RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 AEBP2Q6ZN18 517 aaPredicted RBP25.6■■□□□ 1.69
CACUL1-205ENST00000490610 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
CACUL1-205ENST00000490610 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
CACUL1-205ENST00000490610 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
CACUL1-205ENST00000490610 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
CACUL1-205ENST00000490610 FOXD1Q16676 465 aa20.29■□□□□ 0.84
CACUL1-205ENST00000490610 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
CACUL1-205ENST00000490610 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
CACUL1-205ENST00000490610 ADRA2BP18089 450 aa19.14■□□□□ 0.65
CACUL1-205ENST00000490610 PIAS4Q8N2W9 510 aaPredicted RBP19.04■□□□□ 0.64
CACUL1-205ENST00000490610 MSH5O43196 834 aa18.89■□□□□ 0.61
CACUL1-205ENST00000490610 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
CACUL1-205ENST00000490610 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
CACUL1-205ENST00000490610 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
CACUL1-205ENST00000490610 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
CACUL1-205ENST00000490610 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
CACUL1-205ENST00000490610 ZCCHC6Q5VYS8 1495 aaKnown RBP17.42■□□□□ 0.38
CACUL1-205ENST00000490610 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
CACUL1-205ENST00000490610 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
CACUL1-205ENST00000490610 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
CACUL1-205ENST00000490610 KCNA4P22459 653 aa17.1■□□□□ 0.33
CACUL1-205ENST00000490610 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
CACUL1-205ENST00000490610 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
CACUL1-205ENST00000490610 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
CACUL1-205ENST00000490610 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
CACUL1-205ENST00000490610 ABCC9O60706 1549 aa16.86■□□□□ 0.29
CACUL1-205ENST00000490610 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
CACUL1-205ENST00000490610 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
CACUL1-205ENST00000490610 NACADO15069 1562 aa16.8■□□□□ 0.28
CACUL1-205ENST00000490610 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
CACUL1-205ENST00000490610 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
CACUL1-205ENST00000490610 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
CACUL1-205ENST00000490610 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
CACUL1-205ENST00000490610 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
CACUL1-205ENST00000490610 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
CACUL1-205ENST00000490610 SUPT5HO00267 1087 aaKnown RBP16.24■□□□□ 0.19
CACUL1-205ENST00000490610 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
CACUL1-205ENST00000490610 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
CACUL1-205ENST00000490610 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
CACUL1-205ENST00000490610 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
CACUL1-205ENST00000490610 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
CACUL1-205ENST00000490610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
CACUL1-205ENST00000490610 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
CACUL1-205ENST00000490610 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
CACUL1-205ENST00000490610 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
CACUL1-205ENST00000490610 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
CACUL1-205ENST00000490610 C1QBPQ07021 282 aaKnown RBP15.93■□□□□ 0.14
CACUL1-205ENST00000490610 SMARCA4P51532 1647 aa15.91■□□□□ 0.14
CACUL1-205ENST00000490610 WIZO95785 1651 aa15.85■□□□□ 0.13
CACUL1-205ENST00000490610 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
CACUL1-205ENST00000490610 ZBTB22O15209 634 aa15.76■□□□□ 0.11
CACUL1-205ENST00000490610 FOXD4L1Q9NU39 408 aa15.74■□□□□ 0.11
CACUL1-205ENST00000490610 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
CACUL1-205ENST00000490610 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
CACUL1-205ENST00000490610 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
CACUL1-205ENST00000490610 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
CACUL1-205ENST00000490610 SMARCA2P51531 1590 aa15.65■□□□□ 0.1
CACUL1-205ENST00000490610 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
CACUL1-205ENST00000490610 MYCNP04198 464 aaPredicted RBP15.57■□□□□ 0.08
CACUL1-205ENST00000490610 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
CACUL1-205ENST00000490610 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
CACUL1-205ENST00000490610 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
CACUL1-205ENST00000490610 CCDC88BA6NC98 1476 aa15.5■□□□□ 0.07
CACUL1-205ENST00000490610 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
CACUL1-205ENST00000490610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
CACUL1-205ENST00000490610 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
CACUL1-205ENST00000490610 NCAPD3P42695 1498 aa15.43■□□□□ 0.06
CACUL1-205ENST00000490610 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
CACUL1-205ENST00000490610 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
CACUL1-205ENST00000490610 CAPN15O75808 1086 aa15.38■□□□□ 0.05
CACUL1-205ENST00000490610 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
CACUL1-205ENST00000490610 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
CACUL1-205ENST00000490610 APLP2Q06481 763 aa15.29■□□□□ 0.04
CACUL1-205ENST00000490610 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
CACUL1-205ENST00000490610 DSG3P32926 999 aa15.21■□□□□ 0.03
CACUL1-205ENST00000490610 ATF5Q9Y2D1 282 aaPredicted RBP15.21■□□□□ 0.03
CACUL1-205ENST00000490610 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
CACUL1-205ENST00000490610 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
CACUL1-205ENST00000490610 ATXN8OSP0DMR3 200 aa15.19■□□□□ 0.02
CACUL1-205ENST00000490610 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
CACUL1-205ENST00000490610 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
CACUL1-205ENST00000490610 CFTRP13569 1480 aa15.12■□□□□ 0.01
CACUL1-205ENST00000490610 SYNJ1O43426 1573 aa15.07■□□□□ 0
CACUL1-205ENST00000490610 EEA1Q15075 1411 aa15.05■□□□□ -0
CACUL1-205ENST00000490610 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ -0
CACUL1-205ENST00000490610 TOP2BQ02880 1626 aa15.04■□□□□ -0
CACUL1-205ENST00000490610 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
CACUL1-205ENST00000490610 ABCB7O75027 752 aa15.03■□□□□ -0
CACUL1-205ENST00000490610 LOC105371045A0A1W2PR82 267 aa14.96□□□□□ -0.01
CACUL1-205ENST00000490610 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
CACUL1-205ENST00000490610 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
CACUL1-205ENST00000490610 CUX1P39880 1505 aa14.92□□□□□ -0.02
CACUL1-205ENST00000490610 SOGA1O94964 1423 aa14.91□□□□□ -0.02
CACUL1-205ENST00000490610 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
CACUL1-205ENST00000490610 POLA2Q14181 598 aa14.88□□□□□ -0.03
CACUL1-205ENST00000490610 KIF21BO75037 1637 aa14.84□□□□□ -0.03
CACUL1-205ENST00000490610 DNMBPQ6XZF7 1577 aa14.82□□□□□ -0.04
CACUL1-205ENST00000490610 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
CACUL1-205ENST00000490610 NESP48681 1621 aa14.81□□□□□ -0.04
CACUL1-205ENST00000490610 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms