RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 NISCHQ9Y2I1 1504 aa46.04■■■■■ 4.96
KRTCAP3-201ENST00000288873 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
KRTCAP3-201ENST00000288873 ABCC9O60706 1549 aa39.54■■■■□ 3.92
KRTCAP3-201ENST00000288873 ZCCHC6Q5VYS8 1495 aaKnown RBP38.42■■■■□ 3.74
KRTCAP3-201ENST00000288873 DCAF8L2P0C7V8 631 aa38.38■■■■□ 3.73
KRTCAP3-201ENST00000288873 NACADO15069 1562 aa38.22■■■■□ 3.71
KRTCAP3-201ENST00000288873 RB1CC1Q8TDY2 1594 aa38.18■■■■□ 3.7
KRTCAP3-201ENST00000288873 MYO15BQ96JP2 1530 aa38.08■■■■□ 3.69
KRTCAP3-201ENST00000288873 DCAF1Q9Y4B6 1507 aa38.08■■■■□ 3.69
KRTCAP3-201ENST00000288873 UNC13AQ9UPW8 1703 aa37.34■■■■□ 3.57
KRTCAP3-201ENST00000288873 SCRIBQ14160 1630 aa37.25■■■■□ 3.55
KRTCAP3-201ENST00000288873 PABPN1Q86U42 306 aaKnown RBP eCLIP37.03■■■■□ 3.52
KRTCAP3-201ENST00000288873 BICRAQ9NZM4 1560 aa37.01■■■■□ 3.52
KRTCAP3-201ENST00000288873 DNAJC5BQ9UF47 199 aa36.99■■■■□ 3.51
KRTCAP3-201ENST00000288873 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
KRTCAP3-201ENST00000288873 EIF4G1Q04637 1599 aaKnown RBP36■■■■□ 3.35
KRTCAP3-201ENST00000288873 CECR2Q9BXF3 1484 aa35.84■■■■□ 3.33
KRTCAP3-201ENST00000288873 CC2D2AQ9P2K1 1620 aa35.77■■■■□ 3.32
KRTCAP3-201ENST00000288873 SMARCA4P51532 1647 aa35.65■■■■□ 3.3
KRTCAP3-201ENST00000288873 BAZ1AQ9NRL2 1556 aaPredicted RBP35.65■■■■□ 3.3
KRTCAP3-201ENST00000288873 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.27
KRTCAP3-201ENST00000288873 ATAD2BQ9ULI0 1458 aa35.35■■■■□ 3.25
KRTCAP3-201ENST00000288873 SMARCA2P51531 1590 aa35.32■■■■□ 3.24
KRTCAP3-201ENST00000288873 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
KRTCAP3-201ENST00000288873 NCAPD3P42695 1498 aa35.25■■■■□ 3.23
KRTCAP3-201ENST00000288873 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
KRTCAP3-201ENST00000288873 WIZO95785 1651 aa35.16■■■■□ 3.22
KRTCAP3-201ENST00000288873 HMGXB3Q12766 1538 aa35.11■■■■□ 3.21
KRTCAP3-201ENST00000288873 BAZ1BQ9UIG0 1483 aaKnown RBP35.09■■■■□ 3.21
KRTCAP3-201ENST00000288873 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
KRTCAP3-201ENST00000288873 SUPT5HO00267 1087 aaKnown RBP34.69■■■■□ 3.14
KRTCAP3-201ENST00000288873 CCDC88BA6NC98 1476 aa34.39■■■■□ 3.1
KRTCAP3-201ENST00000288873 NESP48681 1621 aa34.33■■■■□ 3.09
KRTCAP3-201ENST00000288873 LAMC3Q9Y6N6 1575 aa34.28■■■■□ 3.08
KRTCAP3-201ENST00000288873 CADPSQ9ULU8 1353 aa34.26■■■■□ 3.08
KRTCAP3-201ENST00000288873 CFTRP13569 1480 aa34.14■■■■□ 3.06
KRTCAP3-201ENST00000288873 ERCC6Q03468 1493 aa34.04■■■■□ 3.04
KRTCAP3-201ENST00000288873 PDS5BQ9NTI5 1447 aa34.04■■■■□ 3.04
KRTCAP3-201ENST00000288873 CUX2O14529 1486 aa34.02■■■■□ 3.04
KRTCAP3-201ENST00000288873 DNAJC5Q9H3Z4 198 aa33.99■■■■□ 3.03
KRTCAP3-201ENST00000288873 KIF21AQ7Z4S6 1674 aa33.94■■■■□ 3.02
KRTCAP3-201ENST00000288873 PRDM2Q13029 1718 aa33.93■■■■□ 3.02
KRTCAP3-201ENST00000288873 FANCD2Q9BXW9 1451 aa33.88■■■■□ 3.01
KRTCAP3-201ENST00000288873 CEP164Q9UPV0 1460 aa33.8■■■■□ 3
KRTCAP3-201ENST00000288873 THOC2Q8NI27 1593 aaKnown RBP33.7■■■□□ 2.99
KRTCAP3-201ENST00000288873 MRC2Q9UBG0 1479 aa33.67■■■□□ 2.98
KRTCAP3-201ENST00000288873 WDR62O43379 1518 aa33.53■■■□□ 2.96
KRTCAP3-201ENST00000288873 URB2Q14146 1524 aaKnown RBP33.52■■■□□ 2.96
KRTCAP3-201ENST00000288873 ABCC8Q09428 1581 aa33.38■■■□□ 2.93
KRTCAP3-201ENST00000288873 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
KRTCAP3-201ENST00000288873 DNMBPQ6XZF7 1577 aa33.38■■■□□ 2.93
KRTCAP3-201ENST00000288873 CUX1P39880 1505 aa33.28■■■□□ 2.92
KRTCAP3-201ENST00000288873 WRNQ14191 1432 aaPredicted RBP eCLIP33.21■■■□□ 2.91
KRTCAP3-201ENST00000288873 POLA1P09884 1462 aaPredicted RBP33.12■■■□□ 2.89
KRTCAP3-201ENST00000288873 SYNJ1O43426 1573 aa33.12■■■□□ 2.89
KRTCAP3-201ENST00000288873 FGD5Q6ZNL6 1462 aa33.11■■■□□ 2.89
KRTCAP3-201ENST00000288873 TOP2BQ02880 1626 aa33.1■■■□□ 2.89
KRTCAP3-201ENST00000288873 BIVM-ERCC5R4GMW8 1640 aa33.1■■■□□ 2.89
KRTCAP3-201ENST00000288873 IFT140Q96RY7 1462 aa33.06■■■□□ 2.88
KRTCAP3-201ENST00000288873 SOGA1O94964 1423 aa33.01■■■□□ 2.87
KRTCAP3-201ENST00000288873 RAD54L2Q9Y4B4 1467 aa32.99■■■□□ 2.87
KRTCAP3-201ENST00000288873 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
KRTCAP3-201ENST00000288873 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
KRTCAP3-201ENST00000288873 WDR97A6NE52 1622 aa32.81■■■□□ 2.84
KRTCAP3-201ENST00000288873 ABCA10Q8WWZ4 1543 aa32.79■■■□□ 2.84
KRTCAP3-201ENST00000288873 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
KRTCAP3-201ENST00000288873 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
KRTCAP3-201ENST00000288873 AQRO60306 1485 aaKnown RBP eCLIP32.78■■■□□ 2.84
KRTCAP3-201ENST00000288873 TRIM41Q8WV44 630 aa32.74■■■□□ 2.83
KRTCAP3-201ENST00000288873 ABCA5Q8WWZ7 1642 aa32.63■■■□□ 2.81
KRTCAP3-201ENST00000288873 GAPVD1Q14C86 1478 aa32.63■■■□□ 2.81
KRTCAP3-201ENST00000288873 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
KRTCAP3-201ENST00000288873 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
KRTCAP3-201ENST00000288873 PBRM1Q86U86 1689 aa32.55■■■□□ 2.8
KRTCAP3-201ENST00000288873 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
KRTCAP3-201ENST00000288873 SNAPC4Q5SXM2 1469 aa32.47■■■□□ 2.79
KRTCAP3-201ENST00000288873 OSCARQ8IYS5 282 aa32.46■■■□□ 2.79
KRTCAP3-201ENST00000288873 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
KRTCAP3-201ENST00000288873 ERICH3Q5RHP9 1530 aa32.41■■■□□ 2.78
KRTCAP3-201ENST00000288873 FBLN2P98095 1184 aa32.34■■■□□ 2.77
KRTCAP3-201ENST00000288873 RUSC2Q8N2Y8 1516 aa32.34■■■□□ 2.77
KRTCAP3-201ENST00000288873 CHD1O14646 1710 aa32.31■■■□□ 2.76
KRTCAP3-201ENST00000288873 IGF1RP08069 1367 aa32.31■■■□□ 2.76
KRTCAP3-201ENST00000288873 SYNJ2O15056 1496 aa32.3■■■□□ 2.76
KRTCAP3-201ENST00000288873 ADAMTS12P58397 1594 aa32.29■■■□□ 2.76
KRTCAP3-201ENST00000288873 CHMP7Q8WUX9 453 aaPredicted RBP32.28■■■□□ 2.76
KRTCAP3-201ENST00000288873 FHAD1B1AJZ9 1412 aa32.26■■■□□ 2.75
KRTCAP3-201ENST00000288873 CUL7Q14999 1698 aa32.2■■■□□ 2.74
KRTCAP3-201ENST00000288873 GRIN2AQ12879 1464 aa32.15■■■□□ 2.74
KRTCAP3-201ENST00000288873 CARMIL1Q5VZK9 1371 aa32.13■■■□□ 2.73
KRTCAP3-201ENST00000288873 EEA1Q15075 1411 aa32.11■■■□□ 2.73
KRTCAP3-201ENST00000288873 FAM9AQ8IZU1 332 aaPredicted RBP32.08■■■□□ 2.73
KRTCAP3-201ENST00000288873 CSRNP3Q8WYN3 585 aa32.04■■■□□ 2.72
KRTCAP3-201ENST00000288873 RIMBP3CA6NJZ7 1639 aa32.01■■■□□ 2.72
KRTCAP3-201ENST00000288873 RIMBP3BA6NNM3 1639 aa32.01■■■□□ 2.72
KRTCAP3-201ENST00000288873 RIMBP3Q9UFD9 1639 aa32.01■■■□□ 2.72
KRTCAP3-201ENST00000288873 RAPGEF2Q9Y4G8 1499 aa31.98■■■□□ 2.71
KRTCAP3-201ENST00000288873 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
KRTCAP3-201ENST00000288873 NUP160Q12769 1436 aa31.97■■■□□ 2.71
KRTCAP3-201ENST00000288873 PRXQ9BXM0 1461 aa31.95■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms