Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
SNX25Q9H3E2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNX25Q9H3E2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNX25Q9H3E2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.74■■■□□ 2.03
SNX25Q9H3E2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNX25Q9H3E2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SNX25Q9H3E2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.73■■■□□ 2.03
SNX25Q9H3E2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.72■■■□□ 2.03
SNX25Q9H3E2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNX25Q9H3E2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNX25Q9H3E2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.71■■■□□ 2.03
SNX25Q9H3E2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.71■■■□□ 2.03
SNX25Q9H3E2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
SNX25Q9H3E2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SNX25Q9H3E2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SNX25Q9H3E2 ABCB10P1-201ENST00000614297 2181 ntBASIC27.69■■■□□ 2.02
SNX25Q9H3E2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SNX25Q9H3E2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.68■■■□□ 2.02
SNX25Q9H3E2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNX25Q9H3E2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.68■■■□□ 2.02
SNX25Q9H3E2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.68■■■□□ 2.02
SNX25Q9H3E2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.67■■■□□ 2.02
SNX25Q9H3E2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.67■■■□□ 2.02
SNX25Q9H3E2 LINC00273-201ENST00000539813 1452 ntBASIC27.67■■■□□ 2.02
SNX25Q9H3E2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.66■■■□□ 2.02
SNX25Q9H3E2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNX25Q9H3E2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNX25Q9H3E2 LINC01971-201ENST00000617888 1048 ntBASIC27.65■■■□□ 2.02
SNX25Q9H3E2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.64■■■□□ 2.02
SNX25Q9H3E2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
SNX25Q9H3E2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.64■■■□□ 2.02
SNX25Q9H3E2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SNX25Q9H3E2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SNX25Q9H3E2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNX25Q9H3E2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SNX25Q9H3E2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
SNX25Q9H3E2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.62■■■□□ 2.01
SNX25Q9H3E2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.62■■■□□ 2.01
SNX25Q9H3E2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.62■■■□□ 2.01
SNX25Q9H3E2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNX25Q9H3E2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SNX25Q9H3E2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNX25Q9H3E2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.6■■■□□ 2.01
SNX25Q9H3E2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
SNX25Q9H3E2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SNX25Q9H3E2 DUX4L11-201ENST00000611504 1267 ntBASIC27.59■■■□□ 2.01
SNX25Q9H3E2 DUX4L12-201ENST00000614593 1267 ntBASIC27.59■■■□□ 2.01
SNX25Q9H3E2 DUX4L14-201ENST00000621227 1267 ntBASIC27.59■■■□□ 2.01
SNX25Q9H3E2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.58■■■□□ 2.01
SNX25Q9H3E2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.58■■■□□ 2.01
SNX25Q9H3E2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
SNX25Q9H3E2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNX25Q9H3E2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNX25Q9H3E2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNX25Q9H3E2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
SNX25Q9H3E2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
SNX25Q9H3E2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.56■■■□□ 2
SNX25Q9H3E2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
SNX25Q9H3E2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.55■■■□□ 2
SNX25Q9H3E2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.55■■■□□ 2
SNX25Q9H3E2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
SNX25Q9H3E2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
SNX25Q9H3E2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SNX25Q9H3E2 AC135983.2-203ENST00000454486 1613 ntBASIC27.54■■■□□ 2
SNX25Q9H3E2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
SNX25Q9H3E2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.53■■■□□ 2
SNX25Q9H3E2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SNX25Q9H3E2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SNX25Q9H3E2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SNX25Q9H3E2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
SNX25Q9H3E2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.52■■■□□ 2
SNX25Q9H3E2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SNX25Q9H3E2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.52■■■□□ 2
SNX25Q9H3E2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.52■■■□□ 2
SNX25Q9H3E2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SNX25Q9H3E2 WHAMMP2-203ENST00000563942 1603 ntBASIC27.51■■□□□ 1.99
SNX25Q9H3E2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SNX25Q9H3E2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNX25Q9H3E2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNX25Q9H3E2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.49■■□□□ 1.99
SNX25Q9H3E2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.49■■□□□ 1.99
SNX25Q9H3E2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SNX25Q9H3E2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNX25Q9H3E2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNX25Q9H3E2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNX25Q9H3E2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.48■■□□□ 1.99
SNX25Q9H3E2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNX25Q9H3E2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.47■■□□□ 1.99
SNX25Q9H3E2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNX25Q9H3E2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNX25Q9H3E2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L13-201ENST00000554103 1267 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L15-201ENST00000611059 1267 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L23-201ENST00000615195 1269 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L24-201ENST00000617576 1269 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L22-201ENST00000618238 1269 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L20-201ENST00000619712 1269 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L21-201ENST00000622058 1269 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L10-201ENST00000622460 1267 ntBASIC27.47■■□□□ 1.99
SNX25Q9H3E2 DUX4L25-201ENST00000624915 1269 ntBASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms