RNA–Protein interactions for RNA: ENST00000457881.5

LINC00479-202, long intergenic non-protein coding RNA 479, humanhuman

TSL 5

Gene LINC00479, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-202ENST00000457881 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
LINC00479-202ENST00000457881 ABCC9O60706 1549 aa18.08■□□□□ 0.48
LINC00479-202ENST00000457881 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
LINC00479-202ENST00000457881 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
LINC00479-202ENST00000457881 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.31
LINC00479-202ENST00000457881 NACADO15069 1562 aa16.81■□□□□ 0.28
LINC00479-202ENST00000457881 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00479-202ENST00000457881 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
LINC00479-202ENST00000457881 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
LINC00479-202ENST00000457881 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
LINC00479-202ENST00000457881 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
LINC00479-202ENST00000457881 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
LINC00479-202ENST00000457881 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
LINC00479-202ENST00000457881 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
LINC00479-202ENST00000457881 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
LINC00479-202ENST00000457881 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
LINC00479-202ENST00000457881 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
LINC00479-202ENST00000457881 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
LINC00479-202ENST00000457881 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
LINC00479-202ENST00000457881 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
LINC00479-202ENST00000457881 HRCP23327 699 aa15.94■□□□□ 0.14
LINC00479-202ENST00000457881 CUX2O14529 1486 aa15.82■□□□□ 0.12
LINC00479-202ENST00000457881 MYT1Q01538 1121 aa15.63■□□□□ 0.09
LINC00479-202ENST00000457881 ERCC6Q03468 1493 aa15.62■□□□□ 0.09
LINC00479-202ENST00000457881 NCAPD3P42695 1498 aa15.58■□□□□ 0.08
LINC00479-202ENST00000457881 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
LINC00479-202ENST00000457881 NESP48681 1621 aa15.41■□□□□ 0.06
LINC00479-202ENST00000457881 HMGXB3Q12766 1538 aa15.38■□□□□ 0.05
LINC00479-202ENST00000457881 ZEB1P37275 1124 aaPredicted RBP15.36■□□□□ 0.05
LINC00479-202ENST00000457881 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
LINC00479-202ENST00000457881 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
LINC00479-202ENST00000457881 SMARCA2P51531 1590 aa15.33■□□□□ 0.05
LINC00479-202ENST00000457881 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
LINC00479-202ENST00000457881 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
LINC00479-202ENST00000457881 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
LINC00479-202ENST00000457881 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
LINC00479-202ENST00000457881 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
LINC00479-202ENST00000457881 PDS5BQ9NTI5 1447 aa15.18■□□□□ 0.02
LINC00479-202ENST00000457881 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
LINC00479-202ENST00000457881 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
LINC00479-202ENST00000457881 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
LINC00479-202ENST00000457881 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
LINC00479-202ENST00000457881 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
LINC00479-202ENST00000457881 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
LINC00479-202ENST00000457881 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
LINC00479-202ENST00000457881 MRC2Q9UBG0 1479 aa15.08■□□□□ 0
LINC00479-202ENST00000457881 CADPSQ9ULU8 1353 aa15.06■□□□□ 0
LINC00479-202ENST00000457881 WDR62O43379 1518 aa15.06■□□□□ 0
LINC00479-202ENST00000457881 OSCARQ8IYS5 282 aa15.02■□□□□ -0
LINC00479-202ENST00000457881 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
LINC00479-202ENST00000457881 PPARGC1BQ86YN6 1023 aaKnown RBP14.98□□□□□ -0.01
LINC00479-202ENST00000457881 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
LINC00479-202ENST00000457881 FANCD2Q9BXW9 1451 aa14.86□□□□□ -0.03
LINC00479-202ENST00000457881 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
LINC00479-202ENST00000457881 RIMBP3CA6NJZ7 1639 aa14.82□□□□□ -0.04
LINC00479-202ENST00000457881 RIMBP3BA6NNM3 1639 aa14.82□□□□□ -0.04
LINC00479-202ENST00000457881 RIMBP3Q9UFD9 1639 aa14.82□□□□□ -0.04
LINC00479-202ENST00000457881 CFTRP13569 1480 aa14.8□□□□□ -0.04
LINC00479-202ENST00000457881 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
LINC00479-202ENST00000457881 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
LINC00479-202ENST00000457881 WIZO95785 1651 aa14.74□□□□□ -0.05
LINC00479-202ENST00000457881 ACIN1Q9UKV3 1341 aaKnown RBP14.7□□□□□ -0.06
LINC00479-202ENST00000457881 CENPBP07199 599 aaPredicted RBP14.69□□□□□ -0.06
LINC00479-202ENST00000457881 CYB5RLQ6IPT4 315 aa14.66□□□□□ -0.06
LINC00479-202ENST00000457881 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
LINC00479-202ENST00000457881 IFT140Q96RY7 1462 aa14.65□□□□□ -0.06
LINC00479-202ENST00000457881 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
LINC00479-202ENST00000457881 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
LINC00479-202ENST00000457881 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
LINC00479-202ENST00000457881 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
LINC00479-202ENST00000457881 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
LINC00479-202ENST00000457881 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
LINC00479-202ENST00000457881 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
LINC00479-202ENST00000457881 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
LINC00479-202ENST00000457881 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
LINC00479-202ENST00000457881 PRDM2Q13029 1718 aa14.48□□□□□ -0.09
LINC00479-202ENST00000457881 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
LINC00479-202ENST00000457881 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.09
LINC00479-202ENST00000457881 CHD1O14646 1710 aa14.45□□□□□ -0.1
LINC00479-202ENST00000457881 TARBP1Q13395 1621 aaKnown RBP14.43□□□□□ -0.1
LINC00479-202ENST00000457881 DNMBPQ6XZF7 1577 aa14.42□□□□□ -0.1
LINC00479-202ENST00000457881 FBLN2P98095 1184 aa14.41□□□□□ -0.1
LINC00479-202ENST00000457881 NEUROD1Q13562 356 aa14.41□□□□□ -0.1
LINC00479-202ENST00000457881 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
LINC00479-202ENST00000457881 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
LINC00479-202ENST00000457881 CLASP1Q7Z460 1538 aa14.36□□□□□ -0.11
LINC00479-202ENST00000457881 GTF3C3Q9Y5Q9 886 aa14.36□□□□□ -0.11
LINC00479-202ENST00000457881 POLA1P09884 1462 aaPredicted RBP14.35□□□□□ -0.11
LINC00479-202ENST00000457881 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
LINC00479-202ENST00000457881 ERICH6Q7L0X2 663 aa14.32□□□□□ -0.12
LINC00479-202ENST00000457881 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
LINC00479-202ENST00000457881 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
LINC00479-202ENST00000457881 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
LINC00479-202ENST00000457881 SOGA1O94964 1423 aa14.28□□□□□ -0.12
LINC00479-202ENST00000457881 SYNJ1O43426 1573 aa14.27□□□□□ -0.12
LINC00479-202ENST00000457881 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
LINC00479-202ENST00000457881 DAXXQ9UER7 740 aaPredicted RBP14.27□□□□□ -0.13
LINC00479-202ENST00000457881 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
LINC00479-202ENST00000457881 MAGI1Q96QZ7 1491 aaPredicted RBP14.25□□□□□ -0.13
LINC00479-202ENST00000457881 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms