RNA–Protein interactions for RNA: ENST00000412102.5

LINC00479-201, long intergenic non-protein coding RNA 479, humanhuman

TSL 2 BASIC

Gene LINC00479, Length 2,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-201ENST00000412102 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
LINC00479-201ENST00000412102 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
LINC00479-201ENST00000412102 ABCC9O60706 1549 aa27.85■■■□□ 2.05
LINC00479-201ENST00000412102 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
LINC00479-201ENST00000412102 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
LINC00479-201ENST00000412102 NACADO15069 1562 aa26.84■■□□□ 1.89
LINC00479-201ENST00000412102 DCAF1Q9Y4B6 1507 aa26.84■■□□□ 1.89
LINC00479-201ENST00000412102 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
LINC00479-201ENST00000412102 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
LINC00479-201ENST00000412102 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
LINC00479-201ENST00000412102 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
LINC00479-201ENST00000412102 SHROOM4Q9ULL8 1493 aa26.31■■□□□ 1.8
LINC00479-201ENST00000412102 PABPN1Q86U42 306 aaKnown RBP eCLIP26.2■■□□□ 1.78
LINC00479-201ENST00000412102 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
LINC00479-201ENST00000412102 CECR2Q9BXF3 1484 aa25.48■■□□□ 1.67
LINC00479-201ENST00000412102 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.65
LINC00479-201ENST00000412102 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
LINC00479-201ENST00000412102 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
LINC00479-201ENST00000412102 SMARCA4P51532 1647 aa25.2■■□□□ 1.62
LINC00479-201ENST00000412102 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
LINC00479-201ENST00000412102 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
LINC00479-201ENST00000412102 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
LINC00479-201ENST00000412102 WIZO95785 1651 aa25■■□□□ 1.59
LINC00479-201ENST00000412102 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
LINC00479-201ENST00000412102 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.59
LINC00479-201ENST00000412102 PEG3Q9GZU2 1588 aa24.86■■□□□ 1.57
LINC00479-201ENST00000412102 SMARCA2P51531 1590 aa24.85■■□□□ 1.57
LINC00479-201ENST00000412102 NCAPD3P42695 1498 aa24.81■■□□□ 1.56
LINC00479-201ENST00000412102 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
LINC00479-201ENST00000412102 HMGXB3Q12766 1538 aa24.68■■□□□ 1.54
LINC00479-201ENST00000412102 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
LINC00479-201ENST00000412102 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
LINC00479-201ENST00000412102 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
LINC00479-201ENST00000412102 NESP48681 1621 aa24.28■■□□□ 1.48
LINC00479-201ENST00000412102 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
LINC00479-201ENST00000412102 CFTRP13569 1480 aa24.09■■□□□ 1.45
LINC00479-201ENST00000412102 LAMC3Q9Y6N6 1575 aa24.06■■□□□ 1.44
LINC00479-201ENST00000412102 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
LINC00479-201ENST00000412102 PRDM2Q13029 1718 aa23.91■■□□□ 1.42
LINC00479-201ENST00000412102 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
LINC00479-201ENST00000412102 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
LINC00479-201ENST00000412102 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
LINC00479-201ENST00000412102 CEP164Q9UPV0 1460 aa23.79■■□□□ 1.4
LINC00479-201ENST00000412102 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
LINC00479-201ENST00000412102 URB2Q14146 1524 aaKnown RBP23.67■■□□□ 1.38
LINC00479-201ENST00000412102 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
LINC00479-201ENST00000412102 MRC2Q9UBG0 1479 aa23.64■■□□□ 1.37
LINC00479-201ENST00000412102 CUX1P39880 1505 aa23.6■■□□□ 1.37
LINC00479-201ENST00000412102 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
LINC00479-201ENST00000412102 TOPBP1Q92547 1522 aa23.57■■□□□ 1.36
LINC00479-201ENST00000412102 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
LINC00479-201ENST00000412102 WDR62O43379 1518 aa23.54■■□□□ 1.36
LINC00479-201ENST00000412102 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
LINC00479-201ENST00000412102 HRCP23327 699 aa23.5■■□□□ 1.35
LINC00479-201ENST00000412102 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
LINC00479-201ENST00000412102 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
LINC00479-201ENST00000412102 FGD5Q6ZNL6 1462 aa23.44■■□□□ 1.34
LINC00479-201ENST00000412102 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
LINC00479-201ENST00000412102 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
LINC00479-201ENST00000412102 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
LINC00479-201ENST00000412102 CUX2O14529 1486 aa23.4■■□□□ 1.34
LINC00479-201ENST00000412102 RAD54L2Q9Y4B4 1467 aa23.4■■□□□ 1.34
LINC00479-201ENST00000412102 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
LINC00479-201ENST00000412102 SOGA1O94964 1423 aa23.33■■□□□ 1.33
LINC00479-201ENST00000412102 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
LINC00479-201ENST00000412102 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
LINC00479-201ENST00000412102 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
LINC00479-201ENST00000412102 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
LINC00479-201ENST00000412102 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
LINC00479-201ENST00000412102 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
LINC00479-201ENST00000412102 WDR97A6NE52 1622 aa23.17■■□□□ 1.3
LINC00479-201ENST00000412102 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
LINC00479-201ENST00000412102 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
LINC00479-201ENST00000412102 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
LINC00479-201ENST00000412102 EIF4G3O43432 1585 aaKnown RBP23.11■■□□□ 1.29
LINC00479-201ENST00000412102 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
LINC00479-201ENST00000412102 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
LINC00479-201ENST00000412102 KIF27Q86VH2 1401 aa23.02■■□□□ 1.28
LINC00479-201ENST00000412102 PBRM1Q86U86 1689 aa22.98■■□□□ 1.27
LINC00479-201ENST00000412102 IGF1RP08069 1367 aa22.94■■□□□ 1.26
LINC00479-201ENST00000412102 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
LINC00479-201ENST00000412102 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
LINC00479-201ENST00000412102 EHMT2Q96KQ7 1210 aa22.91■■□□□ 1.26
LINC00479-201ENST00000412102 FBLN2P98095 1184 aa22.89■■□□□ 1.25
LINC00479-201ENST00000412102 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
LINC00479-201ENST00000412102 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
LINC00479-201ENST00000412102 EEA1Q15075 1411 aa22.82■■□□□ 1.24
LINC00479-201ENST00000412102 ZEB1P37275 1124 aaPredicted RBP22.81■■□□□ 1.24
LINC00479-201ENST00000412102 CARMIL1Q5VZK9 1371 aa22.8■■□□□ 1.24
LINC00479-201ENST00000412102 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
LINC00479-201ENST00000412102 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
LINC00479-201ENST00000412102 ADAMTS12P58397 1594 aa22.78■■□□□ 1.24
LINC00479-201ENST00000412102 CHD1O14646 1710 aa22.77■■□□□ 1.24
LINC00479-201ENST00000412102 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
LINC00479-201ENST00000412102 SYNJ2O15056 1496 aa22.74■■□□□ 1.23
LINC00479-201ENST00000412102 CUL7Q14999 1698 aa22.73■■□□□ 1.23
LINC00479-201ENST00000412102 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
LINC00479-201ENST00000412102 PRXQ9BXM0 1461 aa22.72■■□□□ 1.23
LINC00479-201ENST00000412102 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
LINC00479-201ENST00000412102 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms