RNA–Protein interactions for RNA: ENST00000584463.1

RFNG-210, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 3

Gene RFNG, Length 424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-210ENST00000584463 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
RFNG-210ENST00000584463 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
RFNG-210ENST00000584463 ABCC9O60706 1549 aa27.94■■■□□ 2.06
RFNG-210ENST00000584463 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
RFNG-210ENST00000584463 ZCCHC6Q5VYS8 1495 aaKnown RBP26.94■■□□□ 1.9
RFNG-210ENST00000584463 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
RFNG-210ENST00000584463 NACADO15069 1562 aa26.92■■□□□ 1.9
RFNG-210ENST00000584463 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
RFNG-210ENST00000584463 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
RFNG-210ENST00000584463 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
RFNG-210ENST00000584463 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
RFNG-210ENST00000584463 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
RFNG-210ENST00000584463 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
RFNG-210ENST00000584463 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
RFNG-210ENST00000584463 DNAJC5BQ9UF47 199 aa25.47■■□□□ 1.67
RFNG-210ENST00000584463 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
RFNG-210ENST00000584463 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
RFNG-210ENST00000584463 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
RFNG-210ENST00000584463 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
RFNG-210ENST00000584463 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
RFNG-210ENST00000584463 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.58
RFNG-210ENST00000584463 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
RFNG-210ENST00000584463 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
RFNG-210ENST00000584463 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
RFNG-210ENST00000584463 PEG3Q9GZU2 1588 aa24.78■■□□□ 1.56
RFNG-210ENST00000584463 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
RFNG-210ENST00000584463 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
RFNG-210ENST00000584463 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
RFNG-210ENST00000584463 WIZO95785 1651 aa24.64■■□□□ 1.53
RFNG-210ENST00000584463 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
RFNG-210ENST00000584463 NESP48681 1621 aa24.21■■□□□ 1.47
RFNG-210ENST00000584463 LAMC3Q9Y6N6 1575 aa24.17■■□□□ 1.46
RFNG-210ENST00000584463 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
RFNG-210ENST00000584463 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
RFNG-210ENST00000584463 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
RFNG-210ENST00000584463 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
RFNG-210ENST00000584463 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
RFNG-210ENST00000584463 CFTRP13569 1480 aa24■■□□□ 1.43
RFNG-210ENST00000584463 KIF21AQ7Z4S6 1674 aa23.93■■□□□ 1.42
RFNG-210ENST00000584463 FANCD2Q9BXW9 1451 aa23.86■■□□□ 1.41
RFNG-210ENST00000584463 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
RFNG-210ENST00000584463 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
RFNG-210ENST00000584463 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
RFNG-210ENST00000584463 CUX2O14529 1486 aa23.77■■□□□ 1.4
RFNG-210ENST00000584463 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
RFNG-210ENST00000584463 WDR62O43379 1518 aa23.67■■□□□ 1.38
RFNG-210ENST00000584463 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
RFNG-210ENST00000584463 ABCC8Q09428 1581 aa23.49■■□□□ 1.35
RFNG-210ENST00000584463 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
RFNG-210ENST00000584463 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
RFNG-210ENST00000584463 CUX1P39880 1505 aa23.36■■□□□ 1.33
RFNG-210ENST00000584463 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
RFNG-210ENST00000584463 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
RFNG-210ENST00000584463 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.32
RFNG-210ENST00000584463 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
RFNG-210ENST00000584463 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
RFNG-210ENST00000584463 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
RFNG-210ENST00000584463 SOGA1O94964 1423 aa23.2■■□□□ 1.3
RFNG-210ENST00000584463 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
RFNG-210ENST00000584463 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
RFNG-210ENST00000584463 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
RFNG-210ENST00000584463 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
RFNG-210ENST00000584463 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
RFNG-210ENST00000584463 AQRO60306 1485 aaKnown RBP eCLIP23.07■■□□□ 1.283e-11■■■□□ 18.1
RFNG-210ENST00000584463 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
RFNG-210ENST00000584463 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
RFNG-210ENST00000584463 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
RFNG-210ENST00000584463 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
RFNG-210ENST00000584463 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
RFNG-210ENST00000584463 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
RFNG-210ENST00000584463 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
RFNG-210ENST00000584463 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.25
RFNG-210ENST00000584463 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
RFNG-210ENST00000584463 DNAJC5Q9H3Z4 198 aa22.85■■□□□ 1.25
RFNG-210ENST00000584463 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
RFNG-210ENST00000584463 CHD1O14646 1710 aa22.8■■□□□ 1.24
RFNG-210ENST00000584463 FBLN2P98095 1184 aa22.8■■□□□ 1.24
RFNG-210ENST00000584463 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
RFNG-210ENST00000584463 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
RFNG-210ENST00000584463 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
RFNG-210ENST00000584463 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
RFNG-210ENST00000584463 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
RFNG-210ENST00000584463 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
RFNG-210ENST00000584463 FHAD1B1AJZ9 1412 aa22.69■■□□□ 1.22
RFNG-210ENST00000584463 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
RFNG-210ENST00000584463 IGF1RP08069 1367 aa22.63■■□□□ 1.21
RFNG-210ENST00000584463 CUL7Q14999 1698 aa22.61■■□□□ 1.21
RFNG-210ENST00000584463 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
RFNG-210ENST00000584463 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
RFNG-210ENST00000584463 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
RFNG-210ENST00000584463 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
RFNG-210ENST00000584463 NUP160Q12769 1436 aa22.51■■□□□ 1.19
RFNG-210ENST00000584463 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
RFNG-210ENST00000584463 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
RFNG-210ENST00000584463 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
RFNG-210ENST00000584463 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
RFNG-210ENST00000584463 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
RFNG-210ENST00000584463 EEA1Q15075 1411 aa22.42■■□□□ 1.18
RFNG-210ENST00000584463 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
RFNG-210ENST00000584463 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms