Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RBM28Q9NW13 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RBM28Q9NW13 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
RBM28Q9NW13 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
RBM28Q9NW13 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RBM28Q9NW13 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.24■■■□□ 2.43
RBM28Q9NW13 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RBM28Q9NW13 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
RBM28Q9NW13 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.2■■■□□ 2.42
RBM28Q9NW13 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RBM28Q9NW13 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RBM28Q9NW13 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.19■■■□□ 2.42
RBM28Q9NW13 ABCB10P3-201ENST00000561950 2166 ntBASIC30.19■■■□□ 2.42
RBM28Q9NW13 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RBM28Q9NW13 DUX4L29-201ENST00000425409 679 ntBASIC30.18■■■□□ 2.42
RBM28Q9NW13 AL139393.2-201ENST00000608721 2025 ntBASIC30.17■■■□□ 2.42
RBM28Q9NW13 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RBM28Q9NW13 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RBM28Q9NW13 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RBM28Q9NW13 AC021231.2-201ENST00000594613 730 ntBASIC30.16■■■□□ 2.42
RBM28Q9NW13 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
RBM28Q9NW13 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
RBM28Q9NW13 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
RBM28Q9NW13 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.14■■■□□ 2.42
RBM28Q9NW13 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RBM28Q9NW13 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RBM28Q9NW13 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
RBM28Q9NW13 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RBM28Q9NW13 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RBM28Q9NW13 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RBM28Q9NW13 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RBM28Q9NW13 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RBM28Q9NW13 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
RBM28Q9NW13 AP004833.2-201ENST00000532228 1454 ntBASIC30.12■■■□□ 2.41
RBM28Q9NW13 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RBM28Q9NW13 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.11■■■□□ 2.41
RBM28Q9NW13 LINC00273-201ENST00000539813 1452 ntBASIC30.11■■■□□ 2.41
RBM28Q9NW13 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.1■■■□□ 2.41
RBM28Q9NW13 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.1■■■□□ 2.41
RBM28Q9NW13 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.1■■■□□ 2.41
RBM28Q9NW13 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.1■■■□□ 2.41
RBM28Q9NW13 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
RBM28Q9NW13 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
RBM28Q9NW13 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
RBM28Q9NW13 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.09■■■□□ 2.41
RBM28Q9NW13 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.09■■■□□ 2.41
RBM28Q9NW13 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RBM28Q9NW13 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
RBM28Q9NW13 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
RBM28Q9NW13 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.08■■■□□ 2.41
RBM28Q9NW13 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.08■■■□□ 2.41
RBM28Q9NW13 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.08■■■□□ 2.41
RBM28Q9NW13 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.07■■■□□ 2.4
RBM28Q9NW13 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
RBM28Q9NW13 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.06■■■□□ 2.4
RBM28Q9NW13 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RBM28Q9NW13 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RBM28Q9NW13 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RBM28Q9NW13 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RBM28Q9NW13 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RBM28Q9NW13 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RBM28Q9NW13 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
RBM28Q9NW13 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RBM28Q9NW13 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RBM28Q9NW13 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.03■■■□□ 2.4
RBM28Q9NW13 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
RBM28Q9NW13 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RBM28Q9NW13 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.03■■■□□ 2.4
RBM28Q9NW13 AC135983.2-203ENST00000454486 1613 ntBASIC30.03■■■□□ 2.4
RBM28Q9NW13 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RBM28Q9NW13 AC139426.1-201ENST00000568218 2529 ntBASIC30.01■■■□□ 2.39
RBM28Q9NW13 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30■■■□□ 2.39
RBM28Q9NW13 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30■■■□□ 2.39
RBM28Q9NW13 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30■■■□□ 2.39
RBM28Q9NW13 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RBM28Q9NW13 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30■■■□□ 2.39
RBM28Q9NW13 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RBM28Q9NW13 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30■■■□□ 2.39
RBM28Q9NW13 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.99■■■□□ 2.39
RBM28Q9NW13 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RBM28Q9NW13 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.98■■■□□ 2.39
RBM28Q9NW13 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RBM28Q9NW13 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RBM28Q9NW13 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
RBM28Q9NW13 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.98■■■□□ 2.39
RBM28Q9NW13 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.98■■■□□ 2.39
RBM28Q9NW13 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
RBM28Q9NW13 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
RBM28Q9NW13 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
RBM28Q9NW13 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.96■■■□□ 2.39
RBM28Q9NW13 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
RBM28Q9NW13 WHAMMP2-203ENST00000563942 1603 ntBASIC29.96■■■□□ 2.39
RBM28Q9NW13 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.95■■■□□ 2.39
RBM28Q9NW13 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
RBM28Q9NW13 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
RBM28Q9NW13 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RBM28Q9NW13 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RBM28Q9NW13 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RBM28Q9NW13 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.94■■■□□ 2.38
RBM28Q9NW13 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms