RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
TNFAIP2-207ENST00000560562 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.58
TNFAIP2-207ENST00000560562 ABCC9O60706 1549 aa30.82■■■□□ 2.52
TNFAIP2-207ENST00000560562 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
TNFAIP2-207ENST00000560562 NACADO15069 1562 aa29.34■■■□□ 2.29
TNFAIP2-207ENST00000560562 DCAF8L2P0C7V8 631 aa29.15■■■□□ 2.26
TNFAIP2-207ENST00000560562 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
TNFAIP2-207ENST00000560562 UNC13AQ9UPW8 1703 aa29.01■■■□□ 2.23
TNFAIP2-207ENST00000560562 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
TNFAIP2-207ENST00000560562 DCAF1Q9Y4B6 1507 aa28.82■■■□□ 2.2
TNFAIP2-207ENST00000560562 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
TNFAIP2-207ENST00000560562 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.19
TNFAIP2-207ENST00000560562 DNAJC5BQ9UF47 199 aa28.63■■■□□ 2.17
TNFAIP2-207ENST00000560562 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
TNFAIP2-207ENST00000560562 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
TNFAIP2-207ENST00000560562 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
TNFAIP2-207ENST00000560562 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
TNFAIP2-207ENST00000560562 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
TNFAIP2-207ENST00000560562 SMARCA4P51532 1647 aa27.18■■□□□ 1.94
TNFAIP2-207ENST00000560562 NCAPD3P42695 1498 aa27.07■■□□□ 1.92
TNFAIP2-207ENST00000560562 ATAD2BQ9ULI0 1458 aa27.07■■□□□ 1.92
TNFAIP2-207ENST00000560562 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
TNFAIP2-207ENST00000560562 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
TNFAIP2-207ENST00000560562 HMGXB3Q12766 1538 aa26.95■■□□□ 1.9
TNFAIP2-207ENST00000560562 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
TNFAIP2-207ENST00000560562 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
TNFAIP2-207ENST00000560562 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
TNFAIP2-207ENST00000560562 WIZO95785 1651 aa26.66■■□□□ 1.86
TNFAIP2-207ENST00000560562 NESP48681 1621 aa26.62■■□□□ 1.85
TNFAIP2-207ENST00000560562 ERCC6Q03468 1493 aa26.52■■□□□ 1.84
TNFAIP2-207ENST00000560562 RSF1Q96T23 1441 aaPredicted RBP26.44■■□□□ 1.82
TNFAIP2-207ENST00000560562 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
TNFAIP2-207ENST00000560562 CUX2O14529 1486 aa26.37■■□□□ 1.81
TNFAIP2-207ENST00000560562 KIF21AQ7Z4S6 1674 aa26.36■■□□□ 1.81
TNFAIP2-207ENST00000560562 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
TNFAIP2-207ENST00000560562 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
TNFAIP2-207ENST00000560562 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
TNFAIP2-207ENST00000560562 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
TNFAIP2-207ENST00000560562 CFTRP13569 1480 aa26.05■■□□□ 1.76
TNFAIP2-207ENST00000560562 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
TNFAIP2-207ENST00000560562 WDR62O43379 1518 aa25.98■■□□□ 1.75
TNFAIP2-207ENST00000560562 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
TNFAIP2-207ENST00000560562 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
TNFAIP2-207ENST00000560562 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
TNFAIP2-207ENST00000560562 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
TNFAIP2-207ENST00000560562 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
TNFAIP2-207ENST00000560562 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
TNFAIP2-207ENST00000560562 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
TNFAIP2-207ENST00000560562 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
TNFAIP2-207ENST00000560562 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
TNFAIP2-207ENST00000560562 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
TNFAIP2-207ENST00000560562 ABCC8Q09428 1581 aa25.42■■□□□ 1.66
TNFAIP2-207ENST00000560562 IFT140Q96RY7 1462 aa25.41■■□□□ 1.66
TNFAIP2-207ENST00000560562 TARBP1Q13395 1621 aaKnown RBP25.36■■□□□ 1.65
TNFAIP2-207ENST00000560562 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
TNFAIP2-207ENST00000560562 POLA1P09884 1462 aaPredicted RBP25.32■■□□□ 1.64
TNFAIP2-207ENST00000560562 CUX1P39880 1505 aa25.27■■□□□ 1.64
TNFAIP2-207ENST00000560562 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
TNFAIP2-207ENST00000560562 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
TNFAIP2-207ENST00000560562 AQRO60306 1485 aaKnown RBP eCLIP25.2■■□□□ 1.628e-7■■■■■ 42.7
TNFAIP2-207ENST00000560562 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
TNFAIP2-207ENST00000560562 SOGA1O94964 1423 aa25.14■■□□□ 1.61
TNFAIP2-207ENST00000560562 CHD1O14646 1710 aa25.12■■□□□ 1.61
TNFAIP2-207ENST00000560562 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
TNFAIP2-207ENST00000560562 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
TNFAIP2-207ENST00000560562 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
TNFAIP2-207ENST00000560562 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
TNFAIP2-207ENST00000560562 PBRM1Q86U86 1689 aa24.96■■□□□ 1.59
TNFAIP2-207ENST00000560562 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
TNFAIP2-207ENST00000560562 RIMBP3CA6NJZ7 1639 aa24.96■■□□□ 1.59
TNFAIP2-207ENST00000560562 RIMBP3BA6NNM3 1639 aa24.96■■□□□ 1.59
TNFAIP2-207ENST00000560562 RIMBP3Q9UFD9 1639 aa24.96■■□□□ 1.59
TNFAIP2-207ENST00000560562 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
TNFAIP2-207ENST00000560562 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
TNFAIP2-207ENST00000560562 ABCA5Q8WWZ7 1642 aa24.93■■□□□ 1.58
TNFAIP2-207ENST00000560562 ABCA10Q8WWZ4 1543 aa24.93■■□□□ 1.58
TNFAIP2-207ENST00000560562 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
TNFAIP2-207ENST00000560562 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
TNFAIP2-207ENST00000560562 MAGI1Q96QZ7 1491 aaPredicted RBP24.87■■□□□ 1.57
TNFAIP2-207ENST00000560562 ARHGEF11O15085 1522 aa24.87■■□□□ 1.57
TNFAIP2-207ENST00000560562 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
TNFAIP2-207ENST00000560562 FBLN2P98095 1184 aa24.86■■□□□ 1.57
TNFAIP2-207ENST00000560562 SYNJ2O15056 1496 aa24.79■■□□□ 1.56
TNFAIP2-207ENST00000560562 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
TNFAIP2-207ENST00000560562 CHMP7Q8WUX9 453 aaPredicted RBP24.72■■□□□ 1.55
TNFAIP2-207ENST00000560562 ADAMTS12P58397 1594 aa24.7■■□□□ 1.54
TNFAIP2-207ENST00000560562 ARAP1Q96P48 1450 aa24.67■■□□□ 1.54
TNFAIP2-207ENST00000560562 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
TNFAIP2-207ENST00000560562 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
TNFAIP2-207ENST00000560562 CEP170Q5SW79 1584 aa24.58■■□□□ 1.52
TNFAIP2-207ENST00000560562 CYB5RLQ6IPT4 315 aa24.57■■□□□ 1.52
TNFAIP2-207ENST00000560562 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
TNFAIP2-207ENST00000560562 NUP160Q12769 1436 aa24.52■■□□□ 1.52
TNFAIP2-207ENST00000560562 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
TNFAIP2-207ENST00000560562 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
TNFAIP2-207ENST00000560562 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
TNFAIP2-207ENST00000560562 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
TNFAIP2-207ENST00000560562 IGF1RP08069 1367 aa24.35■■□□□ 1.49
TNFAIP2-207ENST00000560562 CUL7Q14999 1698 aa24.35■■□□□ 1.49
TNFAIP2-207ENST00000560562 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms