RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
TNFAIP3-202ENST00000420009 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
TNFAIP3-202ENST00000420009 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
TNFAIP3-202ENST00000420009 ABCC9O60706 1549 aa23.79■■□□□ 1.4
TNFAIP3-202ENST00000420009 CCDC180Q9P1Z9 1646 aa23.6■■□□□ 1.37
TNFAIP3-202ENST00000420009 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
TNFAIP3-202ENST00000420009 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
TNFAIP3-202ENST00000420009 NACADO15069 1562 aa22.36■■□□□ 1.17
TNFAIP3-202ENST00000420009 SENP3Q9H4L4 574 aaPredicted RBP22.12■■□□□ 1.13
TNFAIP3-202ENST00000420009 PABPN1Q86U42 306 aaKnown RBP eCLIP22.06■■□□□ 1.12
TNFAIP3-202ENST00000420009 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
TNFAIP3-202ENST00000420009 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
TNFAIP3-202ENST00000420009 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
TNFAIP3-202ENST00000420009 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
TNFAIP3-202ENST00000420009 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
TNFAIP3-202ENST00000420009 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
TNFAIP3-202ENST00000420009 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
TNFAIP3-202ENST00000420009 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
TNFAIP3-202ENST00000420009 CC2D2AQ9P2K1 1620 aa21.5■■□□□ 1.03
TNFAIP3-202ENST00000420009 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
TNFAIP3-202ENST00000420009 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
TNFAIP3-202ENST00000420009 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
TNFAIP3-202ENST00000420009 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
TNFAIP3-202ENST00000420009 FOXD1Q16676 465 aa20.68■□□□□ 0.9
TNFAIP3-202ENST00000420009 CUX2O14529 1486 aa20.65■□□□□ 0.9
TNFAIP3-202ENST00000420009 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
TNFAIP3-202ENST00000420009 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
TNFAIP3-202ENST00000420009 ATAD2BQ9ULI0 1458 aa20.55■□□□□ 0.88
TNFAIP3-202ENST00000420009 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
TNFAIP3-202ENST00000420009 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
TNFAIP3-202ENST00000420009 SMARCA4P51532 1647 aa20.45■□□□□ 0.87
TNFAIP3-202ENST00000420009 NESP48681 1621 aa20.38■□□□□ 0.85
TNFAIP3-202ENST00000420009 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
TNFAIP3-202ENST00000420009 BAZ1BQ9UIG0 1483 aaKnown RBP20.31■□□□□ 0.84
TNFAIP3-202ENST00000420009 PEG3Q9GZU2 1588 aa20.3■□□□□ 0.84
TNFAIP3-202ENST00000420009 THOC2Q8NI27 1593 aaKnown RBP20.27■□□□□ 0.84
TNFAIP3-202ENST00000420009 LAMC3Q9Y6N6 1575 aa20.22■□□□□ 0.83
TNFAIP3-202ENST00000420009 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
TNFAIP3-202ENST00000420009 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
TNFAIP3-202ENST00000420009 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
TNFAIP3-202ENST00000420009 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
TNFAIP3-202ENST00000420009 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
TNFAIP3-202ENST00000420009 WDR62O43379 1518 aa19.93■□□□□ 0.78
TNFAIP3-202ENST00000420009 WIZO95785 1651 aa19.86■□□□□ 0.77
TNFAIP3-202ENST00000420009 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
TNFAIP3-202ENST00000420009 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
TNFAIP3-202ENST00000420009 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
TNFAIP3-202ENST00000420009 FANCD2Q9BXW9 1451 aa19.76■□□□□ 0.75
TNFAIP3-202ENST00000420009 CFTRP13569 1480 aa19.73■□□□□ 0.75
TNFAIP3-202ENST00000420009 TOP2AP11388 1531 aaKnown RBP19.64■□□□□ 0.73
TNFAIP3-202ENST00000420009 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
TNFAIP3-202ENST00000420009 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
TNFAIP3-202ENST00000420009 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
TNFAIP3-202ENST00000420009 MSH5O43196 834 aa19.51■□□□□ 0.71
TNFAIP3-202ENST00000420009 PRDM2Q13029 1718 aa19.49■□□□□ 0.71
TNFAIP3-202ENST00000420009 IFT140Q96RY7 1462 aa19.42■□□□□ 0.7
TNFAIP3-202ENST00000420009 ZNF608Q9ULD9 1512 aaPredicted RBP19.42■□□□□ 0.7
TNFAIP3-202ENST00000420009 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
TNFAIP3-202ENST00000420009 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
TNFAIP3-202ENST00000420009 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
TNFAIP3-202ENST00000420009 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
TNFAIP3-202ENST00000420009 TOPBP1Q92547 1522 aa19.37■□□□□ 0.69
TNFAIP3-202ENST00000420009 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
TNFAIP3-202ENST00000420009 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
TNFAIP3-202ENST00000420009 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
TNFAIP3-202ENST00000420009 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
TNFAIP3-202ENST00000420009 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
TNFAIP3-202ENST00000420009 CHD1O14646 1710 aa19.19■□□□□ 0.66
TNFAIP3-202ENST00000420009 AQRO60306 1485 aaKnown RBP eCLIP19.17■□□□□ 0.663e-6■■■□□ 18
TNFAIP3-202ENST00000420009 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
TNFAIP3-202ENST00000420009 PIAS4Q8N2W9 510 aaPredicted RBP19.16■□□□□ 0.66
TNFAIP3-202ENST00000420009 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
TNFAIP3-202ENST00000420009 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
TNFAIP3-202ENST00000420009 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
TNFAIP3-202ENST00000420009 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
TNFAIP3-202ENST00000420009 WDR97A6NE52 1622 aa19.03■□□□□ 0.64
TNFAIP3-202ENST00000420009 FBLN2P98095 1184 aa19.03■□□□□ 0.64
TNFAIP3-202ENST00000420009 SOGA1O94964 1423 aa19.02■□□□□ 0.64
TNFAIP3-202ENST00000420009 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
TNFAIP3-202ENST00000420009 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
TNFAIP3-202ENST00000420009 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
TNFAIP3-202ENST00000420009 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
TNFAIP3-202ENST00000420009 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
TNFAIP3-202ENST00000420009 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
TNFAIP3-202ENST00000420009 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
TNFAIP3-202ENST00000420009 CUX1P39880 1505 aa18.95■□□□□ 0.62
TNFAIP3-202ENST00000420009 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
TNFAIP3-202ENST00000420009 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
TNFAIP3-202ENST00000420009 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
TNFAIP3-202ENST00000420009 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
TNFAIP3-202ENST00000420009 ADRA2BP18089 450 aa18.86■□□□□ 0.61
TNFAIP3-202ENST00000420009 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
TNFAIP3-202ENST00000420009 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
TNFAIP3-202ENST00000420009 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
TNFAIP3-202ENST00000420009 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
TNFAIP3-202ENST00000420009 GRIN2AQ12879 1464 aa18.68■□□□□ 0.58
TNFAIP3-202ENST00000420009 ADAMTS12P58397 1594 aa18.67■□□□□ 0.58
TNFAIP3-202ENST00000420009 ERCC6L2Q5T890 1561 aa18.67■□□□□ 0.58
TNFAIP3-202ENST00000420009 NUP160Q12769 1436 aa18.65■□□□□ 0.58
TNFAIP3-202ENST00000420009 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms