RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 AEBP2Q6ZN18 517 aaPredicted RBP29.1■■■□□ 2.25
GPHN-215ENST00000557654 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
GPHN-215ENST00000557654 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
GPHN-215ENST00000557654 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
GPHN-215ENST00000557654 FOXD1Q16676 465 aa22.92■■□□□ 1.26
GPHN-215ENST00000557654 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
GPHN-215ENST00000557654 PPP6R1Q9UPN7 881 aa22.01■■□□□ 1.11
GPHN-215ENST00000557654 ADRA2BP18089 450 aa21.99■■□□□ 1.11
GPHN-215ENST00000557654 PIAS4Q8N2W9 510 aaPredicted RBP21.57■■□□□ 1.04
GPHN-215ENST00000557654 MSH5O43196 834 aa21.07■□□□□ 0.96
GPHN-215ENST00000557654 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
GPHN-215ENST00000557654 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
GPHN-215ENST00000557654 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
GPHN-215ENST00000557654 DMRT2Q9Y5R5 561 aa19.63■□□□□ 0.73
GPHN-215ENST00000557654 KCNA4P22459 653 aa19.61■□□□□ 0.73
GPHN-215ENST00000557654 CNKSR2Q8WXI2 1034 aa19.56■□□□□ 0.72
GPHN-215ENST00000557654 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
GPHN-215ENST00000557654 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
GPHN-215ENST00000557654 NPM3O75607 178 aaKnown RBP19.32■□□□□ 0.68
GPHN-215ENST00000557654 RNF216Q9NWF9 866 aaPredicted RBP19.2■□□□□ 0.66
GPHN-215ENST00000557654 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
GPHN-215ENST00000557654 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
GPHN-215ENST00000557654 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
GPHN-215ENST00000557654 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
GPHN-215ENST00000557654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.52
GPHN-215ENST00000557654 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
GPHN-215ENST00000557654 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
GPHN-215ENST00000557654 ZBTB22O15209 634 aa18.08■□□□□ 0.48
GPHN-215ENST00000557654 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
GPHN-215ENST00000557654 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
GPHN-215ENST00000557654 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
GPHN-215ENST00000557654 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
GPHN-215ENST00000557654 C1QBPQ07021 282 aaKnown RBP17.82■□□□□ 0.44
GPHN-215ENST00000557654 MYCNP04198 464 aaPredicted RBP17.8■□□□□ 0.44
GPHN-215ENST00000557654 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
GPHN-215ENST00000557654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.61■□□□□ 0.41
GPHN-215ENST00000557654 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
GPHN-215ENST00000557654 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
GPHN-215ENST00000557654 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
GPHN-215ENST00000557654 CAPN15O75808 1086 aa17.48■□□□□ 0.39
GPHN-215ENST00000557654 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
GPHN-215ENST00000557654 APLP2Q06481 763 aa17.43■□□□□ 0.38
GPHN-215ENST00000557654 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
GPHN-215ENST00000557654 ATXN8OSP0DMR3 200 aa17.31■□□□□ 0.36
GPHN-215ENST00000557654 ZNF219Q9P2Y4 722 aaPredicted RBP17.28■□□□□ 0.36
GPHN-215ENST00000557654 DSG3P32926 999 aa17.21■□□□□ 0.35
GPHN-215ENST00000557654 ABCB7O75027 752 aa17.19■□□□□ 0.34
GPHN-215ENST00000557654 POLA2Q14181 598 aa17.06■□□□□ 0.32
GPHN-215ENST00000557654 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
GPHN-215ENST00000557654 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
GPHN-215ENST00000557654 FBLN2P98095 1184 aa16.59■□□□□ 0.25
GPHN-215ENST00000557654 OSCARQ8IYS5 282 aa16.52■□□□□ 0.24
GPHN-215ENST00000557654 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
GPHN-215ENST00000557654 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
GPHN-215ENST00000557654 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
GPHN-215ENST00000557654 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
GPHN-215ENST00000557654 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
GPHN-215ENST00000557654 SPDYE4A6NLX3 237 aa16.18■□□□□ 0.18
GPHN-215ENST00000557654 FKBP8Q14318 412 aa16.13■□□□□ 0.17
GPHN-215ENST00000557654 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
GPHN-215ENST00000557654 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
GPHN-215ENST00000557654 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
GPHN-215ENST00000557654 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
GPHN-215ENST00000557654 PROM2Q8N271 834 aa15.86■□□□□ 0.13
GPHN-215ENST00000557654 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
GPHN-215ENST00000557654 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
GPHN-215ENST00000557654 SPDYE1Q8NFV5 336 aaPredicted RBP15.79■□□□□ 0.12
GPHN-215ENST00000557654 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
GPHN-215ENST00000557654 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
GPHN-215ENST00000557654 PRR29P0C7W0 189 aa15.6■□□□□ 0.09
GPHN-215ENST00000557654 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
GPHN-215ENST00000557654 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
GPHN-215ENST00000557654 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
GPHN-215ENST00000557654 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
GPHN-215ENST00000557654 PRKAR2AP13861 404 aaKnown RBP15.44■□□□□ 0.06
GPHN-215ENST00000557654 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
GPHN-215ENST00000557654 POTEHQ6S545 545 aa15.39■□□□□ 0.05
GPHN-215ENST00000557654 MIER1Q8N108 512 aa15.35■□□□□ 0.05
GPHN-215ENST00000557654 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
GPHN-215ENST00000557654 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
GPHN-215ENST00000557654 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
GPHN-215ENST00000557654 MNX1P50219 401 aaPredicted RBP15.24■□□□□ 0.03
GPHN-215ENST00000557654 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
GPHN-215ENST00000557654 IFNLR1Q8IU57 520 aaPredicted RBP15.16■□□□□ 0.02
GPHN-215ENST00000557654 KLHL34Q8N239 644 aa15.11■□□□□ 0.01
GPHN-215ENST00000557654 HAX1O00165 279 aa15.07■□□□□ 0
GPHN-215ENST00000557654 NPM1P06748 294 aaKnown RBP eCLIP15.07■□□□□ 0
GPHN-215ENST00000557654 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
GPHN-215ENST00000557654 C19orf67A6NJJ6 358 aa15.02■□□□□ -0
GPHN-215ENST00000557654 EVX2Q03828 476 aa15.01□□□□□ -0.01
GPHN-215ENST00000557654 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
GPHN-215ENST00000557654 NUBP1P53384 320 aa14.98□□□□□ -0.01
GPHN-215ENST00000557654 RASEFQ8IZ41 740 aa14.98□□□□□ -0.01
GPHN-215ENST00000557654 SPOCK2Q92563 424 aa14.93□□□□□ -0.02
GPHN-215ENST00000557654 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
GPHN-215ENST00000557654 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
GPHN-215ENST00000557654 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
GPHN-215ENST00000557654 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
GPHN-215ENST00000557654 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
GPHN-215ENST00000557654 PHF12Q96QT6 1004 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 328.2 ms