RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
GPHN-206ENST00000553936 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
GPHN-206ENST00000553936 ABCC9O60706 1549 aa15.48■□□□□ 0.07
GPHN-206ENST00000553936 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
GPHN-206ENST00000553936 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
GPHN-206ENST00000553936 DNAJC5BQ9UF47 199 aa14.75□□□□□ -0.05
GPHN-206ENST00000553936 RB1CC1Q8TDY2 1594 aa14.65□□□□□ -0.06
GPHN-206ENST00000553936 NACADO15069 1562 aa14.47□□□□□ -0.09
GPHN-206ENST00000553936 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
GPHN-206ENST00000553936 DCAF8L2P0C7V8 631 aa14.34□□□□□ -0.11
GPHN-206ENST00000553936 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
GPHN-206ENST00000553936 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
GPHN-206ENST00000553936 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
GPHN-206ENST00000553936 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
GPHN-206ENST00000553936 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
GPHN-206ENST00000553936 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
GPHN-206ENST00000553936 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
GPHN-206ENST00000553936 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
GPHN-206ENST00000553936 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
GPHN-206ENST00000553936 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
GPHN-206ENST00000553936 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
GPHN-206ENST00000553936 CUX2O14529 1486 aa13.55□□□□□ -0.24
GPHN-206ENST00000553936 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
GPHN-206ENST00000553936 NCAPD3P42695 1498 aa13.35□□□□□ -0.27
GPHN-206ENST00000553936 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
GPHN-206ENST00000553936 ATAD2BQ9ULI0 1458 aa13.24□□□□□ -0.29
GPHN-206ENST00000553936 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
GPHN-206ENST00000553936 HMGXB3Q12766 1538 aa13.22□□□□□ -0.29
GPHN-206ENST00000553936 NESP48681 1621 aa13.17□□□□□ -0.3
GPHN-206ENST00000553936 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
GPHN-206ENST00000553936 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
GPHN-206ENST00000553936 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
GPHN-206ENST00000553936 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
GPHN-206ENST00000553936 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
GPHN-206ENST00000553936 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
GPHN-206ENST00000553936 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
GPHN-206ENST00000553936 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
GPHN-206ENST00000553936 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
GPHN-206ENST00000553936 KIF21AQ7Z4S6 1674 aa12.99□□□□□ -0.33
GPHN-206ENST00000553936 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
GPHN-206ENST00000553936 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
GPHN-206ENST00000553936 WDR62O43379 1518 aa12.91□□□□□ -0.34
GPHN-206ENST00000553936 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
GPHN-206ENST00000553936 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
GPHN-206ENST00000553936 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
GPHN-206ENST00000553936 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
GPHN-206ENST00000553936 CFTRP13569 1480 aa12.71□□□□□ -0.38
GPHN-206ENST00000553936 WIZO95785 1651 aa12.7□□□□□ -0.38
GPHN-206ENST00000553936 RIMBP3CA6NJZ7 1639 aa12.67□□□□□ -0.38
GPHN-206ENST00000553936 RIMBP3BA6NNM3 1639 aa12.67□□□□□ -0.38
GPHN-206ENST00000553936 RIMBP3Q9UFD9 1639 aa12.67□□□□□ -0.38
GPHN-206ENST00000553936 URB2Q14146 1524 aaKnown RBP12.65□□□□□ -0.38
GPHN-206ENST00000553936 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
GPHN-206ENST00000553936 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
GPHN-206ENST00000553936 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
GPHN-206ENST00000553936 CYB5RLQ6IPT4 315 aa12.58□□□□□ -0.4
GPHN-206ENST00000553936 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
GPHN-206ENST00000553936 ZNF608Q9ULD9 1512 aaPredicted RBP12.54□□□□□ -0.4
GPHN-206ENST00000553936 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
GPHN-206ENST00000553936 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.41
GPHN-206ENST00000553936 PRDM2Q13029 1718 aa12.51□□□□□ -0.41
GPHN-206ENST00000553936 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
GPHN-206ENST00000553936 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
GPHN-206ENST00000553936 FBLN2P98095 1184 aa12.46□□□□□ -0.41
GPHN-206ENST00000553936 ARAP1Q96P48 1450 aa12.46□□□□□ -0.42
GPHN-206ENST00000553936 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
GPHN-206ENST00000553936 CHD1O14646 1710 aa12.42□□□□□ -0.42
GPHN-206ENST00000553936 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.42
GPHN-206ENST00000553936 AQRO60306 1485 aaKnown RBP eCLIP12.4□□□□□ -0.42
GPHN-206ENST00000553936 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
GPHN-206ENST00000553936 FOXD1Q16676 465 aa12.35□□□□□ -0.43
GPHN-206ENST00000553936 CHMP7Q8WUX9 453 aaPredicted RBP12.34□□□□□ -0.43
GPHN-206ENST00000553936 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
GPHN-206ENST00000553936 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
GPHN-206ENST00000553936 WDR97A6NE52 1622 aa12.31□□□□□ -0.44
GPHN-206ENST00000553936 SOGA1O94964 1423 aa12.3□□□□□ -0.44
GPHN-206ENST00000553936 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
GPHN-206ENST00000553936 SNAPC4Q5SXM2 1469 aa12.29□□□□□ -0.44
GPHN-206ENST00000553936 CLASP1Q7Z460 1538 aa12.29□□□□□ -0.44
GPHN-206ENST00000553936 MAGI1Q96QZ7 1491 aaPredicted RBP12.28□□□□□ -0.44
GPHN-206ENST00000553936 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.44
GPHN-206ENST00000553936 SYNJ2O15056 1496 aa12.24□□□□□ -0.45
GPHN-206ENST00000553936 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
GPHN-206ENST00000553936 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
GPHN-206ENST00000553936 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.45
GPHN-206ENST00000553936 CUX1P39880 1505 aa12.12□□□□□ -0.47
GPHN-206ENST00000553936 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
GPHN-206ENST00000553936 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
GPHN-206ENST00000553936 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
GPHN-206ENST00000553936 GRIN2AQ12879 1464 aa12.07□□□□□ -0.48
GPHN-206ENST00000553936 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
GPHN-206ENST00000553936 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
GPHN-206ENST00000553936 NUP160Q12769 1436 aa12.03□□□□□ -0.48
GPHN-206ENST00000553936 ERCC6L2Q5T890 1561 aa12.02□□□□□ -0.49
GPHN-206ENST00000553936 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
GPHN-206ENST00000553936 FHAD1B1AJZ9 1412 aa12□□□□□ -0.49
GPHN-206ENST00000553936 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
GPHN-206ENST00000553936 ADAMTS12P58397 1594 aa12□□□□□ -0.49
GPHN-206ENST00000553936 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
GPHN-206ENST00000553936 FAM69CQ0P6D2 419 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms