RNA–Protein interactions for RNA: ENST00000573826.5

PHF23-207, Transcript of PHD finger protein 23, humanhuman

TSL 3

Gene PHF23, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF23-207ENST00000573826 NISCHQ9Y2I1 1504 aa47.32■■■■■ 5.17
PHF23-207ENST00000573826 CCDC180Q9P1Z9 1646 aa42.06■■■■■ 4.32
PHF23-207ENST00000573826 ABCC9O60706 1549 aa40.72■■■■■ 4.11
PHF23-207ENST00000573826 ZCCHC6Q5VYS8 1495 aaKnown RBP39.49■■■■□ 3.91
PHF23-207ENST00000573826 NACADO15069 1562 aa39.44■■■■□ 3.9
PHF23-207ENST00000573826 RB1CC1Q8TDY2 1594 aa39.41■■■■□ 3.9
PHF23-207ENST00000573826 MYO15BQ96JP2 1530 aa39.34■■■■□ 3.89
PHF23-207ENST00000573826 DCAF8L2P0C7V8 631 aa39.25■■■■□ 3.87
PHF23-207ENST00000573826 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
PHF23-207ENST00000573826 UNC13AQ9UPW8 1703 aa38.52■■■■□ 3.76
PHF23-207ENST00000573826 SCRIBQ14160 1630 aa38.27■■■■□ 3.72
PHF23-207ENST00000573826 BICRAQ9NZM4 1560 aa38.17■■■■□ 3.7
PHF23-207ENST00000573826 PABPN1Q86U42 306 aaKnown RBP eCLIP38.03■■■■□ 3.68
PHF23-207ENST00000573826 SHROOM4Q9ULL8 1493 aa37.91■■■■□ 3.66
PHF23-207ENST00000573826 DNAJC5BQ9UF47 199 aa37.47■■■■□ 3.59
PHF23-207ENST00000573826 EIF4G1Q04637 1599 aaKnown RBP37.15■■■■□ 3.54
PHF23-207ENST00000573826 CC2D2AQ9P2K1 1620 aa36.92■■■■□ 3.5
PHF23-207ENST00000573826 CECR2Q9BXF3 1484 aa36.76■■■■□ 3.48
PHF23-207ENST00000573826 BAZ1AQ9NRL2 1556 aaPredicted RBP36.7■■■■□ 3.46
PHF23-207ENST00000573826 SMARCA4P51532 1647 aa36.68■■■■□ 3.46
PHF23-207ENST00000573826 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
PHF23-207ENST00000573826 SMARCA2P51531 1590 aa36.4■■■■□ 3.42
PHF23-207ENST00000573826 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
PHF23-207ENST00000573826 PEG3Q9GZU2 1588 aa36.37■■■■□ 3.41
PHF23-207ENST00000573826 NCAPD3P42695 1498 aa36.35■■■■□ 3.41
PHF23-207ENST00000573826 HMGXB3Q12766 1538 aa36.24■■■■□ 3.39
PHF23-207ENST00000573826 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
PHF23-207ENST00000573826 RSF1Q96T23 1441 aaPredicted RBP36.1■■■■□ 3.37
PHF23-207ENST00000573826 WIZO95785 1651 aa36.07■■■■□ 3.36
PHF23-207ENST00000573826 TOP2AP11388 1531 aaKnown RBP35.74■■■■□ 3.31
PHF23-207ENST00000573826 LAMC3Q9Y6N6 1575 aa35.39■■■■□ 3.26
PHF23-207ENST00000573826 NESP48681 1621 aa35.32■■■■□ 3.24
PHF23-207ENST00000573826 CADPSQ9ULU8 1353 aa35.27■■■■□ 3.24
PHF23-207ENST00000573826 SUPT5HO00267 1087 aaKnown RBP35.27■■■■□ 3.24
PHF23-207ENST00000573826 CCDC88BA6NC98 1476 aa35.27■■■■□ 3.24
PHF23-207ENST00000573826 CFTRP13569 1480 aa35.15■■■■□ 3.22
PHF23-207ENST00000573826 ERCC6Q03468 1493 aa35.11■■■■□ 3.21
PHF23-207ENST00000573826 PDS5BQ9NTI5 1447 aa35.09■■■■□ 3.21
PHF23-207ENST00000573826 PRDM2Q13029 1718 aa35■■■■□ 3.19
PHF23-207ENST00000573826 KIF21AQ7Z4S6 1674 aa34.98■■■■□ 3.19
PHF23-207ENST00000573826 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
PHF23-207ENST00000573826 CEP164Q9UPV0 1460 aa34.83■■■■□ 3.17
PHF23-207ENST00000573826 THOC2Q8NI27 1593 aaKnown RBP34.83■■■■□ 3.17
PHF23-207ENST00000573826 CUX2O14529 1486 aa34.72■■■■□ 3.15
PHF23-207ENST00000573826 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
PHF23-207ENST00000573826 WDR62O43379 1518 aa34.63■■■■□ 3.13
PHF23-207ENST00000573826 URB2Q14146 1524 aaKnown RBP34.5■■■■□ 3.11
PHF23-207ENST00000573826 ABCC8Q09428 1581 aa34.43■■■■□ 3.1
PHF23-207ENST00000573826 DNMBPQ6XZF7 1577 aa34.36■■■■□ 3.09
PHF23-207ENST00000573826 TOPBP1Q92547 1522 aa34.35■■■■□ 3.09
PHF23-207ENST00000573826 DNAJC5Q9H3Z4 198 aa34.3■■■■□ 3.08
PHF23-207ENST00000573826 CUX1P39880 1505 aa34.17■■■■□ 3.06
PHF23-207ENST00000573826 IFT140Q96RY7 1462 aa34.09■■■■□ 3.05
PHF23-207ENST00000573826 POLA1P09884 1462 aaPredicted RBP34.07■■■■□ 3.05
PHF23-207ENST00000573826 WRNQ14191 1432 aaPredicted RBP eCLIP34.05■■■■□ 3.04
PHF23-207ENST00000573826 FGD5Q6ZNL6 1462 aa34.02■■■■□ 3.04
PHF23-207ENST00000573826 BIVM-ERCC5R4GMW8 1640 aa34.02■■■■□ 3.04
PHF23-207ENST00000573826 TOP2BQ02880 1626 aa34■■■■□ 3.03
PHF23-207ENST00000573826 TARBP1Q13395 1621 aaKnown RBP33.99■■■■□ 3.03
PHF23-207ENST00000573826 SYNJ1O43426 1573 aa33.96■■■■□ 3.03
PHF23-207ENST00000573826 SOGA1O94964 1423 aa33.91■■■■□ 3.02
PHF23-207ENST00000573826 RAD54L2Q9Y4B4 1467 aa33.87■■■■□ 3.01
PHF23-207ENST00000573826 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
PHF23-207ENST00000573826 WDR97A6NE52 1622 aa33.82■■■■□ 3.01
PHF23-207ENST00000573826 EIF4G3O43432 1585 aaKnown RBP33.8■■■■□ 3
PHF23-207ENST00000573826 ABCA10Q8WWZ4 1543 aa33.74■■■□□ 2.99
PHF23-207ENST00000573826 AQRO60306 1485 aaKnown RBP eCLIP33.68■■■□□ 2.988e-8■■■■□ 25.8
PHF23-207ENST00000573826 TDRD9Q8NDG6 1382 aaKnown RBP33.64■■■□□ 2.98
PHF23-207ENST00000573826 ABCA5Q8WWZ7 1642 aa33.61■■■□□ 2.97
PHF23-207ENST00000573826 GAPVD1Q14C86 1478 aa33.55■■■□□ 2.96
PHF23-207ENST00000573826 GRIN2BQ13224 1484 aa33.52■■■□□ 2.96
PHF23-207ENST00000573826 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
PHF23-207ENST00000573826 MAGI1Q96QZ7 1491 aaPredicted RBP33.44■■■□□ 2.94
PHF23-207ENST00000573826 SNAPC4Q5SXM2 1469 aa33.42■■■□□ 2.94
PHF23-207ENST00000573826 TRIM41Q8WV44 630 aa33.36■■■□□ 2.93
PHF23-207ENST00000573826 ERICH3Q5RHP9 1530 aa33.36■■■□□ 2.93
PHF23-207ENST00000573826 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
PHF23-207ENST00000573826 CHD1O14646 1710 aa33.32■■■□□ 2.92
PHF23-207ENST00000573826 SYNJ2O15056 1496 aa33.28■■■□□ 2.92
PHF23-207ENST00000573826 ADAMTS12P58397 1594 aa33.26■■■□□ 2.91
PHF23-207ENST00000573826 OSCARQ8IYS5 282 aa33.24■■■□□ 2.91
PHF23-207ENST00000573826 FHAD1B1AJZ9 1412 aa33.19■■■□□ 2.9
PHF23-207ENST00000573826 FBLN2P98095 1184 aa33.17■■■□□ 2.9
PHF23-207ENST00000573826 CHMP7Q8WUX9 453 aaPredicted RBP33.17■■■□□ 2.9
PHF23-207ENST00000573826 CUL7Q14999 1698 aa33.13■■■□□ 2.89
PHF23-207ENST00000573826 IGF1RP08069 1367 aa33.12■■■□□ 2.89
PHF23-207ENST00000573826 CHIC1Q5VXU3 224 aa33.11■■■□□ 2.89
PHF23-207ENST00000573826 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
PHF23-207ENST00000573826 RUSC2Q8N2Y8 1516 aa33.03■■■□□ 2.88
PHF23-207ENST00000573826 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
PHF23-207ENST00000573826 NUP160Q12769 1436 aa32.94■■■□□ 2.86
PHF23-207ENST00000573826 CARMIL1Q5VZK9 1371 aa32.94■■■□□ 2.86
PHF23-207ENST00000573826 EEA1Q15075 1411 aa32.92■■■□□ 2.86
PHF23-207ENST00000573826 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
PHF23-207ENST00000573826 RAPGEF2Q9Y4G8 1499 aa32.81■■■□□ 2.84
PHF23-207ENST00000573826 PRXQ9BXM0 1461 aa32.76■■■□□ 2.84
PHF23-207ENST00000573826 ARHGEF11O15085 1522 aa32.75■■■□□ 2.83
PHF23-207ENST00000573826 CSRNP3Q8WYN3 585 aa32.73■■■□□ 2.83
PHF23-207ENST00000573826 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
PHF23-207ENST00000573826 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms