RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
GPHN-210ENST00000555668 CHIC1Q5VXU3 224 aa16.71■□□□□ 0.27
GPHN-210ENST00000555668 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
GPHN-210ENST00000555668 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
GPHN-210ENST00000555668 FOXD1Q16676 465 aa13.76□□□□□ -0.21
GPHN-210ENST00000555668 PLPPR3Q6T4P5 718 aa13.46□□□□□ -0.25
GPHN-210ENST00000555668 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
GPHN-210ENST00000555668 ADRA2BP18089 450 aa13□□□□□ -0.33
GPHN-210ENST00000555668 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
GPHN-210ENST00000555668 MSH5O43196 834 aa12.83□□□□□ -0.36
GPHN-210ENST00000555668 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
GPHN-210ENST00000555668 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
GPHN-210ENST00000555668 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
GPHN-210ENST00000555668 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
GPHN-210ENST00000555668 DMRT2Q9Y5R5 561 aa11.77□□□□□ -0.53
GPHN-210ENST00000555668 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
GPHN-210ENST00000555668 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
GPHN-210ENST00000555668 HOXD11P31277 338 aaPredicted RBP11.42□□□□□ -0.58
GPHN-210ENST00000555668 RNF216Q9NWF9 866 aaPredicted RBP11.4□□□□□ -0.58
GPHN-210ENST00000555668 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
GPHN-210ENST00000555668 NPM3O75607 178 aaKnown RBP11.25□□□□□ -0.61
GPHN-210ENST00000555668 KCNA4P22459 653 aa11.22□□□□□ -0.61
GPHN-210ENST00000555668 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
GPHN-210ENST00000555668 RNF39Q9H2S5 420 aa10.95□□□□□ -0.66
GPHN-210ENST00000555668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.9□□□□□ -0.66
GPHN-210ENST00000555668 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
GPHN-210ENST00000555668 C1QBPQ07021 282 aaKnown RBP10.82□□□□□ -0.68
GPHN-210ENST00000555668 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
GPHN-210ENST00000555668 U3KPZ7 1027 aaPredicted RBP10.67□□□□□ -0.7
GPHN-210ENST00000555668 SLC4A1APQ9BWU0 796 aaKnown RBP10.65□□□□□ -0.7
GPHN-210ENST00000555668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.48□□□□□ -0.73
GPHN-210ENST00000555668 HNRNPUL2Q1KMD3 747 aaKnown RBP10.48□□□□□ -0.73
GPHN-210ENST00000555668 CAPN15O75808 1086 aa10.44□□□□□ -0.74
GPHN-210ENST00000555668 APLP2Q06481 763 aa10.44□□□□□ -0.74
GPHN-210ENST00000555668 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
GPHN-210ENST00000555668 MYCNP04198 464 aaPredicted RBP10.42□□□□□ -0.74
GPHN-210ENST00000555668 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
GPHN-210ENST00000555668 FOXD4L1Q9NU39 408 aa10.42□□□□□ -0.74
GPHN-210ENST00000555668 TRHP20396 242 aaPredicted RBP10.32□□□□□ -0.76
GPHN-210ENST00000555668 DSG3P32926 999 aa10.32□□□□□ -0.76
GPHN-210ENST00000555668 ZNF219Q9P2Y4 722 aaPredicted RBP10.32□□□□□ -0.76
GPHN-210ENST00000555668 ZBTB22O15209 634 aa10.3□□□□□ -0.76
GPHN-210ENST00000555668 ABCB7O75027 752 aa10.21□□□□□ -0.77
GPHN-210ENST00000555668 ATF5Q9Y2D1 282 aaPredicted RBP10.13□□□□□ -0.79
GPHN-210ENST00000555668 ATXN8OSP0DMR3 200 aa10.09□□□□□ -0.79
GPHN-210ENST00000555668 POLA2Q14181 598 aa10.09□□□□□ -0.79
GPHN-210ENST00000555668 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
GPHN-210ENST00000555668 EHMT2Q96KQ7 1210 aa10.01□□□□□ -0.81
GPHN-210ENST00000555668 ZBTB12Q9Y330 459 aaPredicted RBP9.92□□□□□ -0.82
GPHN-210ENST00000555668 RBM42Q9BTD8 480 aaKnown RBP9.87□□□□□ -0.83
GPHN-210ENST00000555668 FBLN2P98095 1184 aa9.77□□□□□ -0.85
GPHN-210ENST00000555668 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
GPHN-210ENST00000555668 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
GPHN-210ENST00000555668 AKT1S1Q96B36 256 aa9.68□□□□□ -0.86
GPHN-210ENST00000555668 SPDYE2BA6NHP3 402 aa9.63□□□□□ -0.87
GPHN-210ENST00000555668 SPDYE6P0CI01 402 aa9.63□□□□□ -0.87
GPHN-210ENST00000555668 SPDYE2Q495Y8 402 aa9.63□□□□□ -0.87
GPHN-210ENST00000555668 REM2Q8IYK8 340 aaPredicted RBP9.57□□□□□ -0.88
GPHN-210ENST00000555668 POTEHQ6S545 545 aa9.56□□□□□ -0.88
GPHN-210ENST00000555668 CHRDL2Q6WN34 429 aa9.55□□□□□ -0.88
GPHN-210ENST00000555668 ZNF692Q9BU19 519 aaPredicted RBP9.54□□□□□ -0.88
GPHN-210ENST00000555668 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
GPHN-210ENST00000555668 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
GPHN-210ENST00000555668 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
GPHN-210ENST00000555668 PABPN1Q86U42 306 aaKnown RBP eCLIP9.4□□□□□ -0.9
GPHN-210ENST00000555668 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
GPHN-210ENST00000555668 SPDYE4A6NLX3 237 aa9.36□□□□□ -0.91
GPHN-210ENST00000555668 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
GPHN-210ENST00000555668 FXR2P51116 673 aaKnown RBP eCLIP9.35□□□□□ -0.91
GPHN-210ENST00000555668 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
GPHN-210ENST00000555668 PRKAR2AP13861 404 aaKnown RBP9.23□□□□□ -0.93
GPHN-210ENST00000555668 STAG3Q9UJ98 1225 aa9.21□□□□□ -0.94
GPHN-210ENST00000555668 HAX1O00165 279 aa9.16□□□□□ -0.94
GPHN-210ENST00000555668 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
GPHN-210ENST00000555668 PROM2Q8N271 834 aa9.14□□□□□ -0.95
GPHN-210ENST00000555668 FKBP8Q14318 412 aa9.09□□□□□ -0.95
GPHN-210ENST00000555668 SP7Q8TDD2 431 aaPredicted RBP9.07□□□□□ -0.96
GPHN-210ENST00000555668 CREBZFQ9NS37 354 aa9.06□□□□□ -0.96
GPHN-210ENST00000555668 FARP1Q9Y4F1 1045 aaPredicted RBP9.06□□□□□ -0.96
GPHN-210ENST00000555668 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
GPHN-210ENST00000555668 EVX2Q03828 476 aa9.02□□□□□ -0.97
GPHN-210ENST00000555668 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
GPHN-210ENST00000555668 NPM1P06748 294 aaKnown RBP eCLIP8.93□□□□□ -0.98
GPHN-210ENST00000555668 MNX1P50219 401 aaPredicted RBP8.92□□□□□ -0.98
GPHN-210ENST00000555668 MIER1Q8N108 512 aa8.92□□□□□ -0.98
GPHN-210ENST00000555668 PLEKHG5O94827 1062 aa8.91□□□□□ -0.98
GPHN-210ENST00000555668 FBXO3Q9UK99 471 aa8.88□□□□□ -0.99
GPHN-210ENST00000555668 PLCD3Q8N3E9 789 aa8.87□□□□□ -0.99
GPHN-210ENST00000555668 GABBR2O75899 941 aa8.86□□□□□ -0.99
GPHN-210ENST00000555668 ZRANB1Q9UGI0 708 aa8.86□□□□□ -0.99
GPHN-210ENST00000555668 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
GPHN-210ENST00000555668 CLCN6P51797 869 aa8.82□□□□□ -1
GPHN-210ENST00000555668 ZNF579Q8NAF0 562 aaKnown RBP8.82□□□□□ -1
GPHN-210ENST00000555668 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
GPHN-210ENST00000555668 TSPYL2Q9H2G4 693 aaPredicted RBP8.75□□□□□ -1.01
GPHN-210ENST00000555668 VASPP50552 380 aaPredicted RBP8.74□□□□□ -1.01
GPHN-210ENST00000555668 PHF12Q96QT6 1004 aa8.74□□□□□ -1.01
GPHN-210ENST00000555668 RASEFQ8IZ41 740 aa8.72□□□□□ -1.01
GPHN-210ENST00000555668 NUBP1P53384 320 aa8.69□□□□□ -1.02
GPHN-210ENST00000555668 CCDC61Q9Y6R9 512 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms