ENST00000553925 484 ntTSL 31.74□□□□□ -2.132e-8■□□□□ 8.6
PRPF8Q6P2Q9 MIPOL1-212ENST00000556615 732 ntTSL 314.63□□□□□ -0.072e-6■□□□□ 8.6
PRPF8Q6P2Q9 MIPOL1-213ENST00000556753 775 ntTSL 511.66□□□□□ -0.542e-6■□□□□ 8.6
PRPF8Q6P2Q9 DPP7-210ENST00000483783 958 ntTSL 218.77■□□□□ 0.591e-15■□□□□ 8.6
PRPF8Q6P2Q9 NIPA2-210ENST00000561072 574 ntTSL 421.84■■□□□ 1.092e-7■□□□□ 8.6
PRPF8Q6P2Q9 PRNP-204ENST00000457586 855 ntTSL 1 (best)20.22■□□□□ 0.832e-7■□□□□ 8.6
PRPF8Q6P2Q9 PHF23-208ENST00000574236 583 ntTSL 320.01■□□□□ 0.792e-7■□□□□ 8.6
PRPF8Q6P2Q9 PHF23-211ENST00000574899 370 ntTSL 320.01■□□□□ 0.792e-7■□□□□ 8.6
PRPF8Q6P2Q9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.672e-7■□□□□ 8.6
PRPF8Q6P2Q9 NIPA2-206ENST00000559571 673 ntTSL 319.09■□□□□ 0.652e-7■□□□□ 8.6
PRPF8Q6P2Q9 NIPA2-209ENST00000560762 534 ntTSL 518.48■□□□□ 0.552e-7■□□□□ 8.6
PRPF8Q6P2Q9 NIPA2-208ENST00000560205 589 ntTSL 418.42■□□□□ 0.542e-7■□□□□ 8.6
PRPF8Q6P2Q9 PHF23-210ENST00000574407 497 ntTSL 218.14■□□□□ 0.492e-7■□□□□ 8.6
PRPF8Q6P2Q9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.94■□□□□ 0.462e-7■□□□□ 8.6
PRPF8Q6P2Q9 XPO6-209ENST00000566073 715 ntTSL 517.75■□□□□ 0.432e-7■□□□□ 8.6
PRPF8Q6P2Q9 PHF23-207ENST00000573826 685 ntTSL 316.37■□□□□ 0.212e-7■□□□□ 8.6
PRPF8Q6P2Q9 PHF23-206ENST00000572789 1006 ntTSL 216.01■□□□□ 0.152e-7■□□□□ 8.6
PRPF8Q6P2Q9 VKORC1-207ENST00000472468 461 ntTSL 215.8■□□□□ 0.122e-7■□□□□ 8.6
PRPF8Q6P2Q9 PRNP-202ENST00000424424 806 ntTSL 1 (best)15.78■□□□□ 0.122e-7■□□□□ 8.6
PRPF8Q6P2Q9 LPCAT1-204ENST00000507282 417 ntTSL 214.58□□□□□ -0.082e-7■□□□□ 8.6
PRPF8Q6P2Q9 CIC-208ENST00000575839 335 ntTSL 514.02□□□□□ -0.172e-7■□□□□ 8.6
PRPF8Q6P2Q9 SCAMP2-210ENST00000569124 538 ntTSL 413.62□□□□□ -0.232e-7■□□□□ 8.6
PRPF8Q6P2Q9 ANAPC7-211ENST00000552087 910 ntTSL 513.27□□□□□ -0.282e-7■□□□□ 8.6
PRPF8Q6P2Q9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.16□□□□□ -0.32e-7■□□□□ 8.6
PRPF8Q6P2Q9 PHF23-209ENST00000574323 575 ntTSL 412.04□□□□□ -0.482e-7■□□□□ 8.6
PRPF8Q6P2Q9 WWP2-212ENST00000568185 590 ntTSL 412.02□□□□□ -0.492e-7■□□□□ 8.6
PRPF8Q6P2Q9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.542e-7■□□□□ 8.6
PRPF8Q6P2Q9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.582e-7■□□□□ 8.6
PRPF8Q6P2Q9 AGPAT3-208ENST00000448287 454 ntTSL 39.76□□□□□ -0.852e-7■□□□□ 8.6
Retrieved 100 of 73,762 protein–RNA pairs in 4783.4 ms