RNA–Protein interactions for RNA: ENST00000454255.6

PHF23-202, Transcript of PHD finger protein 23, humanhuman

TSL 2 BASIC

Gene PHF23, Length 1,662 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF23-202ENST00000454255 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
PHF23-202ENST00000454255 CCDC180Q9P1Z9 1646 aa32.82■■■□□ 2.85
PHF23-202ENST00000454255 ZCCHC6Q5VYS8 1495 aaKnown RBP31.56■■■□□ 2.64
PHF23-202ENST00000454255 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
PHF23-202ENST00000454255 ABCC9O60706 1549 aa31.01■■■□□ 2.56
PHF23-202ENST00000454255 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
PHF23-202ENST00000454255 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
PHF23-202ENST00000454255 SHROOM4Q9ULL8 1493 aa30.6■■■□□ 2.49
PHF23-202ENST00000454255 NACADO15069 1562 aa30.5■■■□□ 2.47
PHF23-202ENST00000454255 RB1CC1Q8TDY2 1594 aa30.27■■■□□ 2.44
PHF23-202ENST00000454255 SCRIBQ14160 1630 aa30.19■■■□□ 2.42
PHF23-202ENST00000454255 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
PHF23-202ENST00000454255 BICRAQ9NZM4 1560 aa29.42■■■□□ 2.3
PHF23-202ENST00000454255 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
PHF23-202ENST00000454255 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
PHF23-202ENST00000454255 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
PHF23-202ENST00000454255 RSF1Q96T23 1441 aaPredicted RBP29.1■■■□□ 2.25
PHF23-202ENST00000454255 MROH2BQ7Z745 1585 aa29.04■■■□□ 2.24
PHF23-202ENST00000454255 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
PHF23-202ENST00000454255 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
PHF23-202ENST00000454255 WIZO95785 1651 aa28.84■■■□□ 2.21
PHF23-202ENST00000454255 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
PHF23-202ENST00000454255 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
PHF23-202ENST00000454255 TOP2AP11388 1531 aaKnown RBP28.5■■■□□ 2.15
PHF23-202ENST00000454255 ATAD2BQ9ULI0 1458 aa28.39■■■□□ 2.13
PHF23-202ENST00000454255 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
PHF23-202ENST00000454255 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
PHF23-202ENST00000454255 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
PHF23-202ENST00000454255 CCDC88BA6NC98 1476 aa28.17■■■□□ 2.1
PHF23-202ENST00000454255 HMGXB3Q12766 1538 aa28.14■■■□□ 2.1
PHF23-202ENST00000454255 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
PHF23-202ENST00000454255 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
PHF23-202ENST00000454255 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
PHF23-202ENST00000454255 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
PHF23-202ENST00000454255 TRIM41Q8WV44 630 aa27.57■■■□□ 2
PHF23-202ENST00000454255 PRDM2Q13029 1718 aa27.52■■■□□ 2
PHF23-202ENST00000454255 CFTRP13569 1480 aa27.51■■□□□ 1.99
PHF23-202ENST00000454255 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
PHF23-202ENST00000454255 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
PHF23-202ENST00000454255 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
PHF23-202ENST00000454255 NESP48681 1621 aa27.25■■□□□ 1.95
PHF23-202ENST00000454255 BIVM-ERCC5R4GMW8 1640 aa27.23■■□□□ 1.95
PHF23-202ENST00000454255 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
PHF23-202ENST00000454255 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
PHF23-202ENST00000454255 CUX1P39880 1505 aa27.16■■□□□ 1.94
PHF23-202ENST00000454255 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
PHF23-202ENST00000454255 FAM9AQ8IZU1 332 aaPredicted RBP27.11■■□□□ 1.93
PHF23-202ENST00000454255 SOGA1O94964 1423 aa27.05■■□□□ 1.92
PHF23-202ENST00000454255 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
PHF23-202ENST00000454255 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
PHF23-202ENST00000454255 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
PHF23-202ENST00000454255 CEP164Q9UPV0 1460 aa26.97■■□□□ 1.91
PHF23-202ENST00000454255 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
PHF23-202ENST00000454255 EEA1Q15075 1411 aa26.93■■□□□ 1.9
PHF23-202ENST00000454255 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
PHF23-202ENST00000454255 TOPBP1Q92547 1522 aa26.86■■□□□ 1.89
PHF23-202ENST00000454255 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
PHF23-202ENST00000454255 URB2Q14146 1524 aaKnown RBP26.83■■□□□ 1.89
PHF23-202ENST00000454255 EHMT2Q96KQ7 1210 aa26.76■■□□□ 1.87
PHF23-202ENST00000454255 CSRNP3Q8WYN3 585 aa26.75■■□□□ 1.87
PHF23-202ENST00000454255 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
PHF23-202ENST00000454255 KIF21BO75037 1637 aa26.68■■□□□ 1.86
PHF23-202ENST00000454255 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
PHF23-202ENST00000454255 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
PHF23-202ENST00000454255 CUX2O14529 1486 aa26.64■■□□□ 1.86
PHF23-202ENST00000454255 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
PHF23-202ENST00000454255 RAD54L2Q9Y4B4 1467 aa26.63■■□□□ 1.85
PHF23-202ENST00000454255 GOLGA3Q08378 1498 aa26.61■■□□□ 1.85
PHF23-202ENST00000454255 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.85
PHF23-202ENST00000454255 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
PHF23-202ENST00000454255 WDR62O43379 1518 aa26.55■■□□□ 1.84
PHF23-202ENST00000454255 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
PHF23-202ENST00000454255 PRXQ9BXM0 1461 aa26.51■■□□□ 1.83
PHF23-202ENST00000454255 RAPGEF2Q9Y4G8 1499 aa26.51■■□□□ 1.83
PHF23-202ENST00000454255 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
PHF23-202ENST00000454255 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
PHF23-202ENST00000454255 TNIKQ9UKE5 1360 aa26.48■■□□□ 1.83
PHF23-202ENST00000454255 ABCA5Q8WWZ7 1642 aa26.45■■□□□ 1.82
PHF23-202ENST00000454255 IGF1RP08069 1367 aa26.42■■□□□ 1.82
PHF23-202ENST00000454255 UBTFP17480 764 aaKnown RBP26.41■■□□□ 1.82
PHF23-202ENST00000454255 CEP162Q5TB80 1403 aa26.38■■□□□ 1.81
PHF23-202ENST00000454255 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
PHF23-202ENST00000454255 CUL7Q14999 1698 aa26.32■■□□□ 1.8
PHF23-202ENST00000454255 GAPVD1Q14C86 1478 aa26.31■■□□□ 1.8
PHF23-202ENST00000454255 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
PHF23-202ENST00000454255 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
PHF23-202ENST00000454255 CARMIL1Q5VZK9 1371 aa26.29■■□□□ 1.8
PHF23-202ENST00000454255 ZNF608Q9ULD9 1512 aaPredicted RBP26.21■■□□□ 1.79
PHF23-202ENST00000454255 AQRO60306 1485 aaKnown RBP eCLIP26.19■■□□□ 1.788e-8■■■■□ 21.5
PHF23-202ENST00000454255 EIF4G3O43432 1585 aaKnown RBP26.17■■□□□ 1.78
PHF23-202ENST00000454255 CLIP1P30622 1438 aa26.17■■□□□ 1.78
PHF23-202ENST00000454255 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
PHF23-202ENST00000454255 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
PHF23-202ENST00000454255 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
PHF23-202ENST00000454255 RANGAP1P46060 587 aaPredicted RBP26.03■■□□□ 1.76
PHF23-202ENST00000454255 FHAD1B1AJZ9 1412 aa26.01■■□□□ 1.75
PHF23-202ENST00000454255 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
PHF23-202ENST00000454255 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
PHF23-202ENST00000454255 ARHGAP35Q9NRY4 1499 aa25.95■■□□□ 1.74
PHF23-202ENST00000454255 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms