RNA–Protein interactions for RNA: ENST00000553925.1

SEC23A-205, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 3

Gene SEC23A, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-205ENST00000553925 AEBP2Q6ZN18 517 aaPredicted RBP24.6■■□□□ 1.53
SEC23A-205ENST00000553925 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
SEC23A-205ENST00000553925 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
SEC23A-205ENST00000553925 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
SEC23A-205ENST00000553925 FOXD1Q16676 465 aa19.62■□□□□ 0.73
SEC23A-205ENST00000553925 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
SEC23A-205ENST00000553925 MSH5O43196 834 aa18.43■□□□□ 0.54
SEC23A-205ENST00000553925 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
SEC23A-205ENST00000553925 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
SEC23A-205ENST00000553925 ADRA2BP18089 450 aa18.22■□□□□ 0.51
SEC23A-205ENST00000553925 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
SEC23A-205ENST00000553925 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
SEC23A-205ENST00000553925 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
SEC23A-205ENST00000553925 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
SEC23A-205ENST00000553925 PPP4R3CPQ6ZMV5 832 aa16.23■□□□□ 0.19
SEC23A-205ENST00000553925 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
SEC23A-205ENST00000553925 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
SEC23A-205ENST00000553925 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
SEC23A-205ENST00000553925 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
SEC23A-205ENST00000553925 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
SEC23A-205ENST00000553925 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
SEC23A-205ENST00000553925 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
SEC23A-205ENST00000553925 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
SEC23A-205ENST00000553925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
SEC23A-205ENST00000553925 NPM3O75607 178 aaKnown RBP15.31■□□□□ 0.04
SEC23A-205ENST00000553925 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
SEC23A-205ENST00000553925 KCNA4P22459 653 aa14.9□□□□□ -0.02
SEC23A-205ENST00000553925 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
SEC23A-205ENST00000553925 CAPN15O75808 1086 aa14.83□□□□□ -0.04
SEC23A-205ENST00000553925 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
SEC23A-205ENST00000553925 DSG3P32926 999 aa14.65□□□□□ -0.06
SEC23A-205ENST00000553925 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
SEC23A-205ENST00000553925 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
SEC23A-205ENST00000553925 APLP2Q06481 763 aa14.51□□□□□ -0.09
SEC23A-205ENST00000553925 ABCB7O75027 752 aa14.49□□□□□ -0.09
SEC23A-205ENST00000553925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
SEC23A-205ENST00000553925 HNRNPUL2Q1KMD3 747 aaKnown RBP14.43□□□□□ -0.1
SEC23A-205ENST00000553925 ZNF219Q9P2Y4 722 aaPredicted RBP14.43□□□□□ -0.1
SEC23A-205ENST00000553925 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
SEC23A-205ENST00000553925 POTEHQ6S545 545 aa14.31□□□□□ -0.12
SEC23A-205ENST00000553925 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
SEC23A-205ENST00000553925 POLA2Q14181 598 aa14.07□□□□□ -0.16
SEC23A-205ENST00000553925 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
SEC23A-205ENST00000553925 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
SEC23A-205ENST00000553925 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
SEC23A-205ENST00000553925 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
SEC23A-205ENST00000553925 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
SEC23A-205ENST00000553925 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
SEC23A-205ENST00000553925 ZBTB22O15209 634 aa13.66□□□□□ -0.22
SEC23A-205ENST00000553925 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
SEC23A-205ENST00000553925 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
SEC23A-205ENST00000553925 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-205ENST00000553925 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
SEC23A-205ENST00000553925 PIP4P2Q8N4L2 257 aa13.42□□□□□ -0.26
SEC23A-205ENST00000553925 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
SEC23A-205ENST00000553925 FBLN2P98095 1184 aa13.4□□□□□ -0.26
SEC23A-205ENST00000553925 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
SEC23A-205ENST00000553925 HAX1O00165 279 aa13.3□□□□□ -0.28
SEC23A-205ENST00000553925 SPDYE2BA6NHP3 402 aa13.28□□□□□ -0.28
SEC23A-205ENST00000553925 SPDYE6P0CI01 402 aa13.28□□□□□ -0.28
SEC23A-205ENST00000553925 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
SEC23A-205ENST00000553925 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC23A-205ENST00000553925 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
SEC23A-205ENST00000553925 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
SEC23A-205ENST00000553925 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
SEC23A-205ENST00000553925 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
SEC23A-205ENST00000553925 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
SEC23A-205ENST00000553925 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
SEC23A-205ENST00000553925 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
SEC23A-205ENST00000553925 EVX2Q03828 476 aa13.03□□□□□ -0.32
SEC23A-205ENST00000553925 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
SEC23A-205ENST00000553925 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
SEC23A-205ENST00000553925 PRR29P0C7W0 189 aa12.92□□□□□ -0.34
SEC23A-205ENST00000553925 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
SEC23A-205ENST00000553925 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
SEC23A-205ENST00000553925 GABBR2O75899 941 aa12.74□□□□□ -0.37
SEC23A-205ENST00000553925 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
SEC23A-205ENST00000553925 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
SEC23A-205ENST00000553925 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
SEC23A-205ENST00000553925 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
SEC23A-205ENST00000553925 LHX8Q68G74 356 aa12.53□□□□□ -0.4
SEC23A-205ENST00000553925 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
SEC23A-205ENST00000553925 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
SEC23A-205ENST00000553925 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
SEC23A-205ENST00000553925 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
SEC23A-205ENST00000553925 CLCN6P51797 869 aa12.39□□□□□ -0.43
SEC23A-205ENST00000553925 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
SEC23A-205ENST00000553925 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
SEC23A-205ENST00000553925 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
SEC23A-205ENST00000553925 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
SEC23A-205ENST00000553925 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
SEC23A-205ENST00000553925 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
SEC23A-205ENST00000553925 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
SEC23A-205ENST00000553925 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
SEC23A-205ENST00000553925 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
SEC23A-205ENST00000553925 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
SEC23A-205ENST00000553925 MIER1Q8N108 512 aa12.05□□□□□ -0.48
SEC23A-205ENST00000553925 PROM2Q8N271 834 aa12.05□□□□□ -0.48
SEC23A-205ENST00000553925 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
SEC23A-205ENST00000553925 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 222.8 ms