RNA–Protein interactions for RNA: ENST00000513611.5

APBB2-227, Transcript of amyloid beta precursor protein binding family B member 2, humanhuman

TSL 5

Gene APBB2, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB2-227ENST00000513611 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.69
APBB2-227ENST00000513611 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
APBB2-227ENST00000513611 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
APBB2-227ENST00000513611 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
APBB2-227ENST00000513611 NACADO15069 1562 aa16.3■□□□□ 0.2
APBB2-227ENST00000513611 ABCC9O60706 1549 aa16.25■□□□□ 0.19
APBB2-227ENST00000513611 RB1CC1Q8TDY2 1594 aa16.19■□□□□ 0.18
APBB2-227ENST00000513611 ZCCHC6Q5VYS8 1495 aaKnown RBP16.17■□□□□ 0.18
APBB2-227ENST00000513611 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
APBB2-227ENST00000513611 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.11
APBB2-227ENST00000513611 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
APBB2-227ENST00000513611 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
APBB2-227ENST00000513611 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
APBB2-227ENST00000513611 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
APBB2-227ENST00000513611 PEG3Q9GZU2 1588 aa15.1■□□□□ 0.01
APBB2-227ENST00000513611 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
APBB2-227ENST00000513611 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
APBB2-227ENST00000513611 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
APBB2-227ENST00000513611 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
APBB2-227ENST00000513611 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
APBB2-227ENST00000513611 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
APBB2-227ENST00000513611 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
APBB2-227ENST00000513611 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
APBB2-227ENST00000513611 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.04
APBB2-227ENST00000513611 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
APBB2-227ENST00000513611 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
APBB2-227ENST00000513611 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
APBB2-227ENST00000513611 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
APBB2-227ENST00000513611 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
APBB2-227ENST00000513611 LAMC3Q9Y6N6 1575 aa14.58□□□□□ -0.08
APBB2-227ENST00000513611 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
APBB2-227ENST00000513611 WIZO95785 1651 aa14.56□□□□□ -0.08
APBB2-227ENST00000513611 CFTRP13569 1480 aa14.37□□□□□ -0.11
APBB2-227ENST00000513611 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
APBB2-227ENST00000513611 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
APBB2-227ENST00000513611 CUX2O14529 1486 aa14.32□□□□□ -0.12
APBB2-227ENST00000513611 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.13
APBB2-227ENST00000513611 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
APBB2-227ENST00000513611 THOC2Q8NI27 1593 aaKnown RBP14.25□□□□□ -0.13
APBB2-227ENST00000513611 WDR62O43379 1518 aa14.22□□□□□ -0.13
APBB2-227ENST00000513611 WDR97A6NE52 1622 aa14.22□□□□□ -0.13
APBB2-227ENST00000513611 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
APBB2-227ENST00000513611 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
APBB2-227ENST00000513611 CEP164Q9UPV0 1460 aa14.14□□□□□ -0.15
APBB2-227ENST00000513611 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
APBB2-227ENST00000513611 NESP48681 1621 aa14.09□□□□□ -0.15
APBB2-227ENST00000513611 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
APBB2-227ENST00000513611 DNMBPQ6XZF7 1577 aa14.08□□□□□ -0.16
APBB2-227ENST00000513611 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
APBB2-227ENST00000513611 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.16
APBB2-227ENST00000513611 URB2Q14146 1524 aaKnown RBP13.97□□□□□ -0.17
APBB2-227ENST00000513611 IFT140Q96RY7 1462 aa13.96□□□□□ -0.17
APBB2-227ENST00000513611 TOPBP1Q92547 1522 aa13.96□□□□□ -0.18
APBB2-227ENST00000513611 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
APBB2-227ENST00000513611 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
APBB2-227ENST00000513611 CUX1P39880 1505 aa13.85□□□□□ -0.19
APBB2-227ENST00000513611 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
APBB2-227ENST00000513611 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
APBB2-227ENST00000513611 ABCA5Q8WWZ7 1642 aa13.78□□□□□ -0.2
APBB2-227ENST00000513611 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
APBB2-227ENST00000513611 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
APBB2-227ENST00000513611 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
APBB2-227ENST00000513611 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
APBB2-227ENST00000513611 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
APBB2-227ENST00000513611 SYNJ1O43426 1573 aa13.72□□□□□ -0.21
APBB2-227ENST00000513611 MYT1Q01538 1121 aa13.72□□□□□ -0.21
APBB2-227ENST00000513611 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
APBB2-227ENST00000513611 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
APBB2-227ENST00000513611 SOGA1O94964 1423 aa13.7□□□□□ -0.22
APBB2-227ENST00000513611 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
APBB2-227ENST00000513611 CUL7Q14999 1698 aa13.66□□□□□ -0.22
APBB2-227ENST00000513611 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
APBB2-227ENST00000513611 ADAMTS12P58397 1594 aa13.59□□□□□ -0.23
APBB2-227ENST00000513611 EEA1Q15075 1411 aa13.59□□□□□ -0.23
APBB2-227ENST00000513611 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
APBB2-227ENST00000513611 ZNF608Q9ULD9 1512 aaPredicted RBP13.56□□□□□ -0.24
APBB2-227ENST00000513611 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
APBB2-227ENST00000513611 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
APBB2-227ENST00000513611 CHD1O14646 1710 aa13.54□□□□□ -0.24
APBB2-227ENST00000513611 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
APBB2-227ENST00000513611 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
APBB2-227ENST00000513611 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.24
APBB2-227ENST00000513611 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
APBB2-227ENST00000513611 NUP160Q12769 1436 aa13.48□□□□□ -0.25
APBB2-227ENST00000513611 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
APBB2-227ENST00000513611 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.26
APBB2-227ENST00000513611 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
APBB2-227ENST00000513611 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
APBB2-227ENST00000513611 IGF1RP08069 1367 aa13.4□□□□□ -0.26
APBB2-227ENST00000513611 KIF21BO75037 1637 aa13.39□□□□□ -0.27
APBB2-227ENST00000513611 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
APBB2-227ENST00000513611 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
APBB2-227ENST00000513611 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
APBB2-227ENST00000513611 PRXQ9BXM0 1461 aa13.37□□□□□ -0.27
APBB2-227ENST00000513611 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
APBB2-227ENST00000513611 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
APBB2-227ENST00000513611 CEP170Q5SW79 1584 aa13.35□□□□□ -0.27
APBB2-227ENST00000513611 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
APBB2-227ENST00000513611 UGGT2Q9NYU1 1516 aa13.31□□□□□ -0.28
APBB2-227ENST00000513611 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms