RNA–Protein interactions for RNA: ENST00000586552.5

LINC00479-203, long intergenic non-protein coding RNA 479, humanhuman

TSL 1 (best)

Gene LINC00479, Length 292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-203ENST00000586552 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
LINC00479-203ENST00000586552 ABCC9O60706 1549 aa19.42■□□□□ 0.7
LINC00479-203ENST00000586552 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
LINC00479-203ENST00000586552 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
LINC00479-203ENST00000586552 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
LINC00479-203ENST00000586552 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
LINC00479-203ENST00000586552 NACADO15069 1562 aa18.24■□□□□ 0.51
LINC00479-203ENST00000586552 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC00479-203ENST00000586552 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
LINC00479-203ENST00000586552 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
LINC00479-203ENST00000586552 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.45
LINC00479-203ENST00000586552 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
LINC00479-203ENST00000586552 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
LINC00479-203ENST00000586552 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
LINC00479-203ENST00000586552 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.41
LINC00479-203ENST00000586552 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
LINC00479-203ENST00000586552 CECR2Q9BXF3 1484 aa17.5■□□□□ 0.39
LINC00479-203ENST00000586552 EIF4G1Q04637 1599 aaKnown RBP17.45■□□□□ 0.38
LINC00479-203ENST00000586552 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
LINC00479-203ENST00000586552 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
LINC00479-203ENST00000586552 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
LINC00479-203ENST00000586552 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
LINC00479-203ENST00000586552 CUX2O14529 1486 aa16.74■□□□□ 0.27
LINC00479-203ENST00000586552 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
LINC00479-203ENST00000586552 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
LINC00479-203ENST00000586552 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
LINC00479-203ENST00000586552 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
LINC00479-203ENST00000586552 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
LINC00479-203ENST00000586552 NESP48681 1621 aa16.63■□□□□ 0.25
LINC00479-203ENST00000586552 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
LINC00479-203ENST00000586552 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
LINC00479-203ENST00000586552 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
LINC00479-203ENST00000586552 THOC2Q8NI27 1593 aaKnown RBP16.46■□□□□ 0.23
LINC00479-203ENST00000586552 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
LINC00479-203ENST00000586552 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
LINC00479-203ENST00000586552 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
LINC00479-203ENST00000586552 WIZO95785 1651 aa16.32■□□□□ 0.2
LINC00479-203ENST00000586552 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
LINC00479-203ENST00000586552 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
LINC00479-203ENST00000586552 WDR62O43379 1518 aa16.2■□□□□ 0.18
LINC00479-203ENST00000586552 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
LINC00479-203ENST00000586552 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
LINC00479-203ENST00000586552 RSF1Q96T23 1441 aaPredicted RBP16.13■□□□□ 0.17
LINC00479-203ENST00000586552 CFTRP13569 1480 aa16.11■□□□□ 0.17
LINC00479-203ENST00000586552 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
LINC00479-203ENST00000586552 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
LINC00479-203ENST00000586552 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
LINC00479-203ENST00000586552 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
LINC00479-203ENST00000586552 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
LINC00479-203ENST00000586552 IFT140Q96RY7 1462 aa15.86■□□□□ 0.13
LINC00479-203ENST00000586552 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
LINC00479-203ENST00000586552 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
LINC00479-203ENST00000586552 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
LINC00479-203ENST00000586552 RIMBP3CA6NJZ7 1639 aa15.78■□□□□ 0.12
LINC00479-203ENST00000586552 RIMBP3BA6NNM3 1639 aa15.78■□□□□ 0.12
LINC00479-203ENST00000586552 RIMBP3Q9UFD9 1639 aa15.78■□□□□ 0.12
LINC00479-203ENST00000586552 DNMBPQ6XZF7 1577 aa15.77■□□□□ 0.11
LINC00479-203ENST00000586552 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
LINC00479-203ENST00000586552 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
LINC00479-203ENST00000586552 FBLN2P98095 1184 aa15.71■□□□□ 0.11
LINC00479-203ENST00000586552 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.1
LINC00479-203ENST00000586552 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
LINC00479-203ENST00000586552 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
LINC00479-203ENST00000586552 CHD1O14646 1710 aa15.67■□□□□ 0.1
LINC00479-203ENST00000586552 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
LINC00479-203ENST00000586552 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
LINC00479-203ENST00000586552 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
LINC00479-203ENST00000586552 SOGA1O94964 1423 aa15.61■□□□□ 0.09
LINC00479-203ENST00000586552 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
LINC00479-203ENST00000586552 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
LINC00479-203ENST00000586552 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
LINC00479-203ENST00000586552 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
LINC00479-203ENST00000586552 CHMP7Q8WUX9 453 aaPredicted RBP15.54■□□□□ 0.08
LINC00479-203ENST00000586552 CUX1P39880 1505 aa15.52■□□□□ 0.07
LINC00479-203ENST00000586552 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
LINC00479-203ENST00000586552 GRIN2BQ13224 1484 aa15.48■□□□□ 0.07
LINC00479-203ENST00000586552 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
LINC00479-203ENST00000586552 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
LINC00479-203ENST00000586552 CLASP1Q7Z460 1538 aa15.45■□□□□ 0.06
LINC00479-203ENST00000586552 SUPT5HO00267 1087 aaKnown RBP15.44■□□□□ 0.06
LINC00479-203ENST00000586552 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
LINC00479-203ENST00000586552 GAPVD1Q14C86 1478 aa15.42■□□□□ 0.06
LINC00479-203ENST00000586552 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
LINC00479-203ENST00000586552 ABCA10Q8WWZ4 1543 aa15.36■□□□□ 0.05
LINC00479-203ENST00000586552 ABCA5Q8WWZ7 1642 aa15.34■□□□□ 0.05
LINC00479-203ENST00000586552 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
LINC00479-203ENST00000586552 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
LINC00479-203ENST00000586552 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
LINC00479-203ENST00000586552 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
LINC00479-203ENST00000586552 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
LINC00479-203ENST00000586552 ERCC6L2Q5T890 1561 aa15.23■□□□□ 0.03
LINC00479-203ENST00000586552 FHAD1B1AJZ9 1412 aa15.22■□□□□ 0.03
LINC00479-203ENST00000586552 CEP170Q5SW79 1584 aa15.21■□□□□ 0.03
LINC00479-203ENST00000586552 NUP160Q12769 1436 aa15.21■□□□□ 0.03
LINC00479-203ENST00000586552 AEBP2Q6ZN18 517 aaPredicted RBP15.21■□□□□ 0.03
LINC00479-203ENST00000586552 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
LINC00479-203ENST00000586552 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
LINC00479-203ENST00000586552 PRG4Q92954 1404 aaPredicted RBP15.11■□□□□ 0.01
LINC00479-203ENST00000586552 JPH4Q96JJ6 628 aa15.1■□□□□ 0.01
LINC00479-203ENST00000586552 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 224.5 ms