RNA–Protein interactions for RNA: ENST00000407293.5

KRTCAP3-202, Transcript of keratinocyte associated protein 3, humanhuman

TSL 2 BASIC

Gene KRTCAP3, Length 942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-202ENST00000407293 NISCHQ9Y2I1 1504 aa44.79■■■■■ 4.76
KRTCAP3-202ENST00000407293 ABCC9O60706 1549 aa40.4■■■■■ 4.06
KRTCAP3-202ENST00000407293 CCDC180Q9P1Z9 1646 aa40.16■■■■■ 4.02
KRTCAP3-202ENST00000407293 RB1CC1Q8TDY2 1594 aa38.33■■■■□ 3.73
KRTCAP3-202ENST00000407293 DNAJC5BQ9UF47 199 aa38.09■■■■□ 3.69
KRTCAP3-202ENST00000407293 NACADO15069 1562 aa38.05■■■■□ 3.68
KRTCAP3-202ENST00000407293 DCAF8L2P0C7V8 631 aa37.95■■■■□ 3.67
KRTCAP3-202ENST00000407293 PABPN1Q86U42 306 aaKnown RBP eCLIP37.65■■■■□ 3.62
KRTCAP3-202ENST00000407293 MYO15BQ96JP2 1530 aa37.47■■■■□ 3.59
KRTCAP3-202ENST00000407293 UNC13AQ9UPW8 1703 aa37.46■■■■□ 3.59
KRTCAP3-202ENST00000407293 BICRAQ9NZM4 1560 aa37.26■■■■□ 3.56
KRTCAP3-202ENST00000407293 ZCCHC6Q5VYS8 1495 aaKnown RBP37.07■■■■□ 3.53
KRTCAP3-202ENST00000407293 DCAF1Q9Y4B6 1507 aa36.95■■■■□ 3.51
KRTCAP3-202ENST00000407293 SHROOM4Q9ULL8 1493 aa36.68■■■■□ 3.46
KRTCAP3-202ENST00000407293 SCRIBQ14160 1630 aa36.65■■■■□ 3.46
KRTCAP3-202ENST00000407293 CC2D2AQ9P2K1 1620 aa36.45■■■■□ 3.43
KRTCAP3-202ENST00000407293 CECR2Q9BXF3 1484 aa36.39■■■■□ 3.42
KRTCAP3-202ENST00000407293 EIF4G1Q04637 1599 aaKnown RBP36.34■■■■□ 3.41
KRTCAP3-202ENST00000407293 NCAPD3P42695 1498 aa35.16■■■■□ 3.22
KRTCAP3-202ENST00000407293 ATAD2BQ9ULI0 1458 aa35.05■■■■□ 3.2
KRTCAP3-202ENST00000407293 DNAJC5Q9H3Z4 198 aa35.02■■■■□ 3.2
KRTCAP3-202ENST00000407293 SMARCA4P51532 1647 aa34.94■■■■□ 3.18
KRTCAP3-202ENST00000407293 SMARCA2P51531 1590 aa34.89■■■■□ 3.18
KRTCAP3-202ENST00000407293 ERCC6Q03468 1493 aa34.85■■■■□ 3.17
KRTCAP3-202ENST00000407293 HMGXB3Q12766 1538 aa34.84■■■■□ 3.17
KRTCAP3-202ENST00000407293 CUX2O14529 1486 aa34.82■■■■□ 3.16
KRTCAP3-202ENST00000407293 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
KRTCAP3-202ENST00000407293 NESP48681 1621 aa34.68■■■■□ 3.14
KRTCAP3-202ENST00000407293 BAZ1BQ9UIG0 1483 aaKnown RBP34.67■■■■□ 3.14
KRTCAP3-202ENST00000407293 PEG3Q9GZU2 1588 aa34.59■■■■□ 3.13
KRTCAP3-202ENST00000407293 MROH2BQ7Z745 1585 aa34.53■■■■□ 3.12
KRTCAP3-202ENST00000407293 LAMC3Q9Y6N6 1575 aa34.34■■■■□ 3.09
KRTCAP3-202ENST00000407293 THOC2Q8NI27 1593 aaKnown RBP34.28■■■■□ 3.08
KRTCAP3-202ENST00000407293 PDS5BQ9NTI5 1447 aa34.19■■■■□ 3.06
KRTCAP3-202ENST00000407293 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
KRTCAP3-202ENST00000407293 CADPSQ9ULU8 1353 aa34.11■■■■□ 3.05
KRTCAP3-202ENST00000407293 WIZO95785 1651 aa34.09■■■■□ 3.05
KRTCAP3-202ENST00000407293 MRC2Q9UBG0 1479 aa33.88■■■■□ 3.01
KRTCAP3-202ENST00000407293 WDR62O43379 1518 aa33.8■■■■□ 3
KRTCAP3-202ENST00000407293 RSF1Q96T23 1441 aaPredicted RBP33.79■■■■□ 3
KRTCAP3-202ENST00000407293 CEP164Q9UPV0 1460 aa33.72■■■□□ 2.99
KRTCAP3-202ENST00000407293 FANCD2Q9BXW9 1451 aa33.7■■■□□ 2.99
KRTCAP3-202ENST00000407293 CFTRP13569 1480 aa33.68■■■□□ 2.98
KRTCAP3-202ENST00000407293 TOP2AP11388 1531 aaKnown RBP33.63■■■□□ 2.97
KRTCAP3-202ENST00000407293 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
KRTCAP3-202ENST00000407293 TRIM41Q8WV44 630 aa33.44■■■□□ 2.94
KRTCAP3-202ENST00000407293 CCDC88BA6NC98 1476 aa33.31■■■□□ 2.92
KRTCAP3-202ENST00000407293 OSCARQ8IYS5 282 aa33.28■■■□□ 2.92
KRTCAP3-202ENST00000407293 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
KRTCAP3-202ENST00000407293 ZNF608Q9ULD9 1512 aaPredicted RBP33.07■■■□□ 2.88
KRTCAP3-202ENST00000407293 IFT140Q96RY7 1462 aa33.06■■■□□ 2.88
KRTCAP3-202ENST00000407293 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
KRTCAP3-202ENST00000407293 ABCC8Q09428 1581 aa32.94■■■□□ 2.86
KRTCAP3-202ENST00000407293 DNMBPQ6XZF7 1577 aa32.88■■■□□ 2.85
KRTCAP3-202ENST00000407293 EIF4G3O43432 1585 aaKnown RBP32.81■■■□□ 2.84
KRTCAP3-202ENST00000407293 RIMBP3CA6NJZ7 1639 aa32.8■■■□□ 2.84
KRTCAP3-202ENST00000407293 RIMBP3BA6NNM3 1639 aa32.8■■■□□ 2.84
KRTCAP3-202ENST00000407293 RIMBP3Q9UFD9 1639 aa32.8■■■□□ 2.84
KRTCAP3-202ENST00000407293 AQRO60306 1485 aaKnown RBP eCLIP32.77■■■□□ 2.84
KRTCAP3-202ENST00000407293 TARBP1Q13395 1621 aaKnown RBP32.75■■■□□ 2.83
KRTCAP3-202ENST00000407293 POLA1P09884 1462 aaPredicted RBP32.71■■■□□ 2.83
KRTCAP3-202ENST00000407293 ARHGEF11O15085 1522 aa32.7■■■□□ 2.83
KRTCAP3-202ENST00000407293 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
KRTCAP3-202ENST00000407293 FBLN2P98095 1184 aa32.59■■■□□ 2.81
KRTCAP3-202ENST00000407293 CHD1O14646 1710 aa32.58■■■□□ 2.81
KRTCAP3-202ENST00000407293 SOGA1O94964 1423 aa32.58■■■□□ 2.81
KRTCAP3-202ENST00000407293 TDRD9Q8NDG6 1382 aaKnown RBP32.56■■■□□ 2.8
KRTCAP3-202ENST00000407293 CYB5RLQ6IPT4 315 aa32.53■■■□□ 2.8
KRTCAP3-202ENST00000407293 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
KRTCAP3-202ENST00000407293 CUX1P39880 1505 aa32.44■■■□□ 2.78
KRTCAP3-202ENST00000407293 SNAPC4Q5SXM2 1469 aa32.39■■■□□ 2.78
KRTCAP3-202ENST00000407293 ARAP1Q96P48 1450 aa32.38■■■□□ 2.77
KRTCAP3-202ENST00000407293 WDR97A6NE52 1622 aa32.35■■■□□ 2.77
KRTCAP3-202ENST00000407293 CHMP7Q8WUX9 453 aaPredicted RBP32.31■■■□□ 2.76
KRTCAP3-202ENST00000407293 GRIN2BQ13224 1484 aa32.28■■■□□ 2.76
KRTCAP3-202ENST00000407293 MAGI1Q96QZ7 1491 aaPredicted RBP32.27■■■□□ 2.76
KRTCAP3-202ENST00000407293 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
KRTCAP3-202ENST00000407293 CLASP1Q7Z460 1538 aa32.23■■■□□ 2.75
KRTCAP3-202ENST00000407293 TRHP20396 242 aaPredicted RBP32.19■■■□□ 2.74
KRTCAP3-202ENST00000407293 SYNJ2O15056 1496 aa32.18■■■□□ 2.74
KRTCAP3-202ENST00000407293 SYNJ1O43426 1573 aa32.18■■■□□ 2.74
KRTCAP3-202ENST00000407293 GAPVD1Q14C86 1478 aa32.16■■■□□ 2.74
KRTCAP3-202ENST00000407293 ABCA10Q8WWZ4 1543 aa32.1■■■□□ 2.73
KRTCAP3-202ENST00000407293 PBRM1Q86U86 1689 aa32.09■■■□□ 2.73
KRTCAP3-202ENST00000407293 ABCA5Q8WWZ7 1642 aa32.04■■■□□ 2.72
KRTCAP3-202ENST00000407293 WRNQ14191 1432 aaPredicted RBP eCLIP31.95■■■□□ 2.71
KRTCAP3-202ENST00000407293 GRIN2AQ12879 1464 aa31.86■■■□□ 2.69
KRTCAP3-202ENST00000407293 TOP2BQ02880 1626 aa31.86■■■□□ 2.69
KRTCAP3-202ENST00000407293 BIVM-ERCC5R4GMW8 1640 aa31.84■■■□□ 2.69
KRTCAP3-202ENST00000407293 ADAMTS12P58397 1594 aa31.81■■■□□ 2.68
KRTCAP3-202ENST00000407293 NUP160Q12769 1436 aa31.77■■■□□ 2.68
KRTCAP3-202ENST00000407293 ERCC6L2Q5T890 1561 aa31.77■■■□□ 2.68
KRTCAP3-202ENST00000407293 CEP170Q5SW79 1584 aa31.75■■■□□ 2.67
KRTCAP3-202ENST00000407293 FHAD1B1AJZ9 1412 aa31.74■■■□□ 2.67
KRTCAP3-202ENST00000407293 ERICH3Q5RHP9 1530 aa31.68■■■□□ 2.66
KRTCAP3-202ENST00000407293 SHROOM2Q13796 1616 aa31.61■■■□□ 2.65
KRTCAP3-202ENST00000407293 PRG4Q92954 1404 aaPredicted RBP31.49■■■□□ 2.63
KRTCAP3-202ENST00000407293 JPH4Q96JJ6 628 aa31.49■■■□□ 2.63
KRTCAP3-202ENST00000407293 RUSC2Q8N2Y8 1516 aa31.35■■■□□ 2.61
KRTCAP3-202ENST00000407293 IGF1RP08069 1367 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms