RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
CASC3-209ENST00000583902 NISCHQ9Y2I1 1504 aa21.39■■□□□ 1.02
CASC3-209ENST00000583902 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
CASC3-209ENST00000583902 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
CASC3-209ENST00000583902 SENP3Q9H4L4 574 aaPredicted RBP18.46■□□□□ 0.55
CASC3-209ENST00000583902 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
CASC3-209ENST00000583902 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
CASC3-209ENST00000583902 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
CASC3-209ENST00000583902 ABCC9O60706 1549 aa17.82■□□□□ 0.44
CASC3-209ENST00000583902 MYO15BQ96JP2 1530 aa17.8■□□□□ 0.44
CASC3-209ENST00000583902 NACADO15069 1562 aa17.67■□□□□ 0.42
CASC3-209ENST00000583902 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
CASC3-209ENST00000583902 DCAF8L2P0C7V8 631 aa17.54■□□□□ 0.4
CASC3-209ENST00000583902 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
CASC3-209ENST00000583902 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
CASC3-209ENST00000583902 FOXD1Q16676 465 aa17.04■□□□□ 0.32
CASC3-209ENST00000583902 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
CASC3-209ENST00000583902 BICRAQ9NZM4 1560 aa16.87■□□□□ 0.29
CASC3-209ENST00000583902 PLPPR3Q6T4P5 718 aa16.72■□□□□ 0.27
CASC3-209ENST00000583902 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
CASC3-209ENST00000583902 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
CASC3-209ENST00000583902 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
CASC3-209ENST00000583902 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
CASC3-209ENST00000583902 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
CASC3-209ENST00000583902 EIF4G1Q04637 1599 aaKnown RBP16.43■□□□□ 0.22
CASC3-209ENST00000583902 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
CASC3-209ENST00000583902 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
CASC3-209ENST00000583902 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
CASC3-209ENST00000583902 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
CASC3-209ENST00000583902 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
CASC3-209ENST00000583902 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
CASC3-209ENST00000583902 WIZO95785 1651 aa16.26■□□□□ 0.19
CASC3-209ENST00000583902 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
CASC3-209ENST00000583902 CC2D2AQ9P2K1 1620 aa16.23■□□□□ 0.19
CASC3-209ENST00000583902 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.19
CASC3-209ENST00000583902 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
CASC3-209ENST00000583902 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
CASC3-209ENST00000583902 MSH5O43196 834 aa16.03■□□□□ 0.16
CASC3-209ENST00000583902 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
CASC3-209ENST00000583902 ADRA2BP18089 450 aa16.02■□□□□ 0.16
CASC3-209ENST00000583902 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.14
CASC3-209ENST00000583902 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
CASC3-209ENST00000583902 CFTRP13569 1480 aa15.8■□□□□ 0.12
CASC3-209ENST00000583902 CADPSQ9ULU8 1353 aa15.78■□□□□ 0.12
CASC3-209ENST00000583902 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
CASC3-209ENST00000583902 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
CASC3-209ENST00000583902 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
CASC3-209ENST00000583902 FANCD2Q9BXW9 1451 aa15.56■□□□□ 0.08
CASC3-209ENST00000583902 ABCC8Q09428 1581 aa15.55■□□□□ 0.08
CASC3-209ENST00000583902 NESP48681 1621 aa15.54■□□□□ 0.08
CASC3-209ENST00000583902 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.08
CASC3-209ENST00000583902 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
CASC3-209ENST00000583902 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
CASC3-209ENST00000583902 TOP2BQ02880 1626 aa15.46■□□□□ 0.06
CASC3-209ENST00000583902 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
CASC3-209ENST00000583902 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
CASC3-209ENST00000583902 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
CASC3-209ENST00000583902 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
CASC3-209ENST00000583902 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
CASC3-209ENST00000583902 CUX1P39880 1505 aa15.38■□□□□ 0.05
CASC3-209ENST00000583902 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
CASC3-209ENST00000583902 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
CASC3-209ENST00000583902 WDR62O43379 1518 aa15.35■□□□□ 0.05
CASC3-209ENST00000583902 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.05
CASC3-209ENST00000583902 EEA1Q15075 1411 aa15.32■□□□□ 0.04
CASC3-209ENST00000583902 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
CASC3-209ENST00000583902 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.04
CASC3-209ENST00000583902 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
CASC3-209ENST00000583902 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
CASC3-209ENST00000583902 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
CASC3-209ENST00000583902 SOGA1O94964 1423 aa15.22■□□□□ 0.03
CASC3-209ENST00000583902 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
CASC3-209ENST00000583902 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
CASC3-209ENST00000583902 CUX2O14529 1486 aa15.18■□□□□ 0.02
CASC3-209ENST00000583902 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
CASC3-209ENST00000583902 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
CASC3-209ENST00000583902 RAD54L2Q9Y4B4 1467 aa15.11■□□□□ 0.01
CASC3-209ENST00000583902 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
CASC3-209ENST00000583902 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
CASC3-209ENST00000583902 ERICH3Q5RHP9 1530 aa15.09■□□□□ 0.01
CASC3-209ENST00000583902 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
CASC3-209ENST00000583902 CUL7Q14999 1698 aa15.05■□□□□ -0
CASC3-209ENST00000583902 KIF21BO75037 1637 aa15.03■□□□□ -0
CASC3-209ENST00000583902 GRIN2BQ13224 1484 aa15.02■□□□□ -0
CASC3-209ENST00000583902 IGF1RP08069 1367 aa15.02■□□□□ -0
CASC3-209ENST00000583902 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
CASC3-209ENST00000583902 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
CASC3-209ENST00000583902 PRXQ9BXM0 1461 aa15□□□□□ -0.01
CASC3-209ENST00000583902 PBRM1Q86U86 1689 aa15□□□□□ -0.01
CASC3-209ENST00000583902 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
CASC3-209ENST00000583902 MAGI1Q96QZ7 1491 aaPredicted RBP14.97□□□□□ -0.01
CASC3-209ENST00000583902 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
CASC3-209ENST00000583902 GOLGA3Q08378 1498 aa14.96□□□□□ -0.01
CASC3-209ENST00000583902 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
CASC3-209ENST00000583902 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
CASC3-209ENST00000583902 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■■□ 23.8
CASC3-209ENST00000583902 RAPGEF2Q9Y4G8 1499 aa14.95□□□□□ -0.02
CASC3-209ENST00000583902 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
CASC3-209ENST00000583902 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
CASC3-209ENST00000583902 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms