RNA–Protein interactions for RNA: ENST00000544392.5

CACUL1-207, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-207ENST00000544392 AEBP2Q6ZN18 517 aaPredicted RBP29.63■■■□□ 2.33
CACUL1-207ENST00000544392 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
CACUL1-207ENST00000544392 PHF23Q9BUL5 403 aaPredicted RBP25.64■■□□□ 1.7
CACUL1-207ENST00000544392 SENP3Q9H4L4 574 aaPredicted RBP25.07■■□□□ 1.6
CACUL1-207ENST00000544392 PLPPR3Q6T4P5 718 aa23.71■■□□□ 1.39
CACUL1-207ENST00000544392 FOXD1Q16676 465 aa23.28■■□□□ 1.32
CACUL1-207ENST00000544392 ADRA2BP18089 450 aa22.58■■□□□ 1.21
CACUL1-207ENST00000544392 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
CACUL1-207ENST00000544392 PIAS4Q8N2W9 510 aaPredicted RBP22.03■■□□□ 1.12
CACUL1-207ENST00000544392 MSH5O43196 834 aa21.35■■□□□ 1.01
CACUL1-207ENST00000544392 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
CACUL1-207ENST00000544392 KCNA4P22459 653 aa20.71■□□□□ 0.91
CACUL1-207ENST00000544392 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
CACUL1-207ENST00000544392 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
CACUL1-207ENST00000544392 NCBP3Q53F19 620 aaKnown RBP20.41■□□□□ 0.86
CACUL1-207ENST00000544392 CNKSR2Q8WXI2 1034 aa20.28■□□□□ 0.84
CACUL1-207ENST00000544392 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
CACUL1-207ENST00000544392 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
CACUL1-207ENST00000544392 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
CACUL1-207ENST00000544392 RNF216Q9NWF9 866 aaPredicted RBP19.82■□□□□ 0.76
CACUL1-207ENST00000544392 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
CACUL1-207ENST00000544392 HOXD11P31277 338 aaPredicted RBP19.69■□□□□ 0.74
CACUL1-207ENST00000544392 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
CACUL1-207ENST00000544392 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
CACUL1-207ENST00000544392 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
CACUL1-207ENST00000544392 POTEDQ86YR6 584 aa19.14■□□□□ 0.65
CACUL1-207ENST00000544392 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
CACUL1-207ENST00000544392 ZBTB22O15209 634 aa19.06■□□□□ 0.64
CACUL1-207ENST00000544392 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
CACUL1-207ENST00000544392 FOXD4L1Q9NU39 408 aa18.97■□□□□ 0.63
CACUL1-207ENST00000544392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.6
CACUL1-207ENST00000544392 MYCNP04198 464 aaPredicted RBP18.6■□□□□ 0.57
CACUL1-207ENST00000544392 U3KPZ7 1027 aaPredicted RBP18.53■□□□□ 0.56
CACUL1-207ENST00000544392 RNF39Q9H2S5 420 aa18.32■□□□□ 0.52
CACUL1-207ENST00000544392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
CACUL1-207ENST00000544392 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
CACUL1-207ENST00000544392 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.52
CACUL1-207ENST00000544392 ATXN8OSP0DMR3 200 aa18.22■□□□□ 0.51
CACUL1-207ENST00000544392 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
CACUL1-207ENST00000544392 C1QBPQ07021 282 aaKnown RBP18.1■□□□□ 0.49
CACUL1-207ENST00000544392 APLP2Q06481 763 aa18.06■□□□□ 0.48
CACUL1-207ENST00000544392 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
CACUL1-207ENST00000544392 CAPN15O75808 1086 aa17.91■□□□□ 0.46
CACUL1-207ENST00000544392 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
CACUL1-207ENST00000544392 ZNF219Q9P2Y4 722 aaPredicted RBP17.82■□□□□ 0.44
CACUL1-207ENST00000544392 CACNB1Q02641 598 aaPredicted RBP17.75■□□□□ 0.43
CACUL1-207ENST00000544392 ABCB7O75027 752 aa17.61■□□□□ 0.41
CACUL1-207ENST00000544392 POLA2Q14181 598 aa17.61■□□□□ 0.41
CACUL1-207ENST00000544392 DSG3P32926 999 aa17.52■□□□□ 0.4
CACUL1-207ENST00000544392 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
CACUL1-207ENST00000544392 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
CACUL1-207ENST00000544392 FBLN2P98095 1184 aa17.32■□□□□ 0.36
CACUL1-207ENST00000544392 FKBP8Q14318 412 aa17.29■□□□□ 0.36
CACUL1-207ENST00000544392 ZBTB12Q9Y330 459 aaPredicted RBP17.26■□□□□ 0.35
CACUL1-207ENST00000544392 SPDYE4A6NLX3 237 aa17.04■□□□□ 0.32
CACUL1-207ENST00000544392 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
CACUL1-207ENST00000544392 ZNF692Q9BU19 519 aaPredicted RBP16.84■□□□□ 0.29
CACUL1-207ENST00000544392 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
CACUL1-207ENST00000544392 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
CACUL1-207ENST00000544392 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
CACUL1-207ENST00000544392 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
CACUL1-207ENST00000544392 SSUH2Q9Y2M2 353 aa16.73■□□□□ 0.27
CACUL1-207ENST00000544392 PROM2Q8N271 834 aa16.72■□□□□ 0.27
CACUL1-207ENST00000544392 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
CACUL1-207ENST00000544392 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
CACUL1-207ENST00000544392 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
CACUL1-207ENST00000544392 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
CACUL1-207ENST00000544392 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
CACUL1-207ENST00000544392 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
CACUL1-207ENST00000544392 ABCC9O60706 1549 aa16.46■□□□□ 0.23
CACUL1-207ENST00000544392 MYO15BQ96JP2 1530 aa16.46■□□□□ 0.23
CACUL1-207ENST00000544392 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
CACUL1-207ENST00000544392 VASPP50552 380 aaPredicted RBP16.35■□□□□ 0.21
CACUL1-207ENST00000544392 NACADO15069 1562 aa16.34■□□□□ 0.21
CACUL1-207ENST00000544392 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
CACUL1-207ENST00000544392 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
CACUL1-207ENST00000544392 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
CACUL1-207ENST00000544392 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
CACUL1-207ENST00000544392 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
CACUL1-207ENST00000544392 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
CACUL1-207ENST00000544392 PLCD3Q8N3E9 789 aa16.16■□□□□ 0.18
CACUL1-207ENST00000544392 IFNLR1Q8IU57 520 aaPredicted RBP16.15■□□□□ 0.18
CACUL1-207ENST00000544392 MIER1Q8N108 512 aa16.15■□□□□ 0.18
CACUL1-207ENST00000544392 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
CACUL1-207ENST00000544392 KLHL34Q8N239 644 aa16.06■□□□□ 0.16
CACUL1-207ENST00000544392 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
CACUL1-207ENST00000544392 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
CACUL1-207ENST00000544392 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
CACUL1-207ENST00000544392 CREBZFQ9NS37 354 aa15.96■□□□□ 0.15
CACUL1-207ENST00000544392 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
CACUL1-207ENST00000544392 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
CACUL1-207ENST00000544392 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
CACUL1-207ENST00000544392 SPOCK2Q92563 424 aa15.9■□□□□ 0.14
CACUL1-207ENST00000544392 CHADLQ6NUI6 762 aa15.88■□□□□ 0.13
CACUL1-207ENST00000544392 FXR2P51116 673 aaKnown RBP eCLIP15.81■□□□□ 0.12
CACUL1-207ENST00000544392 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
CACUL1-207ENST00000544392 MNX1P50219 401 aaPredicted RBP15.8■□□□□ 0.12
CACUL1-207ENST00000544392 SUPT5HO00267 1087 aaKnown RBP15.77■□□□□ 0.12
CACUL1-207ENST00000544392 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
CACUL1-207ENST00000544392 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms