RNA–Protein interactions for RNA: ENST00000575839.2

CIC-208, Transcript of capicua transcriptional repressor, humanhuman

TSL 5

Gene CIC, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIC-208ENST00000575839 NISCHQ9Y2I1 1504 aa39.87■■■■□ 3.97
CIC-208ENST00000575839 ABCC9O60706 1549 aa36.57■■■■□ 3.44
CIC-208ENST00000575839 CCDC180Q9P1Z9 1646 aa35.97■■■■□ 3.35
CIC-208ENST00000575839 DNAJC5BQ9UF47 199 aa34.72■■■■□ 3.15
CIC-208ENST00000575839 RB1CC1Q8TDY2 1594 aa34.52■■■■□ 3.12
CIC-208ENST00000575839 NACADO15069 1562 aa34.14■■■■□ 3.06
CIC-208ENST00000575839 PABPN1Q86U42 306 aaKnown RBP eCLIP33.98■■■■□ 3.03
CIC-208ENST00000575839 DCAF8L2P0C7V8 631 aa33.96■■■■□ 3.03
CIC-208ENST00000575839 UNC13AQ9UPW8 1703 aa33.73■■■□□ 2.99
CIC-208ENST00000575839 BICRAQ9NZM4 1560 aa33.54■■■□□ 2.96
CIC-208ENST00000575839 MYO15BQ96JP2 1530 aa33.45■■■□□ 2.95
CIC-208ENST00000575839 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
CIC-208ENST00000575839 CECR2Q9BXF3 1484 aa32.97■■■□□ 2.87
CIC-208ENST00000575839 CC2D2AQ9P2K1 1620 aa32.96■■■□□ 2.87
CIC-208ENST00000575839 ZCCHC6Q5VYS8 1495 aaKnown RBP32.95■■■□□ 2.87
CIC-208ENST00000575839 DCAF1Q9Y4B6 1507 aa32.85■■■□□ 2.85
CIC-208ENST00000575839 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
CIC-208ENST00000575839 EIF4G1Q04637 1599 aaKnown RBP32.77■■■□□ 2.84
CIC-208ENST00000575839 DNAJC5Q9H3Z4 198 aa32.22■■■□□ 2.75
CIC-208ENST00000575839 CUX2O14529 1486 aa31.66■■■□□ 2.66
CIC-208ENST00000575839 ERCC6Q03468 1493 aa31.61■■■□□ 2.65
CIC-208ENST00000575839 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
CIC-208ENST00000575839 ATAD2BQ9ULI0 1458 aa31.38■■■□□ 2.61
CIC-208ENST00000575839 NESP48681 1621 aa31.27■■■□□ 2.6
CIC-208ENST00000575839 SMARCA2P51531 1590 aa31.26■■■□□ 2.59
CIC-208ENST00000575839 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
CIC-208ENST00000575839 SMARCA4P51532 1647 aa31.23■■■□□ 2.59
CIC-208ENST00000575839 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
CIC-208ENST00000575839 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
CIC-208ENST00000575839 BAZ1AQ9NRL2 1556 aaPredicted RBP30.99■■■□□ 2.55
CIC-208ENST00000575839 LAMC3Q9Y6N6 1575 aa30.9■■■□□ 2.54
CIC-208ENST00000575839 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
CIC-208ENST00000575839 KIF21AQ7Z4S6 1674 aa30.82■■■□□ 2.52
CIC-208ENST00000575839 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
CIC-208ENST00000575839 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
CIC-208ENST00000575839 TRIM41Q8WV44 630 aa30.7■■■□□ 2.51
CIC-208ENST00000575839 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
CIC-208ENST00000575839 MRC2Q9UBG0 1479 aa30.54■■■□□ 2.48
CIC-208ENST00000575839 WDR62O43379 1518 aa30.47■■■□□ 2.47
CIC-208ENST00000575839 WIZO95785 1651 aa30.36■■■□□ 2.45
CIC-208ENST00000575839 CEP164Q9UPV0 1460 aa30.32■■■□□ 2.44
CIC-208ENST00000575839 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
CIC-208ENST00000575839 OSCARQ8IYS5 282 aa30.14■■■□□ 2.42
CIC-208ENST00000575839 CFTRP13569 1480 aa30.1■■■□□ 2.41
CIC-208ENST00000575839 URB2Q14146 1524 aaKnown RBP30.03■■■□□ 2.4
CIC-208ENST00000575839 TOP2AP11388 1531 aaKnown RBP29.92■■■□□ 2.38
CIC-208ENST00000575839 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
CIC-208ENST00000575839 RIMBP3CA6NJZ7 1639 aa29.83■■■□□ 2.37
CIC-208ENST00000575839 RIMBP3BA6NNM3 1639 aa29.83■■■□□ 2.37
CIC-208ENST00000575839 RIMBP3Q9UFD9 1639 aa29.83■■■□□ 2.37
CIC-208ENST00000575839 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
CIC-208ENST00000575839 PRDM2Q13029 1718 aa29.73■■■□□ 2.35
CIC-208ENST00000575839 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
CIC-208ENST00000575839 ARHGEF11O15085 1522 aa29.69■■■□□ 2.34
CIC-208ENST00000575839 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
CIC-208ENST00000575839 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
CIC-208ENST00000575839 EIF4G3O43432 1585 aaKnown RBP29.56■■■□□ 2.32
CIC-208ENST00000575839 CYB5RLQ6IPT4 315 aa29.51■■■□□ 2.31
CIC-208ENST00000575839 ABCC8Q09428 1581 aa29.45■■■□□ 2.31
CIC-208ENST00000575839 DNMBPQ6XZF7 1577 aa29.45■■■□□ 2.31
CIC-208ENST00000575839 CHD1O14646 1710 aa29.43■■■□□ 2.3
CIC-208ENST00000575839 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.33e-6■■■■□ 24.7
CIC-208ENST00000575839 TRHP20396 242 aaPredicted RBP29.38■■■□□ 2.29
CIC-208ENST00000575839 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
CIC-208ENST00000575839 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
CIC-208ENST00000575839 FBLN2P98095 1184 aa29.36■■■□□ 2.29
CIC-208ENST00000575839 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
CIC-208ENST00000575839 RAD54L2Q9Y4B4 1467 aa29.21■■■□□ 2.27
CIC-208ENST00000575839 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
CIC-208ENST00000575839 SOGA1O94964 1423 aa29.12■■■□□ 2.25
CIC-208ENST00000575839 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
CIC-208ENST00000575839 CLASP1Q7Z460 1538 aa29.06■■■□□ 2.24
CIC-208ENST00000575839 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
CIC-208ENST00000575839 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
CIC-208ENST00000575839 SYNJ1O43426 1573 aa29.01■■■□□ 2.23
CIC-208ENST00000575839 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
CIC-208ENST00000575839 MAGI1Q96QZ7 1491 aaPredicted RBP28.97■■■□□ 2.23
CIC-208ENST00000575839 GRIN2BQ13224 1484 aa28.93■■■□□ 2.22
CIC-208ENST00000575839 CUX1P39880 1505 aa28.92■■■□□ 2.22
CIC-208ENST00000575839 SYNJ2O15056 1496 aa28.9■■■□□ 2.22
CIC-208ENST00000575839 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
CIC-208ENST00000575839 GAPVD1Q14C86 1478 aa28.81■■■□□ 2.2
CIC-208ENST00000575839 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
CIC-208ENST00000575839 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
CIC-208ENST00000575839 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.17
CIC-208ENST00000575839 ERCC6L2Q5T890 1561 aa28.62■■■□□ 2.17
CIC-208ENST00000575839 GRIN2AQ12879 1464 aa28.57■■■□□ 2.16
CIC-208ENST00000575839 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
CIC-208ENST00000575839 CEP170Q5SW79 1584 aa28.5■■■□□ 2.15
CIC-208ENST00000575839 NUP160Q12769 1436 aa28.47■■■□□ 2.15
CIC-208ENST00000575839 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
CIC-208ENST00000575839 SHROOM2Q13796 1616 aa28.4■■■□□ 2.14
CIC-208ENST00000575839 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
CIC-208ENST00000575839 KIF13AQ9H1H9 1805 aa28.3■■■□□ 2.12
CIC-208ENST00000575839 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
CIC-208ENST00000575839 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
CIC-208ENST00000575839 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
CIC-208ENST00000575839 PRG4Q92954 1404 aaPredicted RBP28.27■■■□□ 2.12
CIC-208ENST00000575839 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
CIC-208ENST00000575839 JPH4Q96JJ6 628 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms