RNA–Protein interactions for RNA: ENST00000572622.1

RNF213-214, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-214ENST00000572622 NISCHQ9Y2I1 1504 aa29.9■■■□□ 2.38
RNF213-214ENST00000572622 CCDC180Q9P1Z9 1646 aa26.26■■□□□ 1.79
RNF213-214ENST00000572622 ABCC9O60706 1549 aa25.13■■□□□ 1.61
RNF213-214ENST00000572622 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
RNF213-214ENST00000572622 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
RNF213-214ENST00000572622 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
RNF213-214ENST00000572622 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
RNF213-214ENST00000572622 NACADO15069 1562 aa24.56■■□□□ 1.52
RNF213-214ENST00000572622 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
RNF213-214ENST00000572622 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
RNF213-214ENST00000572622 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
RNF213-214ENST00000572622 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
RNF213-214ENST00000572622 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
RNF213-214ENST00000572622 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
RNF213-214ENST00000572622 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
RNF213-214ENST00000572622 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
RNF213-214ENST00000572622 MROH2BQ7Z745 1585 aa23.06■■□□□ 1.28
RNF213-214ENST00000572622 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
RNF213-214ENST00000572622 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
RNF213-214ENST00000572622 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
RNF213-214ENST00000572622 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
RNF213-214ENST00000572622 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
RNF213-214ENST00000572622 WIZO95785 1651 aa22.81■■□□□ 1.24
RNF213-214ENST00000572622 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
RNF213-214ENST00000572622 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
RNF213-214ENST00000572622 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
RNF213-214ENST00000572622 NCAPD3P42695 1498 aa22.7■■□□□ 1.22
RNF213-214ENST00000572622 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
RNF213-214ENST00000572622 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
RNF213-214ENST00000572622 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
RNF213-214ENST00000572622 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
RNF213-214ENST00000572622 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
RNF213-214ENST00000572622 CFTRP13569 1480 aa22.06■■□□□ 1.12
RNF213-214ENST00000572622 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
RNF213-214ENST00000572622 NESP48681 1621 aa21.96■■□□□ 1.11
RNF213-214ENST00000572622 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
RNF213-214ENST00000572622 PRDM2Q13029 1718 aa21.86■■□□□ 1.09
RNF213-214ENST00000572622 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
RNF213-214ENST00000572622 PDS5BQ9NTI5 1447 aa21.78■■□□□ 1.08
RNF213-214ENST00000572622 CHIC1Q5VXU3 224 aa21.72■■□□□ 1.07
RNF213-214ENST00000572622 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
RNF213-214ENST00000572622 KIF21AQ7Z4S6 1674 aa21.67■■□□□ 1.06
RNF213-214ENST00000572622 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
RNF213-214ENST00000572622 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
RNF213-214ENST00000572622 CUX1P39880 1505 aa21.6■■□□□ 1.05
RNF213-214ENST00000572622 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
RNF213-214ENST00000572622 ERCC6Q03468 1493 aa21.56■■□□□ 1.04
RNF213-214ENST00000572622 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
RNF213-214ENST00000572622 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
RNF213-214ENST00000572622 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
RNF213-214ENST00000572622 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
RNF213-214ENST00000572622 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
RNF213-214ENST00000572622 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
RNF213-214ENST00000572622 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
RNF213-214ENST00000572622 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
RNF213-214ENST00000572622 WDR62O43379 1518 aa21.46■■□□□ 1.03
RNF213-214ENST00000572622 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
RNF213-214ENST00000572622 POLA1P09884 1462 aaPredicted RBP21.38■■□□□ 1.01
RNF213-214ENST00000572622 CUX2O14529 1486 aa21.31■■□□□ 1
RNF213-214ENST00000572622 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
RNF213-214ENST00000572622 SOGA1O94964 1423 aa21.28■■□□□ 1
RNF213-214ENST00000572622 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
RNF213-214ENST00000572622 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
RNF213-214ENST00000572622 IFT140Q96RY7 1462 aa21.21■□□□□ 0.99
RNF213-214ENST00000572622 WDR97A6NE52 1622 aa21.2■□□□□ 0.98
RNF213-214ENST00000572622 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
RNF213-214ENST00000572622 EEA1Q15075 1411 aa21.13■□□□□ 0.97
RNF213-214ENST00000572622 KIF27Q86VH2 1401 aa21.13■□□□□ 0.97
RNF213-214ENST00000572622 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
RNF213-214ENST00000572622 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
RNF213-214ENST00000572622 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
RNF213-214ENST00000572622 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
RNF213-214ENST00000572622 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.965e-8■■■■□ 22.3
RNF213-214ENST00000572622 GAPVD1Q14C86 1478 aa21.04■□□□□ 0.96
RNF213-214ENST00000572622 IGF1RP08069 1367 aa21.03■□□□□ 0.96
RNF213-214ENST00000572622 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
RNF213-214ENST00000572622 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
RNF213-214ENST00000572622 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
RNF213-214ENST00000572622 GRIN2BQ13224 1484 aa20.95■□□□□ 0.94
RNF213-214ENST00000572622 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
RNF213-214ENST00000572622 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
RNF213-214ENST00000572622 KIF21BO75037 1637 aa20.89■□□□□ 0.93
RNF213-214ENST00000572622 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
RNF213-214ENST00000572622 CUL7Q14999 1698 aa20.86■□□□□ 0.93
RNF213-214ENST00000572622 SNAPC4Q5SXM2 1469 aa20.85■□□□□ 0.93
RNF213-214ENST00000572622 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
RNF213-214ENST00000572622 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
RNF213-214ENST00000572622 MAGI1Q96QZ7 1491 aaPredicted RBP20.82■□□□□ 0.92
RNF213-214ENST00000572622 RAPGEF2Q9Y4G8 1499 aa20.82■□□□□ 0.92
RNF213-214ENST00000572622 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
RNF213-214ENST00000572622 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
RNF213-214ENST00000572622 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
RNF213-214ENST00000572622 EHMT2Q96KQ7 1210 aa20.71■□□□□ 0.91
RNF213-214ENST00000572622 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
RNF213-214ENST00000572622 TNIKQ9UKE5 1360 aa20.68■□□□□ 0.9
RNF213-214ENST00000572622 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
RNF213-214ENST00000572622 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.89
RNF213-214ENST00000572622 NUP160Q12769 1436 aa20.61■□□□□ 0.89
RNF213-214ENST00000572622 CHD1O14646 1710 aa20.6■□□□□ 0.89
RNF213-214ENST00000572622 FBLN2P98095 1184 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms